RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TRAV1-1A0A0B4J248 108 aa10.97□□□□□ -0.65
RAPGEF1-201ENST00000372189 ZNF474Q6S9Z5 364 aaPredicted RBP10.97□□□□□ -0.65
RAPGEF1-201ENST00000372189 C16orf54Q6UWD8 224 aa10.97□□□□□ -0.65
RAPGEF1-201ENST00000372189 FAM90A9PA6NNJ1 464 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 BUB3O43684 328 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 CEACAM4O75871 244 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 SLC25A16P16260 332 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 H3BRM9 83 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 CD33P20138 364 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 UBE2E1P51965 193 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 GFI1BQ5VTD9 330 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 CHAC1Q9BUX1 264 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 HBDP02042 147 aa10.96□□□□□ -0.65
RAPGEF1-201ENST00000372189 SRRM5B3KS81 715 aa10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 CDK2AP2O75956 126 aa10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 SELLP14151 372 aa10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 SRSF7Q16629 238 aaKnown RBP eCLIP10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 TIMM23O14925 209 aa10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 CD55P08174 381 aa10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 TCF15Q12870 199 aa10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 NSUN5P1Q3KNT7 163 aa10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 BCL6BQ8N143 479 aaPredicted RBP10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 SELENOKQ9Y6D0 94 aa10.96□□□□□ -0.66
RAPGEF1-201ENST00000372189 MUC21A0A0G2JKD1 596 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 MUC21A0A140T8X8 626 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 PLNP26678 52 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 MUC21Q5SSG8 566 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 C8orf46Q8TAG6 207 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 RNF166Q96A37 237 aaPredicted RBP10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 C9JAW5 83 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 MYOD1P15172 320 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 DTX2Q86UW9 622 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 LHFPL1Q86WI0 220 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 ARHGEF17Q96PE2 2063 aaPredicted RBP10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 TNFRSF18Q9Y5U5 241 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 PLXNA4Q9HCM2 1894 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 MPV17L2Q567V2 206 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 VSIRQ9H7M9 311 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 FOXL1Q12952 345 aa10.95□□□□□ -0.66
RAPGEF1-201ENST00000372189 WDR83OSQ9Y284 106 aa10.94□□□□□ -0.66
RAPGEF1-201ENST00000372189 IGHV2-26A0A0B4J1V2 119 aa10.94□□□□□ -0.66
RAPGEF1-201ENST00000372189 TMEM200BQ69YZ2 307 aa10.94□□□□□ -0.66
RAPGEF1-201ENST00000372189 C9JCJ5 164 aa10.94□□□□□ -0.66
RAPGEF1-201ENST00000372189 K7EP34 96 aa10.94□□□□□ -0.66
RAPGEF1-201ENST00000372189 EFNB3Q15768 340 aa10.94□□□□□ -0.66
RAPGEF1-201ENST00000372189 TSKUQ8WUA8 353 aa10.94□□□□□ -0.66
RAPGEF1-201ENST00000372189 IGKV1D-8A0A087WSZ0 117 aa10.94□□□□□ -0.66
RAPGEF1-201ENST00000372189 PAX1P15863 534 aa10.93□□□□□ -0.66
RAPGEF1-201ENST00000372189 CXCL5P42830 114 aa10.93□□□□□ -0.66
RAPGEF1-201ENST00000372189 LINC01356Q8N9X3 169 aa10.93□□□□□ -0.66
RAPGEF1-201ENST00000372189 DTX1Q86Y01 620 aa10.93□□□□□ -0.66
RAPGEF1-201ENST00000372189 RALGAPA1Q6GYQ0 2036 aa10.93□□□□□ -0.66
RAPGEF1-201ENST00000372189 FAM231BA6NCW3 169 aa10.93□□□□□ -0.66
RAPGEF1-201ENST00000372189 ACTL10Q5JWF8 245 aa10.93□□□□□ -0.66
RAPGEF1-201ENST00000372189 CACNA1IQ9P0X4 2223 aa10.93□□□□□ -0.66
RAPGEF1-201ENST00000372189 C15orf53Q8NAA6 179 aa10.93□□□□□ -0.66
RAPGEF1-201ENST00000372189 FABP5P3A8MUU1 101 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 ATOX1O00244 68 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 SOCS3O14543 225 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 ARTNQ5T4W7 220 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 COQ2Q96H96 371 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 PPBPP02775 128 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 IGHV1-8P0DP01 117 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 SUPT4H1P63272 117 aaKnown RBP10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 PVRIGQ6DKI7 326 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 NPIPB5A8MRT5 1133 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 MALP21145 153 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 WFDC9Q8NEX5 89 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 AGMATQ9BSE5 352 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 UBL5Q9BZL1 73 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 IGHG4P01861 327 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 SRSF1Q07955 248 aaKnown RBP eCLIP10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 MINOS1Q5TGZ0 78 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 MINOS1-NBL1R4GNA1 71 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 IGHV3OR16-8A0A075B7F1 116 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 RHOGP84095 191 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 KLRD1Q13241 179 aa10.92□□□□□ -0.66
RAPGEF1-201ENST00000372189 KIAA1671Q9BY89 1806 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 A8MWP6 167 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 M0R1W7 72 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 TRAV8-3A0A0A6YYJ7 113 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 E7EQL1 145 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 PRCDQ00LT1 54 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 RNF182Q8N6D2 247 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 IGKV3OR2-268A0A0C4DH90 116 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 IGKCP01834 107 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 COL8A2P25067 703 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 TMEM190Q8WZ59 177 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 PNRC2Q9NPJ4 139 aaKnown RBP10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 PYYP10082 97 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 CD177Q8N6Q3 437 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 PRADC1Q9BSG0 188 aa10.91□□□□□ -0.66
RAPGEF1-201ENST00000372189 C9orf118A6NHY6 69 aa10.9□□□□□ -0.66
RAPGEF1-201ENST00000372189 TAL2Q16559 108 aa10.9□□□□□ -0.66
RAPGEF1-201ENST00000372189 SNHG12Q9BXW3 62 aa10.9□□□□□ -0.66
RAPGEF1-201ENST00000372189 RPUSD1Q9UJJ7 312 aaKnown RBP10.9□□□□□ -0.66
RAPGEF1-201ENST00000372189 PSG8Q9UQ74 426 aa10.9□□□□□ -0.66
RAPGEF1-201ENST00000372189 NLRC5Q86WI3 1866 aa10.9□□□□□ -0.66
RAPGEF1-201ENST00000372189 IGKV1-12A0A0C4DH73 117 aa10.9□□□□□ -0.66
RAPGEF1-201ENST00000372189 IGKV1D-12P01611 117 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms