RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 NIT1Q86X76 327 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 RHPN1-AS1Q9BWJ2 59 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 FRMPD3Q5JV73 1810 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 SRSF4Q08170 494 aaKnown RBP6.43□□□□□ -1.38
CTNND1-207ENST00000426142 LCN12Q6JVE5 192 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 Q6ZRM9 215 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 CHTOPQ9Y3Y2 248 aaKnown RBP6.43□□□□□ -1.38
CTNND1-207ENST00000426142 TRBV6-6A0A0A6YYG2 114 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 SH2D1AO60880 128 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 PRTN3P24158 256 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 NPC2P61916 151 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 TMEM14EPQ6UXP3 125 aa6.43□□□□□ -1.38
CTNND1-207ENST00000426142 ATP6V0E1O15342 81 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 GLRX5Q86SX6 157 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 FAM169BQ8N8A8 192 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 PEF1Q9UBV8 284 aaKnown RBP6.42□□□□□ -1.38
CTNND1-207ENST00000426142 DIDO1Q9BTC0 2240 aaKnown RBP6.42□□□□□ -1.38
CTNND1-207ENST00000426142 C15orf62A8K5M9 175 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 D6R8Y8 96 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 E9PQ18 207 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 F2Z2F3 143 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 TANC1Q9C0D5 1861 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 TRAV2A0A0B4J234 112 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 FAM223BA6NKX1 122 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 RNASE2P10153 161 aaKnown RBP6.42□□□□□ -1.38
CTNND1-207ENST00000426142 ZNF138P52744 262 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 ASCL4Q6XD76 172 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 FAM223AQ8IWN6 122 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 GPR179Q6PRD1 2367 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 CD300EQ496F6 205 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-207ENST00000426142 IGFL3Q6UXB1 125 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 DMRTC2Q8IXT2 367 aaPredicted RBP6.42□□□□□ -1.38
CTNND1-207ENST00000426142 USMG5Q96IX5 58 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 PRADC1Q9BSG0 188 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 IGKV1-6A0A0C4DH72 117 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 A0A1W2PPI3 338 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 G3V318 75 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 IGHV4-39P01824 125 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 CXCL1P09341 107 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 RNF182Q8N6D2 247 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 PGPEP1Q9NXJ5 209 aa6.42□□□□□ -1.38
CTNND1-207ENST00000426142 LRRK1Q38SD2 2015 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 RBMY1BA6NDE4 496 aaKnown RBP6.41□□□□□ -1.38
CTNND1-207ENST00000426142 RBMY1EA6NEQ0 496 aaKnown RBP6.41□□□□□ -1.38
CTNND1-207ENST00000426142 TSPAN13O95857 204 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 TOMM40O96008 361 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 RBMY1DP0C7P1 496 aaKnown RBP6.41□□□□□ -1.38
CTNND1-207ENST00000426142 RBMY1A1P0DJD3 496 aaKnown RBP6.41□□□□□ -1.38
CTNND1-207ENST00000426142 RBMY1CP0DJD4 496 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 ZNF876PQ49A33 203 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 WDR86Q86TI4 376 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 NXT2Q9NPJ8 142 aaKnown RBP6.41□□□□□ -1.38
CTNND1-207ENST00000426142 CDK2AP2O75956 126 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 DPM2O94777 84 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 GATA4P43694 442 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 GNB1LQ9BYB4 327 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 PRDM13Q9H4Q3 707 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 K7EM74 188 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 NDUFS8O00217 210 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 PSG3Q16557 428 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 ORMDL2Q53FV1 153 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 DTX1Q86Y01 620 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 SPTBN1Q01082 2364 aaKnown RBP6.41□□□□□ -1.38
CTNND1-207ENST00000426142 A0A087WWL8 130 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 A0A087WX48 190 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 UBE2E1P51965 193 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 C9orf139Q6ZV77 190 aa6.41□□□□□ -1.38
CTNND1-207ENST00000426142 C14orf178Q8N769 122 aaPredicted RBP6.41□□□□□ -1.38
CTNND1-207ENST00000426142 HIST1H2BKO60814 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST1H2BJP06899 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 DEFB130BP0DP73 79 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 DEFB130AP0DP74 79 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST1H2BOP23527 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST1H2BBP33778 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST1H2BDP58876 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST1H2BCP62807 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST2H2BEQ16778 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.4□□□□□ -1.38
CTNND1-207ENST00000426142 C1orf122Q6ZSJ8 110 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST1H2BHQ93079 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST1H2BNQ99877 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 HIST1H2BMQ99879 126 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 FAM215AQ9Y5M1 114 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 ROS1P08922 2347 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 IGHV1-69DA0A0B4J2H0 117 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 IGHV1-69P01742 117 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 DTX2Q86UW9 622 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 IGKCP01834 107 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 CEACAM8P31997 349 aaPredicted RBP6.4□□□□□ -1.38
CTNND1-207ENST00000426142 DEFB131AP59861 70 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 LAGE3Q14657 143 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 PHLDA1Q8WV24 401 aaPredicted RBP6.4□□□□□ -1.38
CTNND1-207ENST00000426142 LINC00479Q96M42 142 aa6.4□□□□□ -1.38
CTNND1-207ENST00000426142 DAZ1Q9NQZ3 744 aaKnown RBP6.4□□□□□ -1.38
CTNND1-207ENST00000426142 A0A1B0GWB2 263 aa6.4□□□□□ -1.39
CTNND1-207ENST00000426142 SMKR1H3BMG3 65 aa6.4□□□□□ -1.39
CTNND1-207ENST00000426142 PPBPP02775 128 aa6.4□□□□□ -1.39
CTNND1-207ENST00000426142 PRB1P04280 392 aa6.4□□□□□ -1.39
CTNND1-207ENST00000426142 GRNP28799 593 aaKnown RBP6.4□□□□□ -1.39
CTNND1-207ENST00000426142 CFHR3Q02985 330 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms