RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 HSD17B11Q8NBQ5 300 aa8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 GNPNAT1Q96EK6 184 aaPredicted RBP8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 HYLS1Q96M11 299 aa8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 UHRF2Q96PU4 802 aa8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 ARPC5LQ9BPX5 153 aa8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 RSG1Q9BU20 258 aa8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 SCRT1Q9BWW7 348 aa8.93□□□□□ -0.98
SPTLC1-202ENST00000337841 KANTRA0A1W2PQU2 76 aa8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 PFDN1O60925 122 aa8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 ID1P41134 155 aa8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 ACOT6Q3I5F7 207 aaPredicted RBP8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 LEMD1Q68G75 181 aa8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 RPL7L1Q6DKI1 246 aaKnown RBP8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 Q8N1Y9 231 aa8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 MRAPQ8TCY5 172 aa8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 NRN1Q9NPD7 142 aa8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 SMAD5-AS1Q9Y6J3 95 aa8.92□□□□□ -0.98
SPTLC1-202ENST00000337841 OR11H12B2RN74 326 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 K7EIL1 84 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 K7EQG2 157 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 MBP02144 154 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 CD7P09564 240 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 ATF4P18848 351 aaPredicted RBP8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 CXCL2P19875 107 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 ATP6V0CP27449 155 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 MEOX2P50222 304 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 EIF5AP63241 154 aaKnown RBP8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 SERF2P84101 59 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 FAM78BQ5VT40 261 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 SAMD13Q5VXD3 122 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 TMUB2Q71RG4 321 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 BPIFA4PQ86YQ2 179 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 FAM110AQ9BQ89 295 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 PSMG3Q9BT73 122 aaPredicted RBP8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 SLC25A32Q9H2D1 315 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 TUBA4BQ9H853 241 aa8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 SEPSECSQ9HD40 501 aaKnown RBP8.91□□□□□ -0.98
SPTLC1-202ENST00000337841 C4BPBP20851 252 aa8.9□□□□□ -0.98
SPTLC1-202ENST00000337841 SNRPD3P62318 126 aaKnown RBP8.9□□□□□ -0.98
SPTLC1-202ENST00000337841 RHOBP62745 196 aa8.9□□□□□ -0.98
SPTLC1-202ENST00000337841 ZFP69Q49AA0 526 aa8.9□□□□□ -0.98
SPTLC1-202ENST00000337841 GCSAMLQ5JQS6 135 aa8.9□□□□□ -0.98
SPTLC1-202ENST00000337841 LRRC20Q8TCA0 184 aa8.9□□□□□ -0.98
SPTLC1-202ENST00000337841 MRPL32Q9BYC8 188 aaKnown RBP8.9□□□□□ -0.98
SPTLC1-202ENST00000337841 CYTL1Q9NRR1 136 aa8.9□□□□□ -0.98
SPTLC1-202ENST00000337841 TRAV5A0A0B4J249 113 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 A0A1W2PPV4 95 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 BCL2L11O43521 198 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 M6PRP20645 277 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 LGALSLQ3ZCW2 172 aaPredicted RBP8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 OR10G4Q8NGN3 311 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 OR10G9Q8NGN4 311 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 OR10G7Q8NGN6 311 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 OR2G3Q8NGZ4 309 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 DCANP1Q8TF63 244 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 ZNF471Q9BX82 626 aaPredicted RBP8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 PGPEP1Q9NXJ5 209 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 FUT9Q9Y231 359 aa8.89□□□□□ -0.99
SPTLC1-202ENST00000337841 TAS2R45P59539 299 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 DEFB131AP59861 70 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 GUK1Q16774 197 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 DEFB125Q8N687 156 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 C16orf92Q96LL3 132 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 C19orf73Q9NVV2 129 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 TMEM14CQ9P0S9 112 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 UBQLN2Q9UHD9 624 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 RFNGQ9Y644 331 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 NOTCH1P46531 2555 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 SORL1Q92673 2214 aa8.88□□□□□ -0.99
SPTLC1-202ENST00000337841 A0A087X0K7 114 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 A8MZ25 164 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 ISLRO14498 428 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 ZNF688P0C7X2 276 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 IGHV4-30-4P0DP06 118 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 PSMB3P49720 205 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 CD300CQ08708 224 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 MORN5Q5VZ52 161 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 MIR17HGQ75NE6 70 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 LINC00052Q96N35 136 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 SH3BGRL3Q9H299 93 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 OR51M1Q9H341 326 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 SRD5A3Q9H8P0 318 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 MAP6D1Q9H9H5 199 aa8.87□□□□□ -0.99
SPTLC1-202ENST00000337841 NBEAL1Q6ZS30 2694 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 LCE2BO14633 110 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 MRPS12O15235 138 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 HIST1H1EP10412 219 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 TPT1P13693 172 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 RAB2AP61019 212 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 ODF3L2Q3SX64 289 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 TMEM41BQ5BJD5 291 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 PSMG4Q5JS54 123 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 AKR1C8PQ5T2L2 129 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 SPATA31B1PQ5VZV4 182 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 EIF5AL1Q6IS14 154 aaKnown RBP8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 FAM122CQ6P4D5 195 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 LCN15Q6UWW0 184 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 APRG1Q8IVJ8 170 aa8.86□□□□□ -0.99
SPTLC1-202ENST00000337841 BAP18Q8IXM2 172 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms