RNA–Protein interactions for RNA: ENST00000262965.9

TCF3-201, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-201ENST00000262965 KLRD1Q13241 179 aa11.07□□□□□ -0.64
TCF3-201ENST00000262965 SLC25A48Q6ZT89 311 aaKnown RBP11.07□□□□□ -0.64
TCF3-201ENST00000262965 BCL6BQ8N143 479 aaPredicted RBP11.07□□□□□ -0.64
TCF3-201ENST00000262965 NXT2Q9NPJ8 142 aaKnown RBP11.07□□□□□ -0.64
TCF3-201ENST00000262965 MBNL3Q9NUK0 354 aaKnown RBP11.07□□□□□ -0.64
TCF3-201ENST00000262965 LURAP1LQ8IV03 231 aa11.07□□□□□ -0.64
TCF3-201ENST00000262965 RNASE2P10153 161 aaKnown RBP11.06□□□□□ -0.64
TCF3-201ENST00000262965 CD59P13987 128 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 C10orf91Q5T1B1 145 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 TPTE2P1Q5T6R2 138 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 ANAPC10Q9UM13 185 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 PLXNA4Q9HCM2 1894 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 IGHV2-26A0A0B4J1V2 119 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 WNT2P09544 360 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 AMN1Q8IY45 258 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 SLC25A15Q9Y619 301 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 CHD3Q12873 2000 aaKnown RBP11.06□□□□□ -0.64
TCF3-201ENST00000262965 NACAE9PAV3 2078 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 MYO9AB2RTY4 2548 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 TRAV8-2A0A0B4J237 113 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 SAMD5Q5TGI4 173 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 PIMREGQ9BSJ6 248 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 PLSCR4Q9NRQ2 329 aa11.06□□□□□ -0.64
TCF3-201ENST00000262965 ZNF503-AS2A6NEH8 195 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 DNAL4O96015 105 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 IGHV1-8P0DP01 117 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 COLCA1Q6ZS62 124 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 IGKCP01834 107 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 SEC11AP67812 179 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 HAPLN4Q86UW8 402 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 TMEM167AQ8TBQ9 72 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 C7orf69Q9H7B7 122 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 TRAV12-3A0A0B4J271 114 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 A0A0G2JLM5 398 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 H0YJW9 148 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 TSPAN13O95857 204 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 NPSP0C0P6 89 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 HSD52Q0P140 79 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 STPG4Q8N801 248 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 PPBPP02775 128 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 IL15RAQ13261 267 aa11.05□□□□□ -0.64
TCF3-201ENST00000262965 ITLN2Q8WWU7 325 aaPredicted RBP11.05□□□□□ -0.64
TCF3-201ENST00000262965 A0A1B0GWJ7 208 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 NPFFO15130 113 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 UBE2V1Q13404 147 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 C15orf32Q32M92 178 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 TRAV2A0A0B4J234 112 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 SRSF1Q07955 248 aaKnown RBP eCLIP11.04□□□□□ -0.64
TCF3-201ENST00000262965 ZC2HC1BQ5TFG8 222 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 Q6ZWC4 215 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 TMEM219Q86XT9 240 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 C18orf32Q8TCD1 76 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 CYSLTR1Q9Y271 337 aa11.04□□□□□ -0.64
TCF3-201ENST00000262965 IGHV1-3A0A0C4DH29 117 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 ARMS2P0C7Q2 107 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 LYPD2Q6UXB3 125 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 SLC50A1Q9BRV3 221 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 NDPQ00604 133 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 TMEM95Q3KNT9 176 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 ZNF672Q499Z4 452 aaPredicted RBP11.03□□□□□ -0.64
TCF3-201ENST00000262965 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 MS4A6AQ9H2W1 248 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 PROK2Q9HC23 129 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 IGHV4-39P01824 125 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 DUX4L9Q6RFH8 374 aaPredicted RBP11.03□□□□□ -0.64
TCF3-201ENST00000262965 PIEZO2Q9H5I5 2752 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 MDS2Q8NDY4 140 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 RNF166Q96A37 237 aaPredicted RBP11.03□□□□□ -0.64
TCF3-201ENST00000262965 GAFA1Q96PS6 74 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 VCX2Q9H322 139 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 LY96Q9Y6Y9 160 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 SORL1Q92673 2214 aa11.03□□□□□ -0.64
TCF3-201ENST00000262965 TMEM178BH3BS89 294 aa11.02□□□□□ -0.64
TCF3-201ENST00000262965 IFI27P40305 119 aaPredicted RBP11.02□□□□□ -0.64
TCF3-201ENST00000262965 WDR86Q86TI4 376 aa11.02□□□□□ -0.64
TCF3-201ENST00000262965 MOB4Q9Y3A3 225 aa11.02□□□□□ -0.65
TCF3-201ENST00000262965 A0A1W2PPI3 338 aa11.02□□□□□ -0.65
TCF3-201ENST00000262965 NEU4Q8WWR8 484 aaPredicted RBP11.02□□□□□ -0.65
TCF3-201ENST00000262965 GAGE12BA1L429 117 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 TMEM262E9PQX1 116 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 H7C1H1 209 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 LCNL1Q6ZST4 164 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 TRGV9Q99603 122 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 MRPL27Q9P0M9 148 aaKnown RBP11.01□□□□□ -0.65
TCF3-201ENST00000262965 SIGLEC9Q9Y336 463 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 CHTOPQ9Y3Y2 248 aaKnown RBP11.01□□□□□ -0.65
TCF3-201ENST00000262965 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 ETV2O00321 342 aaPredicted RBP11.01□□□□□ -0.65
TCF3-201ENST00000262965 HOXA3O43365 443 aaPredicted RBP11.01□□□□□ -0.65
TCF3-201ENST00000262965 CSRP1P21291 193 aaKnown RBP11.01□□□□□ -0.65
TCF3-201ENST00000262965 GTSF1LQ9H1H1 148 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 SLAQ13239 276 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 ZNF474Q6S9Z5 364 aaPredicted RBP11.01□□□□□ -0.65
TCF3-201ENST00000262965 C20orf144Q9BQM9 153 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 TRAV21A0A0B4J279 112 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 OR5A1Q8NGJ0 315 aa11.01□□□□□ -0.65
TCF3-201ENST00000262965 SH2D1AO60880 128 aa11□□□□□ -0.65
TCF3-201ENST00000262965 ERVK11-1P61568 191 aa11□□□□□ -0.65
TCF3-201ENST00000262965 KIR3DS1Q14943 382 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms