RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 IL36BQ9NZH7 164 aa8.65□□□□□ -1.03
SYNPO2-201ENST00000307142 DYSFO75923 2080 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 WDR86Q86TI4 376 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 LINC00477Q96M19 166 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 MGST2Q99735 147 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 LINC00862A6NCI5 91 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 ETV2O00321 342 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 SUPT4H1P63272 117 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 TREML4Q6UXN2 200 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 ZNF138P52744 262 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 FOXL1Q12952 345 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 C17orf58Q2M2W7 97 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 ORMDL3Q8N138 153 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 TMEM158Q8WZ71 300 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 NDUFA3O95167 84 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 CDX1P47902 265 aaPredicted RBP8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 MST1LQ2TV78 715 aa8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 SEPSECSQ9HD40 501 aaKnown RBP8.64□□□□□ -1.03
SYNPO2-201ENST00000307142 LOC107984156A0A0G2JMH3 177 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 CCL24O00175 119 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 ARL17AQ8IVW1 177 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 FOLR2P14207 255 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 ZNF833PQ6ZTB9 187 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 DEFB104AQ8WTQ1 72 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 ZNF524Q96C55 264 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 DSCAMO60469 2012 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 JOSD1Q15040 202 aaPredicted RBP8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 IGHV2-70P01814 119 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 IGHV4-39P01824 125 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 GFI1BQ5VTD9 330 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 IFT22Q9H7X7 185 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 A0A1W2PPI3 338 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 IGHV4-38-2P0DP08 117 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 ZNF506Q5JVG8 444 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 JKAMPQ9P055 326 aa8.63□□□□□ -1.03
SYNPO2-201ENST00000307142 VPS25Q9BRG1 176 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 A0A1B0GW15 77 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 NMBP08949 121 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 CD28P10747 220 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 GGTLC1Q9BX51 225 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 RPL36AP83881 106 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 RPL36ALQ969Q0 106 aaKnown RBP8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 SDHCQ99643 169 aaPredicted RBP8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 F2Z2F3 143 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 EREGO14944 169 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 IGKV1-5P01602 117 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 TDGF1P3P51864 188 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 ZNF414Q96IQ9 312 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 FOXC2Q99958 501 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 RNF126Q9BV68 326 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 OTOGLQ3ZCN5 2332 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 ATP5LO75964 103 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 NDUFB8O95169 186 aa8.62□□□□□ -1.03
SYNPO2-201ENST00000307142 SPATA45Q537H7 98 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 SPATA31B1PQ5VZV4 182 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 SRCAPQ6ZRS2 3230 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 CHD3Q12873 2000 aaKnown RBP8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 IZUMO1RA6ND01 250 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 CIDEAO60543 219 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 ID3Q02535 119 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 ABCA1O95477 2261 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 CKS1BP61024 79 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 Q8TAT8 98 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 GZMBP10144 247 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 ERCC8Q13216 396 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 A0A1W2PRE2 83 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 LDLRAD4O15165 306 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 HOXA5P20719 270 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 DAZAP2Q15038 168 aaPredicted RBP8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 DNAL4O96015 105 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 MLANAQ16655 118 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 DKK4Q9UBT3 224 aa8.61□□□□□ -1.03
SYNPO2-201ENST00000307142 TRAV8-6A0A0B4J262 113 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 LMO1P25800 156 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 FHL1Q13642 323 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 Q8NA96 180 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 C22orf46C9J442 243 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 QRFPP83859 136 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 RNF182Q8N6D2 247 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 RNASE2P10153 161 aaKnown RBP8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 CCL20P78556 96 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 DEFB136Q30KP8 78 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 C9orf66Q5T8R8 295 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 C10orf105Q8TEF2 133 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 ST6GALNAC6Q969X2 333 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 PSG3Q16557 428 aa8.6□□□□□ -1.03
SYNPO2-201ENST00000307142 ZNF25P17030 456 aaPredicted RBP8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 SRSF1Q07955 248 aaKnown RBP eCLIP8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 WDR83OSQ9Y284 106 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 ITGB1BP1O14713 200 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 TMEM95Q3KNT9 176 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 MED12LQ86YW9 2145 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 ATOH7Q8N100 152 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 C8orf86Q6ZUL3 223 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 IGFBPL1Q8WX77 278 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 ARHGAP21Q5T5U3 1957 aa8.59□□□□□ -1.03
SYNPO2-201ENST00000307142 PTPRQQ9UMZ3 2332 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms