RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 FAM231DQ6ZW35 169 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 OR5AN1Q8NGI8 311 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 CMTM2Q8TAZ6 248 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 HINT2Q9BX68 163 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 NDUFA4L2Q9NRX3 87 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 SERTAD4Q9NUC0 356 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 MOB4Q9Y3A3 225 aa8.18□□□□□ -1.1
COL5A1-202ENST00000371820 TRAV3A0A0B4J244 114 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 SCO2A0A1W2PP80 73 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 FCN1O00602 326 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 BLCAPP62952 87 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 CX3CL1P78423 397 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 DMRTA1Q5VZB9 504 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF600Q6ZNG1 722 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 BAGE3Q86Y29 109 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 BAGE2Q86Y30 109 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 NDUFA11Q86Y39 141 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 MMD2Q8IY49 270 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 TEX45Q8NA69 505 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 OR4F17Q8NGA8 305 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 OR5AU1Q8NGC0 362 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 OR1L6Q8NGR2 347 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 FAM110DQ8TAY7 271 aaPredicted RBP8.17□□□□□ -1.1
COL5A1-202ENST00000371820 RNF5Q99942 180 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 ELOVL1Q9BW60 279 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 WNT10AQ9GZT5 417 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 MRPL18Q9H0U6 180 aaKnown RBP8.17□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF331Q9NQX6 463 aaPredicted RBP8.17□□□□□ -1.1
COL5A1-202ENST00000371820 NAGKQ9UJ70 344 aa8.17□□□□□ -1.1
COL5A1-202ENST00000371820 M0R143 59 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 SLC31A2O15432 143 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 RNASE2P10153 161 aaKnown RBP8.16□□□□□ -1.1
COL5A1-202ENST00000371820 TMEM11P17152 192 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF137PP52743 207 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 RPS16P62249 146 aaKnown RBP8.16□□□□□ -1.1
COL5A1-202ENST00000371820 HES1Q14469 280 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 GCSAMLQ5JQS6 135 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 C19orf35Q6ZS72 473 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 VKORC1L1Q8N0U8 176 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF664Q8N3J9 261 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 C11orf44Q8N8P7 122 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 OR4X2Q8NGF9 303 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 SRSF8Q9BRL6 282 aaKnown RBP8.16□□□□□ -1.1
COL5A1-202ENST00000371820 SEPSECSQ9HD40 501 aaKnown RBP8.16□□□□□ -1.1
COL5A1-202ENST00000371820 WASHC3Q9Y3C0 194 aa8.16□□□□□ -1.1
COL5A1-202ENST00000371820 YTHDF2Q9Y5A9 579 aaKnown RBP8.16□□□□□ -1.1
COL5A1-202ENST00000371820 A0A1W2PPI3 338 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 TCRBV4S1A1TA0A5B7 111 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 IZUMO1RA6ND01 250 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF705FA8MVS1 300 aaPredicted RBP8.15□□□□□ -1.1
COL5A1-202ENST00000371820 COX7A2P2O60397 106 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 OR7C2O60412 319 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 IGHV3-7P01780 117 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF705DP0CH99 300 aaPredicted RBP8.15□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF705BP0CI00 300 aaPredicted RBP8.15□□□□□ -1.1
COL5A1-202ENST00000371820 CD24P25063 80 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 SUMO1P63165 101 aaKnown RBP8.15□□□□□ -1.1
COL5A1-202ENST00000371820 C10orf113Q5VZT2 155 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 FAM53AQ6NSI3 398 aaPredicted RBP8.15□□□□□ -1.1
COL5A1-202ENST00000371820 TOMM20LQ6UXN7 152 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 THAP8Q8NA92 274 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 WIPF2Q8TF74 440 aaPredicted RBP8.15□□□□□ -1.1
COL5A1-202ENST00000371820 LEAP2Q969E1 77 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 HARBI1Q96MB7 349 aa8.15□□□□□ -1.1
COL5A1-202ENST00000371820 ZNF430Q9H8G1 570 aaPredicted RBP8.15□□□□□ -1.1
COL5A1-202ENST00000371820 IGHV1-3A0A0C4DH29 117 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 SMIM27A0A1W2PRY6 76 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 H0YJW9 148 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 AMY1AP04745 511 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 HIST1H1EP10412 219 aaKnown RBP8.14□□□□□ -1.11
COL5A1-202ENST00000371820 CD28P10747 220 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 CRYBB3P26998 211 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 ADMP35318 185 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 LINC00205P59089 165 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 USF2Q15853 346 aaPredicted RBP8.14□□□□□ -1.11
COL5A1-202ENST00000371820 TMEM183BQ1AE95 376 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 BEAN1Q3B7T3 259 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 NSUN5P1Q3KNT7 163 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 IBA57Q5T440 356 aaKnown RBP8.14□□□□□ -1.11
COL5A1-202ENST00000371820 KPRPQ5T749 579 aaPredicted RBP8.14□□□□□ -1.11
COL5A1-202ENST00000371820 MIR17HGQ75NE6 70 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 ATP5L2Q7Z4Y8 100 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 MOB3BQ86TA1 216 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 GRAMD2BQ96HH9 432 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 CITED2Q99967 270 aaPredicted RBP8.14□□□□□ -1.11
COL5A1-202ENST00000371820 C20orf144Q9BQM9 153 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 PAXXQ9BUH6 204 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 SAMD10Q9BYL1 202 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 ZNF586Q9NXT0 402 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 MRPL27Q9P0M9 148 aaKnown RBP8.14□□□□□ -1.11
COL5A1-202ENST00000371820 V9GYV3 84 aa8.14□□□□□ -1.11
COL5A1-202ENST00000371820 SNURFLB1AK76 121 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 G3V4G9 280 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 ACTL6BO94805 426 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 SAA1P0DJI8 122 aaPredicted RBP8.13□□□□□ -1.11
COL5A1-202ENST00000371820 S100A7P31151 101 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 TMEM95Q3KNT9 176 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 CENPWQ5EE01 88 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 UTF1Q5T230 341 aa8.13□□□□□ -1.11
COL5A1-202ENST00000371820 SAMD5Q5TGI4 173 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms