RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 FAM222BQ8WU58 562 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 PERPQ96FX8 193 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 MS4A6AQ9H2W1 248 aa11.06□□□□□ -0.64
SYNE3-201ENST00000334258 TRAV8-1A0A0A6YYK1 113 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 FAM231BA6NCW3 169 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 APELAP0DMC3 54 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 PRB4P10163 310 aaPredicted RBP11.05□□□□□ -0.64
SYNE3-201ENST00000334258 KIR2DL2P43627 348 aaPredicted RBP11.05□□□□□ -0.64
SYNE3-201ENST00000334258 MSMPQ1L6U9 139 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 C7orf69Q9H7B7 122 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 AP5S1Q9NUS5 200 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 C1RLQ9NZP8 487 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 APOHP02749 345 aaPredicted RBP11.05□□□□□ -0.64
SYNE3-201ENST00000334258 FA2HQ7L5A8 372 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 RPRMLQ8N4K4 120 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 NDUFA4L2Q9NRX3 87 aa11.05□□□□□ -0.64
SYNE3-201ENST00000334258 SOX21Q9Y651 276 aaPredicted RBP11.05□□□□□ -0.64
SYNE3-201ENST00000334258 hADV38S2A0JD32 116 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 M0R1B8 84 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 WT1-ASQ06250 92 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 TMEM97Q5BJF2 176 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 HCP5Q6MZN7 132 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 GTF2H5Q6ZYL4 71 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 TEX45Q8NA69 505 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 OR8A1Q8NGG7 326 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 MRPL36Q9P0J6 103 aaKnown RBP11.04□□□□□ -0.64
SYNE3-201ENST00000334258 ZNF207O43670 478 aaKnown RBP11.04□□□□□ -0.64
SYNE3-201ENST00000334258 PRNTQ86SH4 94 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 CIARTQ8N365 385 aaPredicted RBP11.04□□□□□ -0.64
SYNE3-201ENST00000334258 C9orf106Q8NAJ2 232 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 ZFYVE26Q68DK2 2539 aa11.04□□□□□ -0.64
SYNE3-201ENST00000334258 H3BUT2 72 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 TMEM116Q8NCL8 245 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 OSR1Q8TAX0 266 aaPredicted RBP11.03□□□□□ -0.64
SYNE3-201ENST00000334258 RAB37Q96AX2 223 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 NDFIP1Q9BT67 221 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 RPUSD1Q9UJJ7 312 aaKnown RBP11.03□□□□□ -0.64
SYNE3-201ENST00000334258 HILPDAQ9Y5L2 63 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 FAM87AP0C7U9 286 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 IGLC1P0CG04 106 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 COX8AP10176 69 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 CSN1S1P47710 185 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 FOXE3Q13461 319 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 SLC25A48Q6ZT89 311 aaKnown RBP11.03□□□□□ -0.64
SYNE3-201ENST00000334258 Q9H3A6 140 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 RNF7Q9UBF6 113 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 FMC1Q96HJ9 113 aa11.03□□□□□ -0.64
SYNE3-201ENST00000334258 DSCAMO60469 2012 aa11.02□□□□□ -0.64
SYNE3-201ENST00000334258 LOC389332A0A1B0GUA5 103 aa11.02□□□□□ -0.65
SYNE3-201ENST00000334258 TCRAP04437 139 aa11.02□□□□□ -0.65
SYNE3-201ENST00000334258 SRSF12Q8WXF0 261 aaKnown RBP11.02□□□□□ -0.65
SYNE3-201ENST00000334258 MLST8Q9BVC4 326 aa11.02□□□□□ -0.65
SYNE3-201ENST00000334258 PRSS22Q9GZN4 317 aa11.02□□□□□ -0.65
SYNE3-201ENST00000334258 CFHR2P36980 270 aa11.02□□□□□ -0.65
SYNE3-201ENST00000334258 RPL24P83731 157 aaKnown RBP11.02□□□□□ -0.65
SYNE3-201ENST00000334258 GOLT1AQ6ZVE7 132 aa11.02□□□□□ -0.65
SYNE3-201ENST00000334258 KLF12Q9Y4X4 402 aa11.02□□□□□ -0.65
SYNE3-201ENST00000334258 IGKV1D-37A0A075B6S9 117 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 ENSAO43768 121 aaKnown RBP11.01□□□□□ -0.65
SYNE3-201ENST00000334258 SEC11AP67812 179 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 ODF1Q14990 250 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 GUSBP1Q15486 140 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 ZNF788Q6ZQV5 615 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 OR10X1Q8NGY0 326 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 NEU4Q8WWR8 484 aaPredicted RBP11.01□□□□□ -0.65
SYNE3-201ENST00000334258 SS18L2Q9UHA2 77 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 CSMD1Q96PZ7 3565 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 A6NDN8 102 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 MYCNOSP40205 109 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 TNFAIP6P98066 277 aaPredicted RBP11.01□□□□□ -0.65
SYNE3-201ENST00000334258 CT83Q5H943 113 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 LINC01545Q5VT33 79 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 BHLHA15Q7RTS1 189 aaPredicted RBP11.01□□□□□ -0.65
SYNE3-201ENST00000334258 OR10AG1Q8NH19 301 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 ZNF479Q96JC4 524 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 SIGMAR1Q99720 223 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 ASCL2Q99929 193 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 MED13LQ71F56 2210 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 C1orf162Q8NEQ5 155 aaPredicted RBP11.01□□□□□ -0.65
SYNE3-201ENST00000334258 PROCRQ9UNN8 238 aa11.01□□□□□ -0.65
SYNE3-201ENST00000334258 A0A1B0GUT8 65 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 NCR2O95944 276 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 LTAP01374 205 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 IGLV1-44P01699 117 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 C2orf91Q6ZV80 131 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 OR4A5Q8NH83 315 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 RALYQ9UKM9 306 aaKnown RBP11□□□□□ -0.65
SYNE3-201ENST00000334258 C19orf71A6NCJ1 209 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 CCL3L1P16619 93 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 PLP1P60201 277 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 VSTM2AQ8TAG5 236 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 ZNF747Q9BV97 191 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 DCHS2Q6V1P9 2916 aa11□□□□□ -0.65
SYNE3-201ENST00000334258 K7EQM0 130 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 LHBP01229 141 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 ARMS2P0C7Q2 107 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 EXOC3-AS1Q8N2X6 119 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 OR4C13Q8NGP0 309 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 GFRA4Q9GZZ7 299 aa10.99□□□□□ -0.65
SYNE3-201ENST00000334258 ZNF492Q9P255 531 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms