RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C LRO1P40345 661 aa3.96□□□□□ -1.78
WHI3YNL197C PHO23P50947 330 aa3.96□□□□□ -1.78
WHI3YNL197C FHN1P53279 174 aa3.96□□□□□ -1.78
WHI3YNL197C ENT2Q05785 613 aa3.96□□□□□ -1.78
WHI3YNL197C ADY4Q05955 493 aa3.96□□□□□ -1.78
WHI3YNL197C TRM8Q12009 286 aa3.96□□□□□ -1.78
WHI3YNL197C CHS5Q12114 671 aaKnown RBP3.96□□□□□ -1.78
WHI3YNL197C TUF1P02992 437 aaKnown RBP3.95□□□□□ -1.78
WHI3YNL197C MET3P08536 511 aa3.95□□□□□ -1.78
WHI3YNL197C UBC1P21734 215 aaKnown RBP3.95□□□□□ -1.78
WHI3YNL197C PRP28P23394 588 aa3.95□□□□□ -1.78
WHI3YNL197C RIT1P23796 513 aa3.95□□□□□ -1.78
WHI3YNL197C MVD1P32377 396 aaKnown RBP3.95□□□□□ -1.78
WHI3YNL197C XRS2P33301 854 aa3.95□□□□□ -1.78
WHI3YNL197C SMK1P41808 388 aa3.95□□□□□ -1.78
WHI3YNL197C AVT1P47082 602 aa3.95□□□□□ -1.78
WHI3YNL197C IMA1P53051 589 aa3.95□□□□□ -1.78
WHI3YNL197C MRPL13Q02204 264 aa3.95□□□□□ -1.78
WHI3YNL197C CLU1Q03690 1277 aaKnown RBP3.95□□□□□ -1.78
WHI3YNL197C YDR056CQ12025 205 aa3.95□□□□□ -1.78
WHI3YNL197C SSM4P40318 1319 aa3.94□□□□□ -1.78
WHI3YNL197C BIK1P11709 440 aa3.94□□□□□ -1.78
WHI3YNL197C ELM1P32801 640 aa3.94□□□□□ -1.78
WHI3YNL197C RRN3P36070 627 aa3.94□□□□□ -1.78
WHI3YNL197C STB5P38699 743 aa3.94□□□□□ -1.78
WHI3YNL197C TMN3P40071 706 aa3.94□□□□□ -1.78
WHI3YNL197C KHA1P40309 873 aa3.94□□□□□ -1.78
WHI3YNL197C MDR1P53258 950 aa3.94□□□□□ -1.78
WHI3YNL197C TRS31Q03337 283 aa3.94□□□□□ -1.78
WHI3YNL197C AIM41Q12032 185 aa3.94□□□□□ -1.78
WHI3YNL197C MLH3Q12083 715 aa3.94□□□□□ -1.78
WHI3YNL197C YKL033W-AQ86ZR7 236 aa3.94□□□□□ -1.78
WHI3YNL197C VPS33P20795 691 aa3.94□□□□□ -1.78
WHI3YNL197C CLB4P24871 460 aa3.94□□□□□ -1.78
WHI3YNL197C PHO11P35842 467 aa3.94□□□□□ -1.78
WHI3YNL197C PHO12P38693 467 aa3.94□□□□□ -1.78
WHI3YNL197C AXL2P38928 823 aa3.94□□□□□ -1.78
WHI3YNL197C MNT3P40549 630 aa3.94□□□□□ -1.78
WHI3YNL197C MPS3P47069 682 aa3.94□□□□□ -1.78
WHI3YNL197C YGR054WP53235 642 aaKnown RBP3.94□□□□□ -1.78
WHI3YNL197C VID22Q05934 901 aa3.94□□□□□ -1.78
WHI3YNL197C OPY2Q06810 360 aa3.94□□□□□ -1.78
WHI3YNL197C IZH3Q07959 543 aa3.94□□□□□ -1.78
WHI3YNL197C FRE5Q08908 694 aa3.94□□□□□ -1.78
WHI3YNL197C ICL2Q12031 575 aa3.94□□□□□ -1.78
WHI3YNL197C MIS1P09440 975 aaKnown RBP3.93□□□□□ -1.78
WHI3YNL197C GUK1P15454 187 aaKnown RBP3.93□□□□□ -1.78
WHI3YNL197C THR1P17423 357 aaKnown RBP3.93□□□□□ -1.78
WHI3YNL197C SEC15P22224 910 aa3.93□□□□□ -1.78
WHI3YNL197C EFT1P32324 842 aaKnown RBP3.93□□□□□ -1.78
WHI3YNL197C FMP52P40008 231 aa3.93□□□□□ -1.78
WHI3YNL197C PIG2P40187 538 aa3.93□□□□□ -1.78
WHI3YNL197C CTF18P49956 741 aa3.93□□□□□ -1.78
WHI3YNL197C COS12P53053 380 aa3.93□□□□□ -1.78
WHI3YNL197C AIM6Q07716 390 aa3.93□□□□□ -1.78
WHI3YNL197C YLR040CQ07988 224 aa3.93□□□□□ -1.78
WHI3YNL197C ZRT2Q12436 422 aa3.93□□□□□ -1.78
WHI3YNL197C PCK1P10963 549 aa3.93□□□□□ -1.78
WHI3YNL197C HSC82P15108 705 aaKnown RBP3.93□□□□□ -1.78
WHI3YNL197C ERG4P25340 473 aa3.93□□□□□ -1.78
WHI3YNL197C MRPL7P36519 292 aa3.93□□□□□ -1.78
WHI3YNL197C RAD26P40352 1085 aa3.93□□□□□ -1.78
WHI3YNL197C CLF1Q12309 687 aaPredicted RBP3.93□□□□□ -1.78
WHI3YNL197C NUC1P08466 329 aa3.92□□□□□ -1.78
WHI3YNL197C BET2P20133 325 aa3.92□□□□□ -1.78
WHI3YNL197C PRE2P30656 287 aaKnown RBP3.92□□□□□ -1.78
WHI3YNL197C ARP2P32381 391 aaKnown RBP3.92□□□□□ -1.78
WHI3YNL197C RPN12P32496 274 aa3.92□□□□□ -1.78
WHI3YNL197C CBF2P32504 956 aa3.92□□□□□ -1.78
WHI3YNL197C DEF1P35732 738 aaKnown RBP3.92□□□□□ -1.78
WHI3YNL197C CTP1P38152 299 aa3.92□□□□□ -1.78
WHI3YNL197C VFA1P40080 203 aa3.92□□□□□ -1.78
WHI3YNL197C BST1P43571 1029 aa3.92□□□□□ -1.78
WHI3YNL197C SNF12P53628 566 aa3.92□□□□□ -1.78
WHI3YNL197C CSR1Q06705 408 aaKnown RBP3.92□□□□□ -1.78
WHI3YNL197C NTO1Q12311 748 aa3.92□□□□□ -1.78
WHI3YNL197C RER1P25560 188 aa3.91□□□□□ -1.78
WHI3YNL197C RPS7AP26786 190 aaKnown RBP3.91□□□□□ -1.78
WHI3YNL197C CTS1P29029 562 aa3.91□□□□□ -1.78
WHI3YNL197C CHS3P29465 1165 aa3.91□□□□□ -1.78
WHI3YNL197C UBS1P38290 277 aa3.91□□□□□ -1.78
WHI3YNL197C NPR3P38742 1146 aa3.91□□□□□ -1.78
WHI3YNL197C PPE1P38796 400 aa3.91□□□□□ -1.78
WHI3YNL197C MPT5P39016 859 aaKnown RBP RIP-Chip data3.91□□□□□ -1.78 RIP-Chip
WHI3YNL197C YJL193WP39542 402 aa3.91□□□□□ -1.78
WHI3YNL197C YEL025CP39991 1188 aa3.91□□□□□ -1.78
WHI3YNL197C YER010CP40011 234 aa3.91□□□□□ -1.78
WHI3YNL197C PSF2P40359 213 aa3.91□□□□□ -1.78
WHI3YNL197C DPH1P40487 425 aaKnown RBP3.91□□□□□ -1.78
WHI3YNL197C IMP2'P32351 346 aa3.91□□□□□ -1.78
WHI3YNL197C REV7P38927 245 aa3.91□□□□□ -1.78
WHI3YNL197C UPF3P48412 387 aaKnown RBP3.91□□□□□ -1.78
WHI3YNL197C TEL2P53038 688 aa3.91□□□□□ -1.78
WHI3YNL197C RNT1Q02555 471 aa3.91□□□□□ -1.78
WHI3YNL197C EFR3Q03653 782 aaKnown RBP3.91□□□□□ -1.78
WHI3YNL197C USA1Q03714 838 aa3.91□□□□□ -1.78
WHI3YNL197C HOF1Q05080 669 aa3.91□□□□□ -1.78
WHI3YNL197C SUL2Q12325 893 aa3.91□□□□□ -1.78
WHI3YNL197C PCD1Q12524 340 aa3.91□□□□□ -1.78
WHI3YNL197C PPR1P07272 904 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms