RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 KLF5Q13887 457 aaPredicted RBP17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 GDF5OSQ5U4N7 250 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 OR4B1Q8NGF8 309 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 RCHY1Q96PM5 261 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 COL6A6A6NMZ7 2263 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 NPIPB6E9PJ23 425 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 ZFP36P26651 326 aaKnown RBP17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 HBBP68871 147 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 KLF17Q5JT82 389 aaPredicted RBP17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 GOLT1AQ6ZVE7 132 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 C18orf32Q8TCD1 76 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 ITLN2Q8WWU7 325 aaPredicted RBP17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 ABCA1O95477 2261 aa17.53■□□□□ 0.4
NKX2-1-201ENST00000354822 SCGB2A1O75556 95 aa17.52■□□□□ 0.4
NKX2-1-201ENST00000354822 CD33P20138 364 aa17.52■□□□□ 0.4
NKX2-1-201ENST00000354822 TMEM75Q8N9X5 138 aa17.52■□□□□ 0.4
NKX2-1-201ENST00000354822 SIRPDQ9H106 197 aa17.52■□□□□ 0.4
NKX2-1-201ENST00000354822 NRN1Q9NPD7 142 aa17.52■□□□□ 0.4
NKX2-1-201ENST00000354822 ZFP30Q9Y2G7 519 aa17.52■□□□□ 0.4
NKX2-1-201ENST00000354822 IGLV2-11P01706 119 aa17.52■□□□□ 0.39
NKX2-1-201ENST00000354822 TMEM11P17152 192 aa17.52■□□□□ 0.39
NKX2-1-201ENST00000354822 FCGR2BP31994 310 aaPredicted RBP17.52■□□□□ 0.39
NKX2-1-201ENST00000354822 CDKN1AP38936 164 aa17.52■□□□□ 0.39
NKX2-1-201ENST00000354822 CAMPP49913 170 aa17.52■□□□□ 0.39
NKX2-1-201ENST00000354822 DYNAPQ8N1N2 210 aa17.52■□□□□ 0.39
NKX2-1-201ENST00000354822 IGFBPL1Q8WX77 278 aa17.52■□□□□ 0.39
NKX2-1-201ENST00000354822 C1RLQ9NZP8 487 aa17.52■□□□□ 0.39
NKX2-1-201ENST00000354822 VWC2LB2RUY7 222 aa17.51■□□□□ 0.39
NKX2-1-201ENST00000354822 HLA-DRB1P01911 266 aa17.51■□□□□ 0.39
NKX2-1-201ENST00000354822 COL8A1P27658 744 aa17.51■□□□□ 0.39
NKX2-1-201ENST00000354822 EFNA4P52798 201 aa17.51■□□□□ 0.39
NKX2-1-201ENST00000354822 PDE6HQ13956 83 aa17.51■□□□□ 0.39
NKX2-1-201ENST00000354822 RBPMS2Q6ZRY4 209 aaKnown RBP17.51■□□□□ 0.39
NKX2-1-201ENST00000354822 TCF24Q7RTU0 167 aa17.51■□□□□ 0.39
NKX2-1-201ENST00000354822 PRNTQ86SH4 94 aa17.51■□□□□ 0.39
NKX2-1-201ENST00000354822 MRPS12O15235 138 aaKnown RBP17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 GNLYP22749 145 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 UQCRFS1P47985 274 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 SIGLEC15Q6ZMC9 328 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 C2orf88Q9BSF0 95 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 C21orf62Q9NYP8 219 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 A0A1W2PPR1 153 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 FAM106CPP0CH98 169 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 FBLN7Q53RD9 439 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 VN1R17PQ8TDU5 208 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 GTSF1Q8WW33 167 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 ZNF414Q96IQ9 312 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 ALKBH7Q9BT30 221 aaPredicted RBP17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 FBXL7Q9UJT9 491 aa17.5■□□□□ 0.39
NKX2-1-201ENST00000354822 TRAV8-1A0A0A6YYK1 113 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 PMCHP20382 165 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 Q56UQ5 140 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 C20orf144Q9BQM9 153 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 NBASA2RRP1 2371 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 TMEM8BA6NDV4 472 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 UBE2E1P51965 193 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 KRTDAPP60985 99 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 FAM162BQ5T6X4 162 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 ZZEF1O43149 2961 aa17.49■□□□□ 0.39
NKX2-1-201ENST00000354822 IGHV2-70DA0A0C4DH43 119 aa17.48■□□□□ 0.39
NKX2-1-201ENST00000354822 TOX4O94842 621 aa17.48■□□□□ 0.39
NKX2-1-201ENST00000354822 NDPQ00604 133 aa17.48■□□□□ 0.39
NKX2-1-201ENST00000354822 CIARTQ8N365 385 aaPredicted RBP17.48■□□□□ 0.39
NKX2-1-201ENST00000354822 C17orf77Q96MU5 243 aa17.48■□□□□ 0.39
NKX2-1-201ENST00000354822 TXN2Q99757 166 aa17.48■□□□□ 0.39
NKX2-1-201ENST00000354822 UBTD1Q9HAC8 227 aa17.48■□□□□ 0.39
NKX2-1-201ENST00000354822 LRBAP50851 2863 aa17.48■□□□□ 0.39
NKX2-1-201ENST00000354822 C16orf54Q6UWD8 224 aa17.47■□□□□ 0.39
NKX2-1-201ENST00000354822 OR2D3Q8NGH3 330 aa17.47■□□□□ 0.39
NKX2-1-201ENST00000354822 VAMP8Q9BV40 100 aa17.47■□□□□ 0.39
NKX2-1-201ENST00000354822 FOXA3P55318 350 aaPredicted RBP17.47■□□□□ 0.39
NKX2-1-201ENST00000354822 BORCS7Q96B45 105 aa17.47■□□□□ 0.39
NKX2-1-201ENST00000354822 PGLYRP4Q96LB8 373 aa17.47■□□□□ 0.39
NKX2-1-201ENST00000354822 NCOR2Q9Y618 2525 aa17.47■□□□□ 0.39
NKX2-1-201ENST00000354822 DIRC3C9JPN6 131 aa17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 F8W735 103 aaPredicted RBP17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 NDUFS7O75251 213 aa17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 S100A7P31151 101 aa17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 PSG3Q16557 428 aa17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 SSBP4Q9BWG4 385 aaPredicted RBP17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 AAMDCQ9H7C9 122 aa17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 SERTM2A0A1B0GWG4 89 aa17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 PSG8Q9UQ74 426 aa17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 S4R3C0 116 aa17.46■□□□□ 0.39
NKX2-1-201ENST00000354822 IGHV7-81A0A0B4J1V7 117 aa17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 HSBP1O75506 76 aa17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 NIT1Q86X76 327 aa17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 ARL6IP6Q8N6S5 226 aa17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 NDUFB8O95169 186 aa17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 EGR2P11161 476 aaPredicted RBP17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 PSG9Q00887 426 aa17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 LINC00469Q8N7U9 141 aa17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 Q8N9W7 124 aa17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 LPAR2Q9HBW0 351 aa17.45■□□□□ 0.38
NKX2-1-201ENST00000354822 HIVEP3Q5T1R4 2406 aa17.44■□□□□ 0.38
NKX2-1-201ENST00000354822 RELNP78509 3460 aa17.44■□□□□ 0.38
NKX2-1-201ENST00000354822 HAX1O00165 279 aa17.44■□□□□ 0.38
NKX2-1-201ENST00000354822 RPL7P18124 248 aaKnown RBP17.44■□□□□ 0.38
NKX2-1-201ENST00000354822 CHD8Q9HCK8 2581 aa17.44■□□□□ 0.38
NKX2-1-201ENST00000354822 CSN1S1P47710 185 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms