RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 H3BRN7 92 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 SSSCA1O60232 199 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 GATA2P23769 480 aaPredicted RBP10.54□□□□□ -0.72
CBX3-203ENST00000409747 RRN3P1Q2M238 152 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 FAM222AQ5U5X8 452 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 LINC00336Q6ZUF6 198 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 C20orf173Q96LM9 149 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 TMEM208Q9BTX3 173 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 RNF24Q9Y225 148 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 HIGD1AQ9Y241 93 aa10.54□□□□□ -0.72
CBX3-203ENST00000409747 LOC102723971A0A1B0GUV8 181 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 OR4E1P0C645 316 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 RPL7P18124 248 aaKnown RBP10.53□□□□□ -0.72
CBX3-203ENST00000409747 OXA1LQ15070 435 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 C4orf46Q504U0 113 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 SMIM8Q96KF7 97 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 IGF2BP2-AS1Q96M15 143 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 SCRT1Q9BWW7 348 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 SLC25A39Q9BZJ4 359 aaPredicted RBP10.53□□□□□ -0.72
CBX3-203ENST00000409747 FNDC10F2Z333 226 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 HYPMO75409 117 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 INSP01308 110 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 DLK1P80370 383 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 BAK1Q16611 211 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 CNPY1Q3B7I2 92 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 TMEM182Q6ZP80 229 aaPredicted RBP10.53□□□□□ -0.72
CBX3-203ENST00000409747 C1orf158Q8N1D5 194 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 SHANK2-AS3Q9BTD1 123 aa10.53□□□□□ -0.72
CBX3-203ENST00000409747 LINC00869P0C866 280 aa10.52□□□□□ -0.73
CBX3-203ENST00000409747 CNN1P51911 297 aaKnown RBP10.52□□□□□ -0.73
CBX3-203ENST00000409747 PLP1P60201 277 aa10.52□□□□□ -0.73
CBX3-203ENST00000409747 B2MP61769 119 aa10.52□□□□□ -0.73
CBX3-203ENST00000409747 FGL1Q08830 312 aa10.52□□□□□ -0.73
CBX3-203ENST00000409747 C17orf77Q96MU5 243 aa10.52□□□□□ -0.73
CBX3-203ENST00000409747 NPVFQ9HCQ7 196 aa10.52□□□□□ -0.73
CBX3-203ENST00000409747 MGAT4CQ9UBM8 478 aa10.52□□□□□ -0.73
CBX3-203ENST00000409747 FLVCR2Q9UPI3 526 aa10.52□□□□□ -0.73
CBX3-203ENST00000409747 YTHDF2Q9Y5A9 579 aaKnown RBP10.52□□□□□ -0.73
CBX3-203ENST00000409747 TAS2R30P59541 319 aa10.51□□□□□ -0.73
CBX3-203ENST00000409747 AMTNQ6UX39 209 aa10.51□□□□□ -0.73
CBX3-203ENST00000409747 GSG1LQ6UXU4 331 aa10.51□□□□□ -0.73
CBX3-203ENST00000409747 ZNF738Q8NE65 137 aa10.51□□□□□ -0.73
CBX3-203ENST00000409747 OR10P1Q8NGE3 313 aa10.51□□□□□ -0.73
CBX3-203ENST00000409747 HERC2O95714 4834 aa10.51□□□□□ -0.73
CBX3-203ENST00000409747 PMS2P5A8MQ11 134 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 K7EPK0 472 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 TSC22D2O75157 780 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 SCGB1D2O95969 90 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 OR5G3P0C626 314 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 ANXA7P20073 488 aaKnown RBP10.5□□□□□ -0.73
CBX3-203ENST00000409747 IAH1Q2TAA2 248 aaPredicted RBP10.5□□□□□ -0.73
CBX3-203ENST00000409747 PXDC1Q5TGL8 231 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 TEPPQ6URK8 271 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 TMEM14EPQ6UXP3 125 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 UBE2DNLQ8IWF7 75 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 OR11H7Q8NGC8 314 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 A0A087X0K7 114 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 TRAV8-2A0A0B4J237 113 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 LINC00854A0A1B0GVQ3 168 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 METTL15P1P0C7V9 234 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 DAD1P61803 113 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 RRAS2P62070 204 aaPredicted RBP10.5□□□□□ -0.73
CBX3-203ENST00000409747 RNF182Q8N6D2 247 aa10.5□□□□□ -0.73
CBX3-203ENST00000409747 HTN3P15516 51 aa10.49□□□□□ -0.73
CBX3-203ENST00000409747 BTCP35070 178 aa10.49□□□□□ -0.73
CBX3-203ENST00000409747 SPINK13Q1W4C9 94 aa10.49□□□□□ -0.73
CBX3-203ENST00000409747 ZNF546Q86UE3 836 aa10.49□□□□□ -0.73
CBX3-203ENST00000409747 LRRC20Q8TCA0 184 aa10.49□□□□□ -0.73
CBX3-203ENST00000409747 MITD1Q8WV92 249 aa10.49□□□□□ -0.73
CBX3-203ENST00000409747 GGACTQ9BVM4 153 aa10.49□□□□□ -0.73
CBX3-203ENST00000409747 ARL6Q9H0F7 186 aa10.49□□□□□ -0.73
CBX3-203ENST00000409747 BOLA2-SMG1P6H3BVE0 249 aa10.48□□□□□ -0.73
CBX3-203ENST00000409747 M0R2Z0 102 aa10.48□□□□□ -0.73
CBX3-203ENST00000409747 IL7P13232 177 aa10.48□□□□□ -0.73
CBX3-203ENST00000409747 IGFL4Q6B9Z1 124 aa10.48□□□□□ -0.73
CBX3-203ENST00000409747 ZBTB8BQ8NAP8 495 aaPredicted RBP10.48□□□□□ -0.73
CBX3-203ENST00000409747 UHRF2Q96PU4 802 aa10.48□□□□□ -0.73
CBX3-203ENST00000409747 PPP1R14DQ9NXH3 145 aa10.48□□□□□ -0.73
CBX3-203ENST00000409747 LYRM9A8MSI8 78 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 CXCL2P19875 107 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 TSPOP30536 169 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 LGALS9BQ3B8N2 356 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 SDHCQ99643 169 aaPredicted RBP10.47□□□□□ -0.73
CBX3-203ENST00000409747 ARV1Q9H2C2 271 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 GSKIPQ9P0R6 139 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 RCL1Q9Y2P8 373 aaKnown RBP10.47□□□□□ -0.73
CBX3-203ENST00000409747 GOSR2O14653 212 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 CRXO43186 299 aaPredicted RBP10.47□□□□□ -0.73
CBX3-203ENST00000409747 CCNKO75909 580 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 CXCL3P19876 107 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 RHOBP62745 196 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 HIST1H1AQ02539 215 aaPredicted RBP10.47□□□□□ -0.73
CBX3-203ENST00000409747 SLC38A11Q08AI6 406 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 ZNF846Q147U1 533 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 RNF212Q495C1 297 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 BAP18Q8IXM2 172 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 TMEM256Q8N2U0 113 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 OR8A1Q8NGG7 326 aa10.47□□□□□ -0.73
CBX3-203ENST00000409747 C20orf85Q9H1P6 137 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 248.2 ms