RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CDC42EP3Q9UKI2 254 aa19.52■□□□□ 0.71
CTSA-203ENST00000372459 USF2Q15853 346 aaPredicted RBP19.51■□□□□ 0.71
CTSA-203ENST00000372459 Q5PR19 223 aa19.51■□□□□ 0.71
CTSA-203ENST00000372459 MAPK1IP1LQ8NDC0 245 aa19.51■□□□□ 0.71
CTSA-203ENST00000372459 OR10G8Q8NGN5 311 aa19.51■□□□□ 0.71
CTSA-203ENST00000372459 CSMD2Q7Z408 3487 aa19.51■□□□□ 0.71
CTSA-203ENST00000372459 CELSR2Q9HCU4 2923 aa19.5■□□□□ 0.71
CTSA-203ENST00000372459 TRAV41A0A0B4J266 112 aa19.5■□□□□ 0.71
CTSA-203ENST00000372459 SLC25A5P05141 298 aaKnown RBP19.5■□□□□ 0.71
CTSA-203ENST00000372459 PKIAP61925 76 aa19.5■□□□□ 0.71
CTSA-203ENST00000372459 IGF2BP2-AS1Q96M15 143 aa19.5■□□□□ 0.71
CTSA-203ENST00000372459 EPDR1Q9UM22 224 aa19.5■□□□□ 0.71
CTSA-203ENST00000372459 RNF24Q9Y225 148 aa19.5■□□□□ 0.71
CTSA-203ENST00000372459 OR4F17Q8NGA8 305 aa19.49■□□□□ 0.71
CTSA-203ENST00000372459 Q9H3A6 140 aa19.49■□□□□ 0.71
CTSA-203ENST00000372459 ZNF586Q9NXT0 402 aa19.49■□□□□ 0.71
CTSA-203ENST00000372459 PLA2G2AP14555 144 aa19.48■□□□□ 0.71
CTSA-203ENST00000372459 C19orf54Q5BKX5 351 aa19.48■□□□□ 0.71
CTSA-203ENST00000372459 CHRDL1Q9BU40 450 aa19.48■□□□□ 0.71
CTSA-203ENST00000372459 TRAV9-1A0A075B6T8 112 aa19.48■□□□□ 0.71
CTSA-203ENST00000372459 ZNF320A2RRD8 509 aa19.48■□□□□ 0.71
CTSA-203ENST00000372459 C5orf17Q8NAS9 161 aa19.48■□□□□ 0.71
CTSA-203ENST00000372459 EEF1AKMT3Q96AZ1 226 aa19.48■□□□□ 0.71
CTSA-203ENST00000372459 H3BTX0 84 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 IGF1P05019 195 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 IGHV4-31P0DP07 118 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 GPR183P32249 361 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 ADMP35318 185 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 GNG5P63218 68 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 DEFA6Q01524 100 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 LINC00479Q96M42 142 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 MS4A10Q96PG2 267 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 OTORQ9NRC9 128 aa19.47■□□□□ 0.71
CTSA-203ENST00000372459 TSTD3H0UI37 97 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 J3QKU1 62 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 OR5I1Q13606 314 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 TRAPPC1Q9Y5R8 145 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 ZFHX3Q15911 3703 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 TRBV7-1A0A0A6YYK4 115 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 GCGP01275 180 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 IGLV2-8P01709 118 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 IGHG2P01859 326 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 CLEC3BP05452 202 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 GZMBP10144 247 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 ERVFC1-1P60608 527 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 TMEM18Q96B42 140 aa19.46■□□□□ 0.71
CTSA-203ENST00000372459 USP9YO00507 2555 aaPredicted RBP19.45■□□□□ 0.7
CTSA-203ENST00000372459 TMEM190Q8WZ59 177 aa19.45■□□□□ 0.7
CTSA-203ENST00000372459 MBD6Q96DN6 1003 aa19.45■□□□□ 0.7
CTSA-203ENST00000372459 ATG101Q9BSB4 218 aa19.45■□□□□ 0.7
CTSA-203ENST00000372459 ZMAT5Q9UDW3 170 aaKnown RBP19.45■□□□□ 0.7
CTSA-203ENST00000372459 LINC00527Q9UJ94 153 aa19.45■□□□□ 0.7
CTSA-203ENST00000372459 IGLC2P0DOY2 106 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 S100A7P31151 101 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 TMEM183BQ1AE95 376 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 BCL6BQ8N143 479 aaPredicted RBP19.44■□□□□ 0.7
CTSA-203ENST00000372459 PTPN13Q12923 2485 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 TRBV19A0A075B6N1 114 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 UBE2G1P62253 170 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 ATP5G2Q06055 141 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 PRSS57Q6UWY2 283 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 CCDC140Q96MF4 163 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 RABAC1Q9UI14 185 aa19.44■□□□□ 0.7
CTSA-203ENST00000372459 TRAV34A0A0B4J273 112 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 FAM223BA6NKX1 122 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 BMPR1BO00238 502 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 MRPS12O15235 138 aaKnown RBP19.43■□□□□ 0.7
CTSA-203ENST00000372459 MGST1P10620 155 aaKnown RBP19.43■□□□□ 0.7
CTSA-203ENST00000372459 DEFB112Q30KQ8 113 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 BAGE2Q86Y30 109 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 FAM223AQ8IWN6 122 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 Q96MF0 132 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 RPH3ALQ9UNE2 315 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 ISLRO14498 428 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 CLEC19AQ6UXS0 136 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 GBGT1Q8N5D6 347 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 OSTCQ9NRP0 149 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 CELSR1Q9NYQ6 3014 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 IL36BQ9NZH7 164 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 KLF12Q9Y4X4 402 aa19.43■□□□□ 0.7
CTSA-203ENST00000372459 POLQO75417 2590 aa19.42■□□□□ 0.7
CTSA-203ENST00000372459 TCRAP04437 139 aa19.42■□□□□ 0.7
CTSA-203ENST00000372459 LYPD1Q8N2G4 141 aa19.42■□□□□ 0.7
CTSA-203ENST00000372459 ATP6V0BQ99437 205 aa19.42■□□□□ 0.7
CTSA-203ENST00000372459 DDTP30046 118 aa19.41■□□□□ 0.7
CTSA-203ENST00000372459 CMTM2Q8TAZ6 248 aa19.41■□□□□ 0.7
CTSA-203ENST00000372459 GNB4Q9HAV0 340 aa19.41■□□□□ 0.7
CTSA-203ENST00000372459 KMT2BQ9UMN6 2715 aaPredicted RBP19.41■□□□□ 0.7
CTSA-203ENST00000372459 SLC17A3O00476 420 aa19.41■□□□□ 0.7
CTSA-203ENST00000372459 BLCAPP62952 87 aa19.41■□□□□ 0.7
CTSA-203ENST00000372459 FMC1Q96HJ9 113 aa19.41■□□□□ 0.7
CTSA-203ENST00000372459 V9GYV3 84 aa19.41■□□□□ 0.7
CTSA-203ENST00000372459 MAP1AP78559 2803 aaPredicted RBP19.4■□□□□ 0.7
CTSA-203ENST00000372459 CR1P17927 2039 aa19.4■□□□□ 0.7
CTSA-203ENST00000372459 H3BUA1 57 aa19.4■□□□□ 0.7
CTSA-203ENST00000372459 TRGV3P03979 118 aa19.4■□□□□ 0.7
CTSA-203ENST00000372459 TOMM20LQ6UXN7 152 aa19.4■□□□□ 0.7
CTSA-203ENST00000372459 EXOC3-AS1Q8N2X6 119 aa19.4■□□□□ 0.7
CTSA-203ENST00000372459 SMIM12Q96EX1 92 aa19.4■□□□□ 0.7
CTSA-203ENST00000372459 ZNF414Q96IQ9 312 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 1240 ms