RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 SLC25A21Q9BQT8 299 aaPredicted RBP8.22□□□□□ -1.09
SOD1-202ENST00000389995 SRRQ9GZT4 340 aa8.22□□□□□ -1.09
SOD1-202ENST00000389995 MAGT1Q9H0U3 335 aa8.22□□□□□ -1.09
SOD1-202ENST00000389995 MDFICQ9P1T7 246 aa8.22□□□□□ -1.09
SOD1-202ENST00000389995 SHPKQ9UHJ6 478 aa8.22□□□□□ -1.09
SOD1-202ENST00000389995 PSG9Q00887 426 aa8.21□□□□□ -1.1
SOD1-202ENST00000389995 BSXQ3C1V8 233 aa8.21□□□□□ -1.1
SOD1-202ENST00000389995 NMSQ5H8A3 153 aa8.21□□□□□ -1.1
SOD1-202ENST00000389995 FAM78BQ5VT40 261 aa8.21□□□□□ -1.1
SOD1-202ENST00000389995 PRSS54Q6PEW0 395 aa8.21□□□□□ -1.1
SOD1-202ENST00000389995 FOXI2Q6ZQN5 318 aa8.21□□□□□ -1.1
SOD1-202ENST00000389995 NOXA1Q86UR1 476 aa8.21□□□□□ -1.1
SOD1-202ENST00000389995 RNF141Q8WVD5 230 aa8.21□□□□□ -1.1
SOD1-202ENST00000389995 Q9H8V8 135 aa8.21□□□□□ -1.1
SOD1-202ENST00000389995 SEPSECSQ9HD40 501 aaKnown RBP8.21□□□□□ -1.1
SOD1-202ENST00000389995 TRAV30A0A087WSZ9 112 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 LINC00854A0A1B0GVQ3 168 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 SMR3BP02814 79 aaPredicted RBP8.2□□□□□ -1.1
SOD1-202ENST00000389995 CLINT1Q14677 625 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 C2orf83Q53S99 150 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 OR51G1Q8NGK1 321 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 OR1S2Q8NGQ3 325 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 RNASEH2CQ8TDP1 164 aaKnown RBP8.2□□□□□ -1.1
SOD1-202ENST00000389995 DTD1Q8TEA8 209 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 C18orf15Q96N68 181 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 TMEM208Q9BTX3 173 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 RBKSQ9H477 322 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 NDUFA13Q9P0J0 144 aa8.2□□□□□ -1.1
SOD1-202ENST00000389995 DUXBA0A1W2PPF3 345 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 NAP1L6A6NFF2 107 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 SFT2D2O95562 160 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 SLC25A4P12235 298 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 AZU1P20160 251 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 YPEL3P61236 119 aaPredicted RBP8.19□□□□□ -1.1
SOD1-202ENST00000389995 PPP1R1AQ13522 171 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 BAK1Q16611 211 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 ETFRF1Q6IPR1 90 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 COQ8AQ8NI60 647 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 NPIPB3Q92617 1050 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 ACY3Q96HD9 319 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 C20orf173Q96LM9 149 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 HSPB7Q9UBY9 170 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 U3KQ87 197 aa8.19□□□□□ -1.1
SOD1-202ENST00000389995 CENPXA8MT69 81 aa8.18□□□□□ -1.1
SOD1-202ENST00000389995 SOCS3O14543 225 aa8.18□□□□□ -1.1
SOD1-202ENST00000389995 HOXB5P09067 269 aa8.18□□□□□ -1.1
SOD1-202ENST00000389995 RD3LP0DJH9 198 aa8.18□□□□□ -1.1
SOD1-202ENST00000389995 HAMPP81172 84 aa8.18□□□□□ -1.1
SOD1-202ENST00000389995 TMEM170AQ8WVE7 144 aa8.18□□□□□ -1.1
SOD1-202ENST00000389995 FRZBQ92765 325 aa8.18□□□□□ -1.1
SOD1-202ENST00000389995 PBDC1Q9BVG4 233 aa8.18□□□□□ -1.1
SOD1-202ENST00000389995 ZNF586Q9NXT0 402 aa8.18□□□□□ -1.1
SOD1-202ENST00000389995 PAIP2BQ9ULR5 123 aaKnown RBP8.18□□□□□ -1.1
SOD1-202ENST00000389995 A0A0J9YX75 114 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 PLAC8L1A1L4L8 177 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 LYRM9A8MSI8 78 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 PRSS47A8MTI9 375 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 M0R2Z0 102 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 IAPPP10997 89 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 PSG1P11464 419 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 BTF3P20290 206 aaKnown RBP8.17□□□□□ -1.1
SOD1-202ENST00000389995 ID1P41134 155 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 PSMB3P49720 205 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 UBE2MP61081 183 aaKnown RBP8.17□□□□□ -1.1
SOD1-202ENST00000389995 EBLN2Q6P2I7 272 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 LRTM2Q8N967 370 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 Q9H3A6 140 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 HMCN2Q8NDA2 5059 aa8.17□□□□□ -1.1
SOD1-202ENST00000389995 MED6O75586 246 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 NDUFB6O95139 128 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 TOMM40O96008 361 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 ATP5G1P05496 136 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 IL7P13232 177 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 ATP5G3P48201 142 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 PAX9P55771 341 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 KRTAP10-1P60331 282 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 RAB11AP62491 216 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 SPINK13Q1W4C9 94 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 AMTNQ6UX39 209 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 RNF125Q96EQ8 232 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 SLC35E1Q96K37 410 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 IGF2BP2-AS1Q96M15 143 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 SDHCQ99643 169 aaPredicted RBP8.16□□□□□ -1.1
SOD1-202ENST00000389995 FLVCR2Q9UPI3 526 aa8.16□□□□□ -1.1
SOD1-202ENST00000389995 TRAV12-2A0A075B6T6 113 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 A0A0J9YY99 117 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 C9orf170A2RU37 121 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 CRXO43186 299 aaPredicted RBP8.15□□□□□ -1.1
SOD1-202ENST00000389995 PITX3O75364 302 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 SLC25A6P12236 298 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 SMCPP49901 116 aaPredicted RBP8.15□□□□□ -1.1
SOD1-202ENST00000389995 ATP5IP56385 69 aaPredicted RBP8.15□□□□□ -1.1
SOD1-202ENST00000389995 LINC00315P59091 139 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 ESRGQ1W209 222 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 TTC32Q5I0X7 151 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 GGNBP1Q5YKI7 109 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 BAP18Q8IXM2 172 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 DOK5Q9P104 306 aa8.15□□□□□ -1.1
SOD1-202ENST00000389995 TRAV26-1A0A087WT03 109 aa8.14□□□□□ -1.11
SOD1-202ENST00000389995 CBY3A6NI87 242 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms