RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 A0A0A6YYD4 124 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 PGPEP1LA6NFU8 196 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 PAX2Q02962 417 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 FOXE3Q13461 319 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 TMEM141Q96I45 108 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 CCDC88CQ9P219 2028 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 CACNA1EQ15878 2313 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 MTCL1Q9Y4B5 1905 aaKnown RBP5.8□□□□□ -1.48
CCDC171-201ENST00000380701 MDKP21741 143 aaPredicted RBP5.8□□□□□ -1.48
CCDC171-201ENST00000380701 RPRMLQ8N4K4 120 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 DERL1Q9BUN8 251 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 SCRT1Q9BWW7 348 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 TMEM14CQ9P0S9 112 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 NINQ8N4C6 2090 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 A8MXK9 166 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 MRPL53Q96EL3 112 aaKnown RBP5.8□□□□□ -1.48
CCDC171-201ENST00000380701 LENEPQ9Y5L5 61 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 SELLP14151 372 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 C10orf55Q5SWW7 151 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 LINC00527Q9UJ94 153 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 TET1Q8NFU7 2136 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 ZNF561-AS1K7EIQ3 104 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 M0R2P5 195 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 ATP6V0E1O15342 81 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 IGKV1-5P01602 117 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 LOXP28300 417 aaPredicted RBP5.8□□□□□ -1.48
CCDC171-201ENST00000380701 ABCA7Q8IZY2 2146 aa5.8□□□□□ -1.48
CCDC171-201ENST00000380701 ACACAQ13085 2346 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 RPL15P61313 204 aaKnown RBP5.79□□□□□ -1.48
CCDC171-201ENST00000380701 HSD52Q0P140 79 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 LYPD2Q6UXB3 125 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 NHP2Q9NX24 153 aaKnown RBP5.79□□□□□ -1.48
CCDC171-201ENST00000380701 TRAV12-3A0A0B4J271 114 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 LEPROTO15243 131 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 NDUFS6O75380 124 aaKnown RBP5.79□□□□□ -1.48
CCDC171-201ENST00000380701 NDUFA3O95167 84 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 CNOT1A5YKK6 2376 aaKnown RBP5.79□□□□□ -1.48
CCDC171-201ENST00000380701 SRSF4Q08170 494 aaKnown RBP5.79□□□□□ -1.48
CCDC171-201ENST00000380701 C21orf62-AS1Q17RA5 79 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 CHAC1Q9BUX1 264 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 LIME1Q9H400 295 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 ZFC3H1O60293 1989 aaKnown RBP5.79□□□□□ -1.48
CCDC171-201ENST00000380701 IGHV1OR15-1A0A075B7D0 117 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 SH2D1AO60880 128 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 POU2AF1Q16633 256 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 OCC1Q8TAD7 63 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 KLF12Q9Y4X4 402 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 GVINP1Q7Z2Y8 2422 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 PFN1P07737 140 aaKnown RBP5.79□□□□□ -1.48
CCDC171-201ENST00000380701 LGALS1P09382 135 aaKnown RBP5.79□□□□□ -1.48
CCDC171-201ENST00000380701 ZNF493Q6ZR52 646 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 MGST2Q99735 147 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 SPANXDQ9BXN6 97 aa5.79□□□□□ -1.48
CCDC171-201ENST00000380701 IGKV2-40A0A087WW87 121 aaPredicted RBP5.78□□□□□ -1.48
CCDC171-201ENST00000380701 F5H768 121 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 IGKV2D-40P01614 121 aaPredicted RBP5.78□□□□□ -1.48
CCDC171-201ENST00000380701 QRFPP83859 136 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 LRRC75A-AS1Q8N1F1 130 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 TMEM14BQ9NUH8 114 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 ERG28Q9UKR5 140 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 THADAQ6YHU6 1953 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 TDRD6O60522 2096 aaKnown RBP5.78□□□□□ -1.48
CCDC171-201ENST00000380701 PAX4O43316 350 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 CA1P00915 261 aaPredicted RBP5.78□□□□□ -1.48
CCDC171-201ENST00000380701 IGHV2-5P01817 119 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 NDUFA4L2Q9NRX3 87 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 FAM215AQ9Y5M1 114 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 SBF1O95248 1867 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 A0A1B0GWB2 263 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 ZNF329Q86UD4 541 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 SPAG8Q99932 426 aaPredicted RBP5.78□□□□□ -1.48
CCDC171-201ENST00000380701 RNASE7Q9H1E1 156 aaKnown RBP5.78□□□□□ -1.48
CCDC171-201ENST00000380701 C5orf63A6NC05 138 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 CDKN1BP46527 198 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 FOXI2Q6ZQN5 318 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 Q86TA4 180 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 RP1P56715 2156 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 CEP250Q9BV73 2442 aa5.78□□□□□ -1.48
CCDC171-201ENST00000380701 PLA2G5P39877 138 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 TCTEX1D4Q5JR98 221 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 IGKV1D-8A0A087WSZ0 117 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 TRAV25A0A0B4J276 109 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 A0A1W2PPI3 338 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 TCF15Q12870 199 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 PRR30Q53SZ7 412 aaPredicted RBP5.77□□□□□ -1.49
CCDC171-201ENST00000380701 LYZL1Q6UWQ5 148 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 ARL6IP6Q8N6S5 226 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 DLX4Q92988 240 aaPredicted RBP5.77□□□□□ -1.49
CCDC171-201ENST00000380701 C15orf62A8K5M9 175 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 INSL3P51460 131 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 SRSF6Q13247 344 aaKnown RBP5.77□□□□□ -1.49
CCDC171-201ENST00000380701 FBXL19-AS1Q494R0 122 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 COL4A6Q14031 1691 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 IGHV7-4-1A0A0J9YVY3 117 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 LINC00473A8K010 186 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 DEFB130BP0DP73 79 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 DEFB130AP0DP74 79 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 TMEM243Q9BU79 118 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 H3BMM0 161 aa5.77□□□□□ -1.49
CCDC171-201ENST00000380701 CD300CQ08708 224 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms