RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 BAGE2Q86Y30 109 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 ABHD12Q8N2K0 398 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 SIGLECL1Q8N7X8 197 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF439Q8NDP4 499 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 OR5T1Q8NG75 326 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 OR1L6Q8NGR2 347 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 RFESDQ8TAC1 157 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 C22orf15Q8WYQ4 148 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 TMEM68Q96MH6 324 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF714Q96N38 554 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 DUX5Q96PT3 197 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 VAMP8Q9BV40 100 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 PATZ1Q9HBE1 687 aaKnown RBP3.88□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF586Q9NXT0 402 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 BET1LQ9NYM9 111 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 IDI2-AS1Q9NZ38 188 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 MRPL27Q9P0M9 148 aaKnown RBP3.88□□□□□ -1.79
CKS1B-201ENST00000308987 TP53TG3Q9ULZ0 132 aa3.88□□□□□ -1.79
CKS1B-201ENST00000308987 SOX21Q9Y651 276 aaPredicted RBP3.88□□□□□ -1.79
CKS1B-201ENST00000308987 HUWE1Q7Z6Z7 4374 aaKnown RBP3.87□□□□□ -1.79
CKS1B-201ENST00000308987 IGLV3-9A0A075B6K5 115 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 IGHV3-43A0A0B4J1X8 118 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 SMIM27A0A1W2PRY6 76 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 IZUMO1RA6ND01 250 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 SNURFLB1AK76 121 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 J3QR06 171 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 TRIAP1O43715 76 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 NUPR1O60356 82 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF253O75346 499 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 C8orf88P0DMB2 117 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 IGHV3-43DP0DP04 118 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 CBLN1P23435 193 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 GLRXP35754 106 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 IER3P46695 156 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 MRPS11P82912 194 aaKnown RBP3.87□□□□□ -1.79
CKS1B-201ENST00000308987 MEF2CQ06413 473 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-201ENST00000308987 PMCHL1Q16048 86 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 PRSS8Q16651 343 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 C17orf58Q2M2W7 97 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 SPINK9Q5DT21 86 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 CT45A1Q5HYN5 189 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 KLF17Q5JT82 389 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-201ENST00000308987 COL5A1-AS1Q5SY13 56 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 OR4A47Q6IF82 309 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 FAM71F2Q6NXP2 309 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 TMEM136Q6ZRR5 245 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 SLC25A48Q6ZT89 311 aaKnown RBP3.87□□□□□ -1.79
CKS1B-201ENST00000308987 ATP5L2Q7Z4Y8 100 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 KLHDC1Q8N7A1 406 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 C8orf31Q8N9H6 132 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 OR4P4Q8NGL7 312 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 OR1L4Q8NGR5 311 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 OR4A5Q8NH83 315 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 CT45A3Q8NHU0 189 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 OSR1Q8TAX0 266 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF418Q8TF45 676 aaPredicted RBP3.87□□□□□ -1.79
CKS1B-201ENST00000308987 KCNS1Q96KK3 526 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 OR2V2Q96R30 315 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 NABP2Q9BQ15 211 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 HSPB9Q9BQS6 159 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 SLC25A33Q9BSK2 321 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 SAMD10Q9BYL1 202 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 PLEKHA3Q9HB20 300 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 SEPSECSQ9HD40 501 aaKnown RBP3.87□□□□□ -1.79
CKS1B-201ENST00000308987 DYNLRB1Q9NP97 96 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 DCAF16Q9NXF7 216 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 RPUSD1Q9UJJ7 312 aaKnown RBP3.87□□□□□ -1.79
CKS1B-201ENST00000308987 PPIAL4AQ9Y536 164 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 OR51B2Q9Y5P1 312 aa3.87□□□□□ -1.79
CKS1B-201ENST00000308987 TRAV3A0A0B4J244 114 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 A0A1W2PN81 502 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 PGPEP1LA6NFU8 196 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 SLC17A3O00476 420 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 DLEU1O43261 78 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF324O75467 553 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 OR2J3O76001 311 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 IGLV2-8P01709 118 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 SAA2P0DJI9 122 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 RNASE2P10153 161 aaKnown RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 DEFA4P12838 97 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 CTRLP40313 264 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF134P52741 427 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 SUB1P53999 127 aaKnown RBP eCLIP3.86□□□□□ -1.792e-57■■■■■ 200.7
CKS1B-201ENST00000308987 PRRX1P54821 245 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 KLF3P57682 345 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 SELENOVP59797 346 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 RPS16P62249 146 aaKnown RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 CCL8P80075 99 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 PAX2Q02962 417 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 KLF5Q13887 457 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 EDDM3AQ14507 147 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 PSG5Q15238 335 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 RPL39P5Q59GN2 51 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 CENPWQ5EE01 88 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 SPATA31B1PQ5VZV4 182 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 STUMQ69YW2 141 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 FAM53AQ6NSI3 398 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 ZNF705AQ6ZN79 300 aaPredicted RBP3.86□□□□□ -1.79
CKS1B-201ENST00000308987 TCF23Q7RTU1 214 aa3.86□□□□□ -1.79
CKS1B-201ENST00000308987 TPRX1Q8N7U7 411 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms