RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 IBA57Q5T440 356 aaKnown RBP14.31□□□□□ -0.12
CCDC43-201ENST00000315286 OR4F17Q8NGA8 305 aa14.31□□□□□ -0.12
CCDC43-201ENST00000315286 MS4A10Q96PG2 267 aa14.31□□□□□ -0.12
CCDC43-201ENST00000315286 TRBV19A0A075B6N1 114 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 GPR183P32249 361 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 RPL15P61313 204 aaKnown RBP14.3□□□□□ -0.12
CCDC43-201ENST00000315286 RPEL1Q2QD12 228 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 LINC00527Q9UJ94 153 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 IGHV3-35A0A0C4DH35 117 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 SCGB2A1O75556 95 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 CLEC3BP05452 202 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 GATA3P23771 443 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 LINC01356Q8N9X3 169 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 ZNF414Q96IQ9 312 aa14.3□□□□□ -0.12
CCDC43-201ENST00000315286 CDX1P47902 265 aaPredicted RBP14.29□□□□□ -0.12
CCDC43-201ENST00000315286 C9orf152Q5JTZ5 239 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 GFI1BQ5VTD9 330 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 S100A7AQ86SG5 101 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 MAPK1IP1LQ8NDC0 245 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 RNF24Q9Y225 148 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 TRAV41A0A0B4J266 112 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 A6NDX4 124 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 IFITM10A6NMD0 228 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 C19orf54Q5BKX5 351 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 OR8I2Q8N0Y5 310 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 SERTAD4Q9NUC0 356 aa14.29□□□□□ -0.12
CCDC43-201ENST00000315286 ZANQ9Y493 2812 aa14.28□□□□□ -0.12
CCDC43-201ENST00000315286 TRAV9-1A0A075B6T8 112 aa14.28□□□□□ -0.12
CCDC43-201ENST00000315286 CCDC140Q96MF4 163 aa14.28□□□□□ -0.12
CCDC43-201ENST00000315286 GPR82Q96P67 336 aa14.28□□□□□ -0.12
CCDC43-201ENST00000315286 TRAPPC1Q9Y5R8 145 aa14.28□□□□□ -0.12
CCDC43-201ENST00000315286 IGHV3OR16-8A0A075B7F1 116 aa14.27□□□□□ -0.12
CCDC43-201ENST00000315286 CLEC19AQ6UXS0 136 aa14.27□□□□□ -0.12
CCDC43-201ENST00000315286 SIGLEC15Q6ZMC9 328 aa14.27□□□□□ -0.12
CCDC43-201ENST00000315286 CMTM2Q8TAZ6 248 aa14.27□□□□□ -0.12
CCDC43-201ENST00000315286 FMC1Q96HJ9 113 aa14.27□□□□□ -0.12
CCDC43-201ENST00000315286 ZNF705GA8MUZ8 300 aaPredicted RBP14.27□□□□□ -0.13
CCDC43-201ENST00000315286 S100A9P06702 114 aaKnown RBP14.27□□□□□ -0.13
CCDC43-201ENST00000315286 CRIP2P52943 208 aaPredicted RBP14.27□□□□□ -0.13
CCDC43-201ENST00000315286 PRR27Q6MZM9 219 aa14.27□□□□□ -0.13
CCDC43-201ENST00000315286 C12orf57Q99622 126 aa14.27□□□□□ -0.13
CCDC43-201ENST00000315286 MLST8Q9BVC4 326 aa14.27□□□□□ -0.13
CCDC43-201ENST00000315286 RABAC1Q9UI14 185 aa14.27□□□□□ -0.13
CCDC43-201ENST00000315286 NAV2Q8IVL1 2488 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 CA1P00915 261 aaPredicted RBP14.26□□□□□ -0.13
CCDC43-201ENST00000315286 S100A8P05109 93 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 FRMD6-AS1P0C7T7 363 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 MEOX2P50222 304 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 TOMM20LQ6UXN7 152 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 FAM231DQ6ZW35 169 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 NUDT10Q8NFP7 164 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 EEF1AKMT3Q96AZ1 226 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 NUDT11Q96G61 164 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 TRAV8-1A0A0A6YYK1 113 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 LTAP01374 205 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 TCL1AP56279 114 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 GOLT1AQ6ZVE7 132 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 HIST3H2BBQ8N257 126 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 LYPD1Q8N2G4 141 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 PITPNC1Q9UKF7 332 aa14.26□□□□□ -0.13
CCDC43-201ENST00000315286 CHD6Q8TD26 2715 aa14.25□□□□□ -0.13
CCDC43-201ENST00000315286 SMIM27A0A1W2PRY6 76 aa14.25□□□□□ -0.13
CCDC43-201ENST00000315286 RNF223E7ERA6 249 aa14.25□□□□□ -0.13
CCDC43-201ENST00000315286 TGFAP01135 160 aa14.25□□□□□ -0.13
CCDC43-201ENST00000315286 PDZD11Q5EBL8 140 aa14.25□□□□□ -0.13
CCDC43-201ENST00000315286 SMIM12Q96EX1 92 aa14.25□□□□□ -0.13
CCDC43-201ENST00000315286 GPR61Q9BZJ8 451 aa14.25□□□□□ -0.13
CCDC43-201ENST00000315286 GNB4Q9HAV0 340 aa14.25□□□□□ -0.13
CCDC43-201ENST00000315286 TRBV7-1A0A0A6YYK4 115 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 BMPR1BO00238 502 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 SPINK4O60575 86 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 IGLV2-11P01706 119 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 IGF1P05019 195 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 BLCAPP62952 87 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 ZFAND3Q9H8U3 227 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 GAR1Q9NY12 217 aaKnown RBP14.24□□□□□ -0.13
CCDC43-201ENST00000315286 GATCO43716 136 aaKnown RBP14.24□□□□□ -0.13
CCDC43-201ENST00000315286 IGHG2P01859 326 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 PRB4P10163 310 aaPredicted RBP14.24□□□□□ -0.13
CCDC43-201ENST00000315286 CBLN1P23435 193 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 ATP5G2Q06055 141 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 MBD6Q96DN6 1003 aa14.24□□□□□ -0.13
CCDC43-201ENST00000315286 XKRY2A2RUG3 117 aa14.23□□□□□ -0.13
CCDC43-201ENST00000315286 RPL7P18124 248 aaKnown RBP14.23□□□□□ -0.13
CCDC43-201ENST00000315286 SLC35B1P78383 322 aa14.23□□□□□ -0.13
CCDC43-201ENST00000315286 LOXL1Q08397 574 aaPredicted RBP14.23□□□□□ -0.13
CCDC43-201ENST00000315286 DEFB113Q30KQ7 82 aa14.23□□□□□ -0.13
CCDC43-201ENST00000315286 LINC00322Q6ZN03 302 aaPredicted RBP14.23□□□□□ -0.13
CCDC43-201ENST00000315286 Q6ZS46 218 aa14.23□□□□□ -0.13
CCDC43-201ENST00000315286 NOL4LQ96MY1 436 aaPredicted RBP14.23□□□□□ -0.13
CCDC43-201ENST00000315286 CR1P17927 2039 aa14.23□□□□□ -0.13
CCDC43-201ENST00000315286 M0R3E3 92 aa14.22□□□□□ -0.13
CCDC43-201ENST00000315286 IER3P46695 156 aa14.22□□□□□ -0.13
CCDC43-201ENST00000315286 PDE6HQ13956 83 aa14.22□□□□□ -0.13
CCDC43-201ENST00000315286 Q86TA4 180 aa14.22□□□□□ -0.13
CCDC43-201ENST00000315286 BEX4Q9NWD9 120 aaPredicted RBP14.22□□□□□ -0.13
CCDC43-201ENST00000315286 SMAD5-AS1Q9Y6J3 95 aa14.22□□□□□ -0.13
CCDC43-201ENST00000315286 M0QZK8 103 aa14.22□□□□□ -0.13
CCDC43-201ENST00000315286 TRGV3P03979 118 aa14.22□□□□□ -0.13
CCDC43-201ENST00000315286 PRNTQ86SH4 94 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms