RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 Q6ZRG5 221 aa8.36□□□□□ -1.07
SLC28A1-202ENST00000338602 FAM24BQ8N5W8 94 aa8.36□□□□□ -1.07
SLC28A1-202ENST00000338602 ASB13Q8WXK3 278 aa8.36□□□□□ -1.07
SLC28A1-202ENST00000338602 RETNQ9HD89 108 aa8.36□□□□□ -1.07
SLC28A1-202ENST00000338602 DOK5Q9P104 306 aa8.36□□□□□ -1.07
SLC28A1-202ENST00000338602 ELOA3CA0A087WX78 387 aaPredicted RBP8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 IGSF23A1L1A6 192 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 COX7A2P2O60397 106 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 PSMB3P49720 205 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 BAXQ07812 192 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 ACTL10Q5JWF8 245 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 MORN3Q6PF18 240 aaPredicted RBP8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 IL17DQ8TAD2 202 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 MUC7Q8TAX7 377 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 PPP1R1CQ8WVI7 109 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 LINC00052Q96N35 136 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 OVOL2Q9BRP0 275 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 SHANK2-AS3Q9BTD1 123 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 RSG1Q9BU20 258 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 SLC25A39Q9BZJ4 359 aaPredicted RBP8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 ARV1Q9H2C2 271 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 WDR83OSQ9Y284 106 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 DYNC2H1Q8NCM8 4307 aaKnown RBP8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 STAB2Q8WWQ8 2551 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 UBE2L5PA0A1B0GUS4 154 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 H3BRN7 92 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 ISLRO14498 428 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 MPDU1O75352 247 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 CA1P00915 261 aaPredicted RBP8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 SPP1P10451 314 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 ATF4P18848 351 aaPredicted RBP8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 NUTF2P61970 127 aaKnown RBP8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 VWC2Q2TAL6 325 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 DEFB135Q30KP9 77 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 OR1L4Q8NGR5 311 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 GATAD1Q8WUU5 269 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 RNF183Q96D59 192 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 C16orf92Q96LL3 132 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 HYLS1Q96M11 299 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 MGST2Q99735 147 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 SLC25A32Q9H2D1 315 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 OR5AC2Q9NZP5 309 aa8.35□□□□□ -1.07
SLC28A1-202ENST00000338602 KNCNA6PVL3 124 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 MPC2O95563 127 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 LYL1P12980 280 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 FGF7P21781 194 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 EWSR1Q01844 656 aaKnown RBP eCLIP8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 C10orf113Q5VZT2 155 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 SPATA31B1PQ5VZV4 182 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 ZNF709Q8N972 641 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 OR5C1Q8NGR4 320 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 LRRC20Q8TCA0 184 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 PFDN5Q99471 154 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 RNF126Q9BV68 326 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 SCRT1Q9BWW7 348 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 EDA2RQ9HAV5 297 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 DNAJC4Q9NNZ3 241 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 BOLA1Q9Y3E2 137 aa8.34□□□□□ -1.07
SLC28A1-202ENST00000338602 FXYD6-FXYD2A0A087WZ82 144 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 H0YIZ8 118 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 RPL29P47914 159 aaKnown RBP8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 NHLH2Q02577 135 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 FGL1Q08830 312 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 LGALSLQ3ZCW2 172 aaPredicted RBP8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 EBLN2Q6P2I7 272 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 LINC00305Q7Z4B0 112 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 TRPT1Q86TN4 253 aaKnown RBP8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 C9orf62Q8N4C0 152 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 THAP6Q8TBB0 222 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 UHRF2Q96PU4 802 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 KCNIP2Q9NS61 270 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 RPRMQ9NS64 109 aa8.33□□□□□ -1.08
SLC28A1-202ENST00000338602 B2MP61769 119 aa8.32□□□□□ -1.08
SLC28A1-202ENST00000338602 MIC13Q5XKP0 118 aa8.32□□□□□ -1.08
SLC28A1-202ENST00000338602 FOXI2Q6ZQN5 318 aa8.32□□□□□ -1.08
SLC28A1-202ENST00000338602 BPIFA4PQ86YQ2 179 aa8.32□□□□□ -1.08
SLC28A1-202ENST00000338602 RARRES2Q99969 163 aa8.32□□□□□ -1.08
SLC28A1-202ENST00000338602 C1QTNF4Q9BXJ3 329 aa8.32□□□□□ -1.08
SLC28A1-202ENST00000338602 SLC39A9Q9NUM3 307 aa8.32□□□□□ -1.08
SLC28A1-202ENST00000338602 MBD2Q9UBB5 411 aa8.32□□□□□ -1.08
SLC28A1-202ENST00000338602 HMSDA8MTL9 139 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 C17orf112F2Z3M2 114 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 H3BMM0 161 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 SOCS3O14543 225 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 HLA-DRB4P13762 266 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 CXCL2P19875 107 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 RPL12P30050 165 aaKnown RBP8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 PRR20EP86478 221 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 PRR20CP86479 221 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 PRR20DP86480 221 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 PRR20BP86481 221 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 PRR20AP86496 221 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 CLINT1Q14677 625 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 OPCMLQ14982 345 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 PATE2Q6UY27 113 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 SAV1Q9H4B6 383 aaPredicted RBP8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 HSPB11Q9Y547 144 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 PXMP4Q9Y6I8 212 aa8.31□□□□□ -1.08
SLC28A1-202ENST00000338602 HLA-DRB4X5D2U9 266 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms