RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 C11orf71Q6IPW1 123 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 RPP21Q9H633 154 aaKnown RBP9.12□□□□□ -0.95
PTPN2-201ENST00000309660 FBXL7Q9UJT9 491 aa9.12□□□□□ -0.95
PTPN2-201ENST00000309660 VWC2LB2RUY7 222 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 HSBP1O75506 76 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 Q0VG73 95 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 NOL4LQ96MY1 436 aaPredicted RBP9.11□□□□□ -0.95
PTPN2-201ENST00000309660 RNF5Q99942 180 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 NRN1Q9NPD7 142 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 A0A1W2PS18 150 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 M0QZ24 198 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 GPX1P07203 203 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 ATOH7Q8N100 152 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 FMC1Q96HJ9 113 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 CHRDL1Q9BU40 450 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 ITPR1Q14643 2758 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 M0R1W7 72 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 ZNF491Q8N8L2 437 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 NDUFAF3Q9BU61 184 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 BPESC1Q9GZL8 116 aa9.11□□□□□ -0.95
PTPN2-201ENST00000309660 TMSB15BA0A087X1C1 80 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 A8MWL6 223 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 DIRC3C9JPN6 131 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 TOMM40O96008 361 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 HLA-DRB1P01911 266 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 COX19Q49B96 90 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 CCDC144NLQ6NUI1 221 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 FAM231DQ6ZW35 169 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 KCNS1Q96KK3 526 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 VAMP8Q9BV40 100 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 OTORQ9NRC9 128 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 BATFQ16520 125 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 FAM120AOSQ5T036 256 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 IGFL4Q6B9Z1 124 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 MBD6Q96DN6 1003 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 C21orf62Q9NYP8 219 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 CELSR1Q9NYQ6 3014 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 NDUFB8O95169 186 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 GNLYP22749 145 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 MFAP4P55083 255 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 PLP1P60201 277 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 PVRIGQ6DKI7 326 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 Q86TA4 180 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 C18orf32Q8TCD1 76 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 GTSF1Q8WW33 167 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 BORCS7Q96B45 105 aa9.1□□□□□ -0.95
PTPN2-201ENST00000309660 IGHV3OR16-13A0A075B7E8 117 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 IGHV3-74A0A0B4J1X5 117 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 ZNF324O75467 553 aaPredicted RBP9.09□□□□□ -0.95
PTPN2-201ENST00000309660 PMCHL1Q16048 86 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 FANCD2OSQ96PS1 177 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 SHANK2-AS3Q9BTD1 123 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 MRPL27Q9P0M9 148 aaKnown RBP9.09□□□□□ -0.95
PTPN2-201ENST00000309660 CHEK1O14757 476 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 EREGO14944 169 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 LTAP01374 205 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 RNF224P0DH78 156 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 HOXB4P17483 251 aaPredicted RBP9.09□□□□□ -0.95
PTPN2-201ENST00000309660 OR10J3Q5JRS4 329 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 ZNF562Q6V9R5 426 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 C7orf69Q9H7B7 122 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 KLF12Q9Y4X4 402 aa9.09□□□□□ -0.95
PTPN2-201ENST00000309660 TRBV19A0A075B6N1 114 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 ODF3BA8MYP8 253 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 C19orf84I3L1E1 186 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 HBBP68871 147 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 MLST8Q9BVC4 326 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 ACACBO00763 2458 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 IGHV3-66A0A0C4DH42 116 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 MUC21A0A0G2JKD1 596 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 MUC21A0A140T8X8 626 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 NDUFA3O95167 84 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 MUC21Q5SSG8 566 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 C1orf194Q5T5A4 169 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 LCN12Q6JVE5 192 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 M0R2Z0 102 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 CSN3P07498 182 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 NPBQ8NG41 125 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 THYN1Q9P016 225 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 ZFYVE26Q68DK2 2539 aa9.08□□□□□ -0.96
PTPN2-201ENST00000309660 H3BRN7 92 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 K7EQM0 130 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 GPR183P32249 361 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 SAA4P35542 130 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 UNQ5815/PRO19632Q6UWF5 114 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 AAMDCQ9H7C9 122 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 IGHV3-49A0A0A0MS15 119 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 ZC2HC1AQ96GY0 325 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 ZMAT5Q9UDW3 170 aaKnown RBP9.07□□□□□ -0.96
PTPN2-201ENST00000309660 LINC00527Q9UJ94 153 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 FAM208BQ5VWN6 2430 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 MYO18BQ8IUG5 2567 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 IGLV11-55A0A075B6I3 123 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 H0Y8G0 127 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 FAM106CPP0CH98 169 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 DTX2Q86UW9 622 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 PSG8Q9UQ74 426 aa9.07□□□□□ -0.96
PTPN2-201ENST00000309660 CSPG4Q6UVK1 2322 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 C3orf79P0CE67 100 aa9.06□□□□□ -0.96
PTPN2-201ENST00000309660 SIGLEC15Q6ZMC9 328 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms