RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 KLF13Q9Y2Y9 288 aaPredicted RBP4.17□□□□□ -1.74
SKP1-202ENST00000353411 ZNF462Q96JM2 2506 aa4.17□□□□□ -1.74
SKP1-202ENST00000353411 CACNA1AO00555 2505 aa4.17□□□□□ -1.74
SKP1-202ENST00000353411 C15orf61A6NNL5 157 aa4.17□□□□□ -1.74
SKP1-202ENST00000353411 IFI27P40305 119 aaPredicted RBP4.17□□□□□ -1.74
SKP1-202ENST00000353411 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.17□□□□□ -1.74
SKP1-202ENST00000353411 PRADC1Q9BSG0 188 aa4.17□□□□□ -1.74
SKP1-202ENST00000353411 TRGV8A0A0C4DH27 118 aa4.17□□□□□ -1.74
SKP1-202ENST00000353411 PATE4P0C8F1 98 aa4.17□□□□□ -1.74
SKP1-202ENST00000353411 PATE1Q8WXA2 126 aa4.17□□□□□ -1.74
SKP1-202ENST00000353411 ZNF492Q9P255 531 aa4.17□□□□□ -1.74
SKP1-202ENST00000353411 TGFBR3LH3BV60 316 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 K7ERJ3 54 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 COLCA1Q6ZS62 124 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 HAX1O00165 279 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 AMTNQ6UX39 209 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 PRO1854Q9UHT4 67 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 C17orf98A8MV24 154 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 CRXO43186 299 aaPredicted RBP4.16□□□□□ -1.74
SKP1-202ENST00000353411 FAM159AQ6UWV7 190 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 NPIPB3Q92617 1050 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 MRPL20Q9BYC9 149 aaKnown RBP4.16□□□□□ -1.74
SKP1-202ENST00000353411 GATA2P23769 480 aaPredicted RBP4.16□□□□□ -1.74
SKP1-202ENST00000353411 EBLN2Q6P2I7 272 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 ZNF106Q9H2Y7 1883 aaKnown RBP4.16□□□□□ -1.74
SKP1-202ENST00000353411 COL11A2P13942 1736 aaPredicted RBP4.16□□□□□ -1.74
SKP1-202ENST00000353411 C4orf51C9J302 202 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 NDUFB3O43676 98 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 CD27P26842 260 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 NPC2P61916 151 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 SMRP1Q8NCR6 262 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 PROCRQ9UNN8 238 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 SLC25A15Q9Y619 301 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 ANXA2RQ3ZCQ2 193 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 TMEM54Q969K7 222 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 PILRAQ9UKJ1 303 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 PLXNA4Q9HCM2 1894 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 A0A0J9YW62 118 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 TCRBV4S1A1TA0A5B7 111 aa4.16□□□□□ -1.74
SKP1-202ENST00000353411 HIST1H4AP62805 103 aaKnown RBP4.16□□□□□ -1.74
SKP1-202ENST00000353411 DUX4L9Q6RFH8 374 aaPredicted RBP4.16□□□□□ -1.74
SKP1-202ENST00000353411 IGLV3-21P80748 117 aaPredicted RBP4.16□□□□□ -1.74
SKP1-202ENST00000353411 TRBV6-6A0A0A6YYG2 114 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 TRAV24A0A0B4J272 114 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 H0Y8X5 98 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 MPV17P39210 176 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 LOXL3P58215 753 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 PRSS57Q6UWY2 283 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 DEFB119Q8N690 84 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 ZNF441Q8N8Z8 693 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 PLEKHB2Q96CS7 222 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 LOXL2Q9Y4K0 774 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 LMO1P25800 156 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 RPL27AP46776 148 aaKnown RBP4.15□□□□□ -1.74
SKP1-202ENST00000353411 TEX45Q8NA69 505 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 ZNF747Q9BV97 191 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 PTPRSQ13332 1948 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 ATG2AQ2TAZ0 1938 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 UQCRQO14949 82 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 IGKV1-5P01602 117 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 NRN1LQ496H8 165 aa4.15□□□□□ -1.74
SKP1-202ENST00000353411 OSR1Q8TAX0 266 aaPredicted RBP4.15□□□□□ -1.74
SKP1-202ENST00000353411 PAX9P55771 341 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 ASCL5Q7RTU5 278 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 MCRIP2Q9BUT9 160 aaKnown RBP4.15□□□□□ -1.75
SKP1-202ENST00000353411 NUP210LQ5VU65 1888 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 IGHV3-13P01766 116 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 ZNF138P52744 262 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 DEFB108BQ8NET1 73 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 PLA2G2EQ9NZK7 142 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 PRRC2CQ9Y520 2896 aaKnown RBP4.15□□□□□ -1.75
SKP1-202ENST00000353411 TRAV12-3A0A0B4J271 114 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 FOXI3A8MTJ6 420 aaPredicted RBP4.15□□□□□ -1.75
SKP1-202ENST00000353411 CRYGCP07315 174 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 ZNF497Q6ZNH5 498 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 THBDP07204 575 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 SEC61GP60059 68 aa4.15□□□□□ -1.75
SKP1-202ENST00000353411 ZNF501Q96CX3 271 aaPredicted RBP4.15□□□□□ -1.75
SKP1-202ENST00000353411 RBMY1BA6NDE4 496 aaKnown RBP4.14□□□□□ -1.75
SKP1-202ENST00000353411 RBMY1EA6NEQ0 496 aaKnown RBP4.14□□□□□ -1.75
SKP1-202ENST00000353411 RBMY1DP0C7P1 496 aaKnown RBP4.14□□□□□ -1.75
SKP1-202ENST00000353411 RBMY1A1P0DJD3 496 aaKnown RBP4.14□□□□□ -1.75
SKP1-202ENST00000353411 RBMY1CP0DJD4 496 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 CYYR1Q96J86 154 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 ZIC3O60481 467 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 ZNF114Q8NC26 417 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 CSRP1P21291 193 aaKnown RBP4.14□□□□□ -1.75
SKP1-202ENST00000353411 SPATA12Q7Z6I5 190 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 NRTNQ99748 197 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 FAM60AQ9NP50 221 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 NUP210Q8TEM1 1887 aaPredicted RBP4.14□□□□□ -1.75
SKP1-202ENST00000353411 TRAV40A0A0B4J280 105 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 FAM236AA0A1B0GUQ0 79 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 FAM236BA0A1B0GV22 79 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 LYZL6O75951 148 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 CISD3P0C7P0 127 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 GFERP55789 205 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 CCDC140Q96MF4 163 aa4.14□□□□□ -1.75
SKP1-202ENST00000353411 FOXA2Q9Y261 457 aaPredicted RBP4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms