RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 LGALSLQ3ZCW2 172 aaPredicted RBP22.87■■□□□ 1.25
CSNK1E-206ENST00000413574 TMUB2Q71RG4 321 aa22.87■■□□□ 1.25
CSNK1E-206ENST00000413574 Q8N1Y9 231 aa22.87■■□□□ 1.25
CSNK1E-206ENST00000413574 HYLS1Q96M11 299 aa22.87■■□□□ 1.25
CSNK1E-206ENST00000413574 SMAD5-AS1Q9Y6J3 95 aa22.87■■□□□ 1.25
CSNK1E-206ENST00000413574 TRAV5A0A0B4J249 113 aa22.86■■□□□ 1.25
CSNK1E-206ENST00000413574 DNASE2O00115 360 aaPredicted RBP22.86■■□□□ 1.25
CSNK1E-206ENST00000413574 S100A7P31151 101 aa22.86■■□□□ 1.25
CSNK1E-206ENST00000413574 TIMM9Q9Y5J7 89 aa22.86■■□□□ 1.25
CSNK1E-206ENST00000413574 PAFAH1B2P68402 229 aa22.86■■□□□ 1.25
CSNK1E-206ENST00000413574 ZFP69Q49AA0 526 aa22.86■■□□□ 1.25
CSNK1E-206ENST00000413574 SPATA31B1PQ5VZV4 182 aa22.86■■□□□ 1.25
CSNK1E-206ENST00000413574 GTSCR1Q86UQ5 136 aa22.86■■□□□ 1.25
CSNK1E-206ENST00000413574 GATAD1Q8WUU5 269 aa22.86■■□□□ 1.25
CSNK1E-206ENST00000413574 OR4C46A6NHA9 309 aa22.85■■□□□ 1.25
CSNK1E-206ENST00000413574 JTBO76095 146 aa22.85■■□□□ 1.25
CSNK1E-206ENST00000413574 S100A7AQ86SG5 101 aa22.85■■□□□ 1.25
CSNK1E-206ENST00000413574 FAM24BQ8N5W8 94 aa22.85■■□□□ 1.25
CSNK1E-206ENST00000413574 SEPSECSQ9HD40 501 aaKnown RBP22.85■■□□□ 1.25
CSNK1E-206ENST00000413574 BCL2L11O43521 198 aa22.84■■□□□ 1.25
CSNK1E-206ENST00000413574 FAM78BQ5VT40 261 aa22.84■■□□□ 1.25
CSNK1E-206ENST00000413574 DCANP1Q8TF63 244 aa22.84■■□□□ 1.25
CSNK1E-206ENST00000413574 WFDC10AQ9H1F0 79 aa22.84■■□□□ 1.25
CSNK1E-206ENST00000413574 UBQLN2Q9UHD9 624 aa22.84■■□□□ 1.25
CSNK1E-206ENST00000413574 KANTRA0A1W2PQU2 76 aa22.83■■□□□ 1.25
CSNK1E-206ENST00000413574 C17orf77Q96MU5 243 aa22.83■■□□□ 1.25
CSNK1E-206ENST00000413574 NRN1Q9NPD7 142 aa22.83■■□□□ 1.25
CSNK1E-206ENST00000413574 PFDN1O60925 122 aa22.82■■□□□ 1.24
CSNK1E-206ENST00000413574 PSMG3Q9BT73 122 aaPredicted RBP22.82■■□□□ 1.24
CSNK1E-206ENST00000413574 K7EQG2 157 aa22.82■■□□□ 1.24
CSNK1E-206ENST00000413574 SNRPCP09234 159 aaKnown RBP22.82■■□□□ 1.24
CSNK1E-206ENST00000413574 GALR1P47211 349 aa22.82■■□□□ 1.24
CSNK1E-206ENST00000413574 MIR17HGQ75NE6 70 aa22.82■■□□□ 1.24
CSNK1E-206ENST00000413574 RAB2AP61019 212 aa22.81■■□□□ 1.24
CSNK1E-206ENST00000413574 GPR82Q96P67 336 aa22.81■■□□□ 1.24
CSNK1E-206ENST00000413574 ZNF471Q9BX82 626 aaPredicted RBP22.81■■□□□ 1.24
CSNK1E-206ENST00000413574 C19orf73Q9NVV2 129 aa22.81■■□□□ 1.24
CSNK1E-206ENST00000413574 MRPS12O15235 138 aaKnown RBP22.8■■□□□ 1.24
CSNK1E-206ENST00000413574 EIF3GO75821 320 aaKnown RBP eCLIP22.8■■□□□ 1.24
CSNK1E-206ENST00000413574 RPL7P18124 248 aaKnown RBP22.8■■□□□ 1.24
CSNK1E-206ENST00000413574 ODF3L2Q3SX64 289 aa22.8■■□□□ 1.24
CSNK1E-206ENST00000413574 OR2G3Q8NGZ4 309 aa22.8■■□□□ 1.24
CSNK1E-206ENST00000413574 GNPNAT1Q96EK6 184 aaPredicted RBP22.8■■□□□ 1.24
CSNK1E-206ENST00000413574 TRAV2A0A0B4J234 112 aa22.79■■□□□ 1.24
CSNK1E-206ENST00000413574 NKX2-5P52952 324 aaPredicted RBP22.79■■□□□ 1.24
CSNK1E-206ENST00000413574 C9orf62Q8N4C0 152 aa22.79■■□□□ 1.24
CSNK1E-206ENST00000413574 M6PRP20645 277 aa22.78■■□□□ 1.24
CSNK1E-206ENST00000413574 ACOT6Q3I5F7 207 aaPredicted RBP22.78■■□□□ 1.24
CSNK1E-206ENST00000413574 DEFB121Q5J5C9 76 aa22.78■■□□□ 1.24
CSNK1E-206ENST00000413574 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa22.78■■□□□ 1.24
CSNK1E-206ENST00000413574 DEFB125Q8N687 156 aa22.78■■□□□ 1.24
CSNK1E-206ENST00000413574 MRAPQ8TCY5 172 aa22.78■■□□□ 1.24
CSNK1E-206ENST00000413574 FUT9Q9Y231 359 aa22.78■■□□□ 1.24
CSNK1E-206ENST00000413574 PRKDCP78527 4128 aaKnown RBP22.78■■□□□ 1.24
CSNK1E-206ENST00000413574 OR11H12B2RN74 326 aa22.77■■□□□ 1.24
CSNK1E-206ENST00000413574 ATF4P18848 351 aaPredicted RBP22.77■■□□□ 1.24
CSNK1E-206ENST00000413574 BPIFA4PQ86YQ2 179 aa22.77■■□□□ 1.24
CSNK1E-206ENST00000413574 SLC25A2Q9BXI2 301 aa22.77■■□□□ 1.24
CSNK1E-206ENST00000413574 MAP6D1Q9H9H5 199 aa22.77■■□□□ 1.24
CSNK1E-206ENST00000413574 RNF24Q9Y225 148 aa22.77■■□□□ 1.24
CSNK1E-206ENST00000413574 ZNF688P0C7X2 276 aa22.76■■□□□ 1.23
CSNK1E-206ENST00000413574 SERF2P84101 59 aa22.76■■□□□ 1.23
CSNK1E-206ENST00000413574 ZNF124Q15973 351 aa22.76■■□□□ 1.23
CSNK1E-206ENST00000413574 OR10G4Q8NGN3 311 aa22.76■■□□□ 1.23
CSNK1E-206ENST00000413574 OR10G9Q8NGN4 311 aa22.76■■□□□ 1.23
CSNK1E-206ENST00000413574 OR10G7Q8NGN6 311 aa22.76■■□□□ 1.23
CSNK1E-206ENST00000413574 APRG1Q8IVJ8 170 aa22.75■■□□□ 1.23
CSNK1E-206ENST00000413574 FAM167A-AS1Q96KT0 104 aa22.75■■□□□ 1.23
CSNK1E-206ENST00000413574 MRPL32Q9BYC8 188 aaKnown RBP22.75■■□□□ 1.23
CSNK1E-206ENST00000413574 H3BTX0 84 aa22.75■■□□□ 1.23
CSNK1E-206ENST00000413574 SOCS3O14543 225 aa22.75■■□□□ 1.23
CSNK1E-206ENST00000413574 RHOBP62745 196 aa22.75■■□□□ 1.23
CSNK1E-206ENST00000413574 FAM122CQ6P4D5 195 aa22.75■■□□□ 1.23
CSNK1E-206ENST00000413574 PYYP10082 97 aa22.74■■□□□ 1.23
CSNK1E-206ENST00000413574 SPP1P10451 314 aa22.74■■□□□ 1.23
CSNK1E-206ENST00000413574 H3BQ15 152 aa22.73■■□□□ 1.23
CSNK1E-206ENST00000413574 IGHV4-30-4P0DP06 118 aa22.73■■□□□ 1.23
CSNK1E-206ENST00000413574 DEFB131AP59861 70 aa22.73■■□□□ 1.23
CSNK1E-206ENST00000413574 RPP25LQ8N5L8 163 aaKnown RBP22.73■■□□□ 1.23
CSNK1E-206ENST00000413574 CITED4Q96RK1 184 aa22.73■■□□□ 1.23
CSNK1E-206ENST00000413574 IGLC2P0DOY2 106 aa22.72■■□□□ 1.23
CSNK1E-206ENST00000413574 IGFL4Q6B9Z1 124 aa22.72■■□□□ 1.23
CSNK1E-206ENST00000413574 RPRMQ9NS64 109 aa22.72■■□□□ 1.23
CSNK1E-206ENST00000413574 A0A087X0K7 114 aa22.71■■□□□ 1.23
CSNK1E-206ENST00000413574 PSMG4Q5JS54 123 aa22.71■■□□□ 1.23
CSNK1E-206ENST00000413574 C16orf92Q96LL3 132 aa22.71■■□□□ 1.23
CSNK1E-206ENST00000413574 A0A1W2PPV4 95 aa22.71■■□□□ 1.23
CSNK1E-206ENST00000413574 HMGB3O15347 200 aaKnown RBP22.71■■□□□ 1.23
CSNK1E-206ENST00000413574 TMEM41BQ5BJD5 291 aa22.71■■□□□ 1.23
CSNK1E-206ENST00000413574 MBP02144 154 aa22.7■■□□□ 1.22
CSNK1E-206ENST00000413574 MEOX2P50222 304 aa22.7■■□□□ 1.22
CSNK1E-206ENST00000413574 BAP18Q8IXM2 172 aa22.7■■□□□ 1.22
CSNK1E-206ENST00000413574 LINC00052Q96N35 136 aa22.7■■□□□ 1.22
CSNK1E-206ENST00000413574 FAM110AQ9BQ89 295 aa22.7■■□□□ 1.22
CSNK1E-206ENST00000413574 SRD5A3Q9H8P0 318 aa22.7■■□□□ 1.22
CSNK1E-206ENST00000413574 ZNF586Q9NXT0 402 aa22.7■■□□□ 1.22
CSNK1E-206ENST00000413574 PLA2G2EQ9NZK7 142 aa22.7■■□□□ 1.22
CSNK1E-206ENST00000413574 TMEM14CQ9P0S9 112 aa22.7■■□□□ 1.22
CSNK1E-206ENST00000413574 ZNF503Q96F45 646 aa22.69■■□□□ 1.22
CSNK1E-206ENST00000413574 HRH4Q9H3N8 390 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms