RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeast

Gene NIP7, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIP7	YPL211W	BFA1	P47113	574 aa		4.13	□□□□□ -1.75
NIP7	YPL211W	RCR2	Q03446	210 aa	Known RBP	4.13	□□□□□ -1.75
NIP7	YPL211W	CHS5	Q12114	671 aa	Known RBP	4.13	□□□□□ -1.75
NIP7	YPL211W	NUP145	P49687	1317 aa		4.13	□□□□□ -1.75
NIP7	YPL211W	ERG20	P08524	352 aa	Known RBP	4.12	□□□□□ -1.75
NIP7	YPL211W	OSM1	P21375	501 aa	Known RBP	4.12	□□□□□ -1.75
NIP7	YPL211W	PRD1	P25375	712 aa		4.12	□□□□□ -1.75
NIP7	YPL211W	YKU70	P32807	602 aa		4.12	□□□□□ -1.75
NIP7	YPL211W	CUE2	P36075	443 aa	Known RBP	4.12	□□□□□ -1.75
NIP7	YPL211W	CKB2	P38930	258 aa		4.12	□□□□□ -1.75
NIP7	YPL211W	YIL166C	P40445	542 aa		4.12	□□□□□ -1.75
NIP7	YPL211W	YJR142W	P47173	342 aa		4.12	□□□□□ -1.75
NIP7	YPL211W	YGR151C	P53287	111 aa		4.12	□□□□□ -1.75
NIP7	YPL211W	YMR210W	Q03649	449 aa		4.12	□□□□□ -1.75
NIP7	YPL211W	THI73	Q07904	523 aa		4.12	□□□□□ -1.75
NIP7	YPL211W	CLF1	Q12309	687 aa	Predicted RBP	4.12	□□□□□ -1.75
NIP7	YPL211W	POM34	Q12445	299 aa		4.12	□□□□□ -1.75
NIP7	YPL211W	RPS9B	P05755	195 aa	Known RBP	4.11	□□□□□ -1.75
NIP7	YPL211W	SEC15	P22224	910 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	PRP28	P23394	588 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	ADY2	P25613	283 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	FUB1	P25659	250 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	SEC6	P32844	805 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	FLO10	P36170	1169 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	KSP1	P38691	1029 aa	Known RBP	4.11	□□□□□ -1.75
NIP7	YPL211W	RET2	P43621	546 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	BIT61	P47041	543 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	MPS3	P47069	682 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	YPS7	Q06325	596 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	YDL144C	Q07589	356 aa		4.11	□□□□□ -1.75
NIP7	YPL211W	RPS21B	Q3E754	87 aa	Known RBP	4.11	□□□□□ -1.75
NIP7	YPL211W	SPO11	P23179	398 aa		4.1	□□□□□ -1.75
NIP7	YPL211W	KCC4	P25389	1037 aa		4.1	□□□□□ -1.75
NIP7	YPL211W	PET127	P32606	800 aa		4.1	□□□□□ -1.75
NIP7	YPL211W	COS111	P38308	924 aa		4.1	□□□□□ -1.75
NIP7	YPL211W	MPP10	P47083	593 aa	Known RBP	4.1	□□□□□ -1.75
NIP7	YPL211W	YGR153W	P48238	217 aa		4.1	□□□□□ -1.75
NIP7	YPL211W	LYS4	P49367	693 aa	Predicted RBP	4.1	□□□□□ -1.75
NIP7	YPL211W	NMA2	P53204	395 aa		4.1	□□□□□ -1.75
NIP7	YPL211W	YNL050C	P53952	270 aa		4.1	□□□□□ -1.75
NIP7	YPL211W	UTP14	Q04500	899 aa	Known RBP	4.1	□□□□□ -1.75
NIP7	YPL211W	YDL086W	Q07505	273 aa		4.1	□□□□□ -1.75
NIP7	YPL211W	RPP0	P05317	312 aa	Known RBP	4.09	□□□□□ -1.75
NIP7	YPL211W	TUB1	P09733	447 aa	Known RBP	4.09	□□□□□ -1.75
NIP7	YPL211W	ABF1	P14164	731 aa		4.09	□□□□□ -1.75
NIP7	YPL211W	YPT7	P32939	208 aa		4.09	□□□□□ -1.75
NIP7	YPL211W	GMH1	P36125	273 aa		4.09	□□□□□ -1.75
NIP7	YPL211W	KHA1	P40309	873 aa		4.09	□□□□□ -1.75
NIP7	YPL211W	SPC98	P53540	846 aa		4.09	□□□□□ -1.75
NIP7	YPL211W	MTQ2	Q03920	221 aa	Predicted RBP	4.09	□□□□□ -1.75
NIP7	YPL211W	VBA4	Q04602	768 aa	Known RBP	4.09	□□□□□ -1.75
NIP7	YPL211W	YFT2	Q06676	274 aa		4.09	□□□□□ -1.75
NIP7	YPL211W	LYS2	P07702	1392 aa		4.08	□□□□□ -1.76
NIP7	YPL211W	IME1	P21190	360 aa		4.08	□□□□□ -1.76
NIP7	YPL211W	KIN82	P25341	720 aa		4.08	□□□□□ -1.76
NIP7	YPL211W	CTP1	P38152	299 aa		4.08	□□□□□ -1.76
NIP7	YPL211W	YEL020C	P39994	560 aa		4.08	□□□□□ -1.76
NIP7	YPL211W	VPS27	P40343	622 aa	Known RBP	4.08	□□□□□ -1.76
NIP7	YPL211W	UTP10	P42945	1769 aa	Known RBP	4.08	□□□□□ -1.76
NIP7	YPL211W	APM1	Q00776	475 aa	Predicted RBP	4.08	□□□□□ -1.76
NIP7	YPL211W	ARO10	Q06408	635 aa		4.08	□□□□□ -1.76
NIP7	YPL211W	RTT109	Q07794	436 aa		4.08	□□□□□ -1.76
NIP7	YPL211W	ALE1	Q08548	619 aa		4.08	□□□□□ -1.76
NIP7	YPL211W	YGR161W-C	Q3E744	92 aa		4.08	□□□□□ -1.76
NIP7	YPL211W	LAM4	P38800	1345 aa		4.07	□□□□□ -1.76
NIP7	YPL211W	SWI6	P09959	803 aa		4.07	□□□□□ -1.76
NIP7	YPL211W	SEC65	P29478	273 aa		4.07	□□□□□ -1.76
NIP7	YPL211W	MSS1	P32559	526 aa	Predicted RBP	4.07	□□□□□ -1.76
NIP7	YPL211W	MAM1	P40065	302 aa		4.07	□□□□□ -1.76
NIP7	YPL211W	BUD8	P41698	603 aa		4.07	□□□□□ -1.76
NIP7	YPL211W	DIP5	P53388	608 aa		4.07	□□□□□ -1.76
NIP7	YPL211W	NOP15	P53927	220 aa	Predicted RBP	4.07	□□□□□ -1.76
NIP7	YPL211W	HEF3	P53978	1044 aa	Known RBP	4.07	□□□□□ -1.76
NIP7	YPL211W	ECM9	Q02202	377 aa		4.07	□□□□□ -1.76
NIP7	YPL211W	UME1	Q03010	460 aa		4.07	□□□□□ -1.76
NIP7	YPL211W	RMT2	Q03305	412 aa		4.07	□□□□□ -1.76
NIP7	YPL211W	RPS17A	P02407	136 aa	Known RBP	4.06	□□□□□ -1.76
NIP7	YPL211W	GLN4	P13188	809 aa	Known RBP	4.06	□□□□□ -1.76
NIP7	YPL211W	STE12	P13574	688 aa		4.06	□□□□□ -1.76
NIP7	YPL211W	RPS17B	P14127	136 aa	Known RBP	4.06	□□□□□ -1.76
NIP7	YPL211W	SUI2	P20459	304 aa	Known RBP	4.06	□□□□□ -1.76
NIP7	YPL211W	ELF1	P36053	145 aa		4.06	□□□□□ -1.76
NIP7	YPL211W	HXT6	P39003	570 aa	Known RBP	4.06	□□□□□ -1.76
NIP7	YPL211W	HXT7	P39004	570 aa		4.06	□□□□□ -1.76
NIP7	YPL211W	CCT5	P40413	562 aa	Known RBP	4.06	□□□□□ -1.76
NIP7	YPL211W	GPG1	P53130	126 aa		4.06	□□□□□ -1.76
NIP7	YPL211W	YHM2	Q04013	314 aa		4.06	□□□□□ -1.76
NIP7	YPL211W	YSH1	Q06224	779 aa	Predicted RBP	4.06	□□□□□ -1.76
NIP7	YPL211W	STP4	Q07351	490 aa		4.06	□□□□□ -1.76
NIP7	YPL211W	CDC45	Q08032	650 aa		4.06	□□□□□ -1.76
NIP7	YPL211W	BMS1	Q08965	1183 aa	Known RBP	4.06	□□□□□ -1.76
NIP7	YPL211W	BUG1	Q12191	341 aa		4.06	□□□□□ -1.76
NIP7	YPL211W	NTH1	P32356	751 aa		4.05	□□□□□ -1.76
NIP7	YPL211W	PRS1	P32895	427 aa	Known RBP	4.05	□□□□□ -1.76
NIP7	YPL211W	APL3	P38065	1025 aa		4.05	□□□□□ -1.76
NIP7	YPL211W	FAT1	P38225	669 aa		4.05	□□□□□ -1.76
NIP7	YPL211W	MUP3	P38734	546 aa		4.05	□□□□□ -1.76
NIP7	YPL211W	DUN1	P39009	513 aa		4.05	□□□□□ -1.76
NIP7	YPL211W	MIT1	P40002	666 aa		4.05	□□□□□ -1.76
NIP7	YPL211W	PXA1	P41909	870 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms