RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 SPANXN5Q5MJ07 72 aa10.25□□□□□ -0.77
PRPF40A-201ENST00000354363 OR4D5Q8NGN0 318 aa10.25□□□□□ -0.77
PRPF40A-201ENST00000354363 OR1B1Q8NGR6 318 aa10.25□□□□□ -0.77
PRPF40A-201ENST00000354363 IGF2BP2-AS1Q96M15 143 aa10.25□□□□□ -0.77
PRPF40A-201ENST00000354363 IGLV2-18A0A075B6J9 118 aa10.25□□□□□ -0.77
PRPF40A-201ENST00000354363 AKR1C1Q04828 323 aa10.25□□□□□ -0.77
PRPF40A-201ENST00000354363 Q6ZR54 194 aa10.25□□□□□ -0.77
PRPF40A-201ENST00000354363 GPR82Q96P67 336 aa10.25□□□□□ -0.77
PRPF40A-201ENST00000354363 H3BP45 60 aa10.24□□□□□ -0.77
PRPF40A-201ENST00000354363 DAD1P61803 113 aa10.24□□□□□ -0.77
PRPF40A-201ENST00000354363 IGFL4Q6B9Z1 124 aa10.24□□□□□ -0.77
PRPF40A-201ENST00000354363 OR11H7Q8NGC8 314 aa10.24□□□□□ -0.77
PRPF40A-201ENST00000354363 DEDD2Q8WXF8 326 aa10.24□□□□□ -0.77
PRPF40A-201ENST00000354363 TMEM208Q9BTX3 173 aa10.24□□□□□ -0.77
PRPF40A-201ENST00000354363 TMEM147Q9BVK8 224 aa10.24□□□□□ -0.77
PRPF40A-201ENST00000354363 STRAPQ9Y3F4 350 aaKnown RBP10.24□□□□□ -0.77
PRPF40A-201ENST00000354363 TRAV8-2A0A0B4J237 113 aa10.23□□□□□ -0.77
PRPF40A-201ENST00000354363 CNN1P51911 297 aaKnown RBP10.23□□□□□ -0.77
PRPF40A-201ENST00000354363 RNF212Q495C1 297 aa10.23□□□□□ -0.77
PRPF40A-201ENST00000354363 TMEM88Q6PEY1 159 aa10.23□□□□□ -0.77
PRPF40A-201ENST00000354363 ACOT7LQ6ZUV0 252 aa10.23□□□□□ -0.77
PRPF40A-201ENST00000354363 TMEM144Q7Z5S9 345 aa10.23□□□□□ -0.77
PRPF40A-201ENST00000354363 H3BRN7 92 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 M0R2Z0 102 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 CRXO43186 299 aaPredicted RBP10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 DUSP14O95147 198 aaKnown RBP10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 PRM2P04554 102 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 MED14OSP0DP75 135 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 S100A7P31151 101 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 SPINK13Q1W4C9 94 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 RNF182Q8N6D2 247 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 SLC25A39Q9BZJ4 359 aaPredicted RBP10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 ZNF705GA8MUZ8 300 aaPredicted RBP10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 INSP01308 110 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 ID3Q02535 119 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 FGL1Q08830 312 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 CYP2G1PQ6ZSU1 146 aa10.22□□□□□ -0.77
PRPF40A-201ENST00000354363 SMCO3A2RU48 225 aa10.21□□□□□ -0.78
PRPF40A-201ENST00000354363 ADAP1O75689 374 aa10.21□□□□□ -0.78
PRPF40A-201ENST00000354363 UBE2MP61081 183 aaKnown RBP10.21□□□□□ -0.78
PRPF40A-201ENST00000354363 POLR2GP62487 172 aaKnown RBP eCLIP10.21□□□□□ -0.78
PRPF40A-201ENST00000354363 CCDC190Q86UF4 302 aa10.21□□□□□ -0.78
PRPF40A-201ENST00000354363 SHANK2-AS3Q9BTD1 123 aa10.21□□□□□ -0.78
PRPF40A-201ENST00000354363 HIGD1AQ9Y241 93 aa10.21□□□□□ -0.78
PRPF40A-201ENST00000354363 C9orf170A2RU37 121 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 PMS2P5A8MQ11 134 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 IL5P05113 134 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 S100A5P33763 92 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 PLP1P60201 277 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 RAP2BP61225 183 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 BAP18Q8IXM2 172 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 C15orf53Q8NAA6 179 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 ZNF738Q8NE65 137 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 PSENENQ9NZ42 101 aa10.2□□□□□ -0.78
PRPF40A-201ENST00000354363 LYRM9A8MSI8 78 aa10.19□□□□□ -0.78
PRPF40A-201ENST00000354363 HYPMO75409 117 aa10.19□□□□□ -0.78
PRPF40A-201ENST00000354363 CCNKO75909 580 aa10.19□□□□□ -0.78
PRPF40A-201ENST00000354363 RPL7P18124 248 aaKnown RBP10.19□□□□□ -0.78
PRPF40A-201ENST00000354363 B2MP61769 119 aa10.19□□□□□ -0.78
PRPF40A-201ENST00000354363 RYR1P21817 5038 aa10.19□□□□□ -0.78
PRPF40A-201ENST00000354363 TRAV12-2A0A075B6T6 113 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 PLAC8L1A1L4L8 177 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 BOLA2-SMG1P6H3BVE0 249 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 LINC00869P0C866 280 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 TSPOP30536 169 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 UHRF2Q96PU4 802 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 A0A087X0K7 114 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 SSSCA1O60232 199 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 OR5G3P0C626 314 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 CXCL3P19876 107 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 AZU1P20160 251 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 SELENOTP62341 195 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 DLK1P80370 383 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 HIST1H1AQ02539 215 aaPredicted RBP10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 SOHLH1Q5JUK2 328 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 C1orf134Q5TEV5 83 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 OR8A1Q8NGG7 326 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 SMIM8Q96KF7 97 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 SRRQ9GZT4 340 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 FLVCR2Q9UPI3 526 aa10.18□□□□□ -0.78
PRPF40A-201ENST00000354363 CCDC160A6NGH7 325 aa10.17□□□□□ -0.78
PRPF40A-201ENST00000354363 NDUFB6O95139 128 aa10.17□□□□□ -0.78
PRPF40A-201ENST00000354363 DEFB130BP0DP73 79 aa10.17□□□□□ -0.78
PRPF40A-201ENST00000354363 DEFB130AP0DP74 79 aa10.17□□□□□ -0.78
PRPF40A-201ENST00000354363 FAM3BP58499 235 aaPredicted RBP10.17□□□□□ -0.78
PRPF40A-201ENST00000354363 RRAS2P62070 204 aaPredicted RBP10.17□□□□□ -0.78
PRPF40A-201ENST00000354363 FCN2Q15485 313 aa10.17□□□□□ -0.78
PRPF40A-201ENST00000354363 PSG3Q16557 428 aa10.17□□□□□ -0.78
PRPF40A-201ENST00000354363 TMEM14EPQ6UXP3 125 aa10.17□□□□□ -0.78
PRPF40A-201ENST00000354363 METTL15P1P0C7V9 234 aa10.16□□□□□ -0.78
PRPF40A-201ENST00000354363 RHOBP62745 196 aa10.16□□□□□ -0.78
PRPF40A-201ENST00000354363 PATE2Q6UY27 113 aa10.16□□□□□ -0.78
PRPF40A-201ENST00000354363 LINC01587Q99440 93 aa10.16□□□□□ -0.78
PRPF40A-201ENST00000354363 NPVFQ9HCQ7 196 aa10.16□□□□□ -0.78
PRPF40A-201ENST00000354363 NAP1L6A6NFF2 107 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 FNDC10F2Z333 226 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 K7EPK0 472 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 MRPS12O15235 138 aaKnown RBP10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 OR4E1P0C645 316 aa10.15□□□□□ -0.78
PRPF40A-201ENST00000354363 PRB4P10163 310 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms