RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 POLR3KQ9Y2Y1 108 aaPredicted RBP6.65□□□□□ -1.34
HPS4-201ENST00000336873 ZNF462Q96JM2 2506 aa6.65□□□□□ -1.34
HPS4-201ENST00000336873 LEPROTL1O95214 131 aa6.65□□□□□ -1.35
HPS4-201ENST00000336873 IGKV3-20P01619 116 aa6.65□□□□□ -1.35
HPS4-201ENST00000336873 PAX1P15863 534 aa6.65□□□□□ -1.35
HPS4-201ENST00000336873 TXNDC17Q9BRA2 123 aa6.65□□□□□ -1.35
HPS4-201ENST00000336873 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.35
HPS4-201ENST00000336873 CTSZQ9UBR2 303 aa6.65□□□□□ -1.35
HPS4-201ENST00000336873 CDC42EP3Q9UKI2 254 aa6.65□□□□□ -1.35
HPS4-201ENST00000336873 DOPEY1Q5JWR5 2465 aa6.65□□□□□ -1.35
HPS4-201ENST00000336873 NPIPB5A8MRT5 1133 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 A8MWL6 223 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 SPRY2O43597 315 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 GPR183P32249 361 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 Q6ZS92 163 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 SLC25A48Q6ZT89 311 aaKnown RBP6.64□□□□□ -1.35
HPS4-201ENST00000336873 TMEM219Q86XT9 240 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 RAB1BQ9H0U4 201 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 F11RQ9Y624 299 aaKnown RBP6.64□□□□□ -1.35
HPS4-201ENST00000336873 GOSR1O95249 250 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 IGHV1-8P0DP01 117 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 NMUP48645 174 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 TWIST1Q15672 202 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 SAMD13Q5VXD3 122 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 TMEM133Q9H2Q1 129 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 TMEM14BQ9NUH8 114 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 IGLV3-9A0A075B6K5 115 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 F2RL2O00254 374 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 IGLV1-44P01699 117 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 IGHV3-11P01762 117 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 HLA-DQA1P01909 254 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 PRSS1P07477 247 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 SRD5A1P18405 259 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 APOBEC3AP31941 199 aaPredicted RBP6.64□□□□□ -1.35
HPS4-201ENST00000336873 MC5RP33032 325 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 FBLN7Q53RD9 439 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 NUP35Q8NFH5 326 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 FBXL7Q9UJT9 491 aa6.64□□□□□ -1.35
HPS4-201ENST00000336873 IGHV2-26A0A0B4J1V2 119 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 hDV102S1A0JD36 115 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 RBX1P62877 108 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 TPTE2P1Q5T6R2 138 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 UNQ5815/PRO19632Q6UWF5 114 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 BPIFA4PQ86YQ2 179 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 OR4A5Q8NH83 315 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 GLMPQ8WWB7 406 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 TET2Q6N021 2002 aaPredicted RBP6.63□□□□□ -1.35
HPS4-201ENST00000336873 C3orf79P0CE67 100 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 S100A4P26447 101 aaKnown RBP6.63□□□□□ -1.35
HPS4-201ENST00000336873 NBL1P41271 181 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 PAFAH1B2P68402 229 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 ZNF672Q499Z4 452 aaPredicted RBP6.63□□□□□ -1.35
HPS4-201ENST00000336873 KLHDC1Q8N7A1 406 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 EPDR1Q9UM22 224 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 IGKV2-40A0A087WW87 121 aaPredicted RBP6.63□□□□□ -1.35
HPS4-201ENST00000336873 TCRBV4S1A1TA0A5B7 111 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 NCR2O95944 276 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 IGKV2D-40P01614 121 aaPredicted RBP6.63□□□□□ -1.35
HPS4-201ENST00000336873 MIEN1Q9BRT3 115 aa6.63□□□□□ -1.35
HPS4-201ENST00000336873 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.62□□□□□ -1.35
HPS4-201ENST00000336873 SMKR1H3BMG3 65 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 SELENOTP62341 195 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 FOXL1Q12952 345 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 UBE2V1Q13404 147 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 ZNF324O75467 553 aaPredicted RBP6.62□□□□□ -1.35
HPS4-201ENST00000336873 NDPQ00604 133 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 TMEM75Q8N9X5 138 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 ZC2HC1AQ96GY0 325 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 ZNF257Q9Y2Q1 563 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 COX19Q49B96 90 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 BRD3OSQ6XYD6 125 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 GPR82Q96P67 336 aa6.62□□□□□ -1.35
HPS4-201ENST00000336873 LOC105371242A0A075B767 164 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 IGHV1-3A0A0C4DH29 117 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 OR4C46A6NHA9 309 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 NUDT3O95989 172 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 EVI2AP22794 236 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 SMAGPQ0VAQ4 97 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 V9GYV3 84 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 CELSR1Q9NYQ6 3014 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 CCL25O15444 150 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 APOHP02749 345 aaPredicted RBP6.61□□□□□ -1.35
HPS4-201ENST00000336873 LIPFP07098 398 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 LOXP28300 417 aaPredicted RBP6.61□□□□□ -1.35
HPS4-201ENST00000336873 C1orf194Q5T5A4 169 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 NIT1Q86X76 327 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 CHRDL1Q9BU40 450 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 CKS2P33552 79 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 CA7P43166 264 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 LGALS7P47929 136 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 HBBP68871 147 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 RUSC1-AS1Q66K80 236 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 CLEC19AQ6UXS0 136 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 CSTL1Q9H114 145 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 CHODLQ9H9P2 273 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 DPM3Q9P2X0 92 aa6.61□□□□□ -1.35
HPS4-201ENST00000336873 A0A1W2PRE2 83 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 A0A1W2PS18 150 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 GPX1P07203 203 aa6.6□□□□□ -1.35
HPS4-201ENST00000336873 HLA-DMBP28068 263 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms