RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TWIST1Q15672 202 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 OCC1Q8TAD7 63 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 C8orf46Q8TAG6 207 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 RNF223E7ERA6 249 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 CA1P00915 261 aaPredicted RBP11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 RUSC1-AS1Q66K80 236 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 TPSG1Q9NRR2 321 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 NDUFA4L2Q9NRX3 87 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 NUP210LQ5VU65 1888 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 SLC25A16P16260 332 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 ZNF562Q6V9R5 426 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 EPDR1Q9UM22 224 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 RNASE7Q9H1E1 156 aaKnown RBP11.44□□□□□ -0.58
SHROOM1-203ENST00000378679 PLXNB1O43157 2135 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 PMS2P5A8MQ11 134 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 SCRT1Q9BWW7 348 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 LOC389332A0A1B0GUA5 103 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 A8MWP6 167 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 GPX1P07203 203 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 MGPP08493 103 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 TRGV9Q99603 122 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 TNRC6AQ8NDV7 1962 aaKnown RBP11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 IGHV2-70DA0A0C4DH43 119 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 DLEU1O43261 78 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 WT1-ASQ06250 92 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 C10orf91Q5T1B1 145 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 LCN12Q6JVE5 192 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 HAPLN4Q86UW8 402 aa11.43□□□□□ -0.58
SHROOM1-203ENST00000378679 FBXL19-AS1Q494R0 122 aa11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 FAM90A2PQ658T7 463 aa11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 ITLN2Q8WWU7 325 aaPredicted RBP11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 NEU1Q99519 415 aa11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 JMJD1CQ15652 2540 aa11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 TRBV24-1A0A075B6N3 115 aa11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 IL36BQ9NZH7 164 aa11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 ZNF329Q86UD4 541 aa11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 ZNF418Q8TF45 676 aaPredicted RBP11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 OTORQ9NRC9 128 aa11.42□□□□□ -0.58
SHROOM1-203ENST00000378679 C11orf44Q8N8P7 122 aa11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 C2orf88Q9BSF0 95 aa11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 ABCA12Q86UK0 2595 aa11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 SSBP4Q9BWG4 385 aaPredicted RBP11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 TMEM191AQ9H0A3 160 aa11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 NUDT3O95989 172 aa11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 PRSS1P07477 247 aa11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 SNRPD3P62318 126 aaKnown RBP11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 PAX8Q06710 450 aa11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 OR4X2Q8NGF9 303 aa11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 NAA38Q9BRA0 125 aaKnown RBP11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 MIEN1Q9BRT3 115 aa11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 SLC25A39Q9BZJ4 359 aaPredicted RBP11.41□□□□□ -0.58
SHROOM1-203ENST00000378679 IFITM10A6NMD0 228 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 NRN1Q9NPD7 142 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 LAMTOR2Q9Y2Q5 125 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 WDFY3Q8IZQ1 3526 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 NBEAQ8NFP9 2946 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 MUC21A0A0G2JKD1 596 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 MUC21A0A140T8X8 626 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 CKS2P33552 79 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 RPL15P61313 204 aaKnown RBP11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 POU2AF1Q16633 256 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 MUC21Q5SSG8 566 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 C19orf35Q6ZS72 473 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 LINC01356Q8N9X3 169 aa11.4□□□□□ -0.58
SHROOM1-203ENST00000378679 A0A1B0GW64 132 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 PLA2G5P39877 138 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 NMUP48645 174 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 Q6ZPA2 131 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 Q6ZVH6 145 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 IGHV1-69DA0A0B4J2H0 117 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 FNDC10F2Z333 226 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 IGHV1-69P01742 117 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 EXOC3-AS1Q8N2X6 119 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 ZNF462Q96JM2 2506 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 PKD1L2Q7Z442 2459 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 K7ERU9 68 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 FMC1Q96HJ9 113 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 PHLDA3Q9Y5J5 127 aa11.39□□□□□ -0.59
SHROOM1-203ENST00000378679 A0A1W2PRX2 142 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 RPS20P60866 119 aaKnown RBP11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 LDLRAD2Q5SZI1 272 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 DYSFO75923 2080 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 DSCAMO60469 2012 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 EML5Q05BV3 1969 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 Q5PR19 223 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 IGFBPL1Q8WX77 278 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 KCNS1Q96KK3 526 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 ALKBH7Q9BT30 221 aaPredicted RBP11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 MCRIP2Q9BUT9 160 aaKnown RBP11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 IGHV3OR16-12A0A075B7B8 117 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 PMCHL1Q16048 86 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 YTHDF2Q9Y5A9 579 aaKnown RBP11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 G3V318 75 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 ASPHD1Q5U4P2 390 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 ZNF841Q6ZN19 808 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 LINC01551Q86U37 167 aa11.38□□□□□ -0.59
SHROOM1-203ENST00000378679 GAGE10A6NGK3 116 aa11.37□□□□□ -0.59
SHROOM1-203ENST00000378679 PSG8Q9UQ74 426 aa11.37□□□□□ -0.59
SHROOM1-203ENST00000378679 HIGD1CA8MV81 97 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms