RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C CAD1P24813 409 aaKnown RBP12.63□□□□□ -0.39
BDF1YLR399C PCA1P38360 1216 aa12.63□□□□□ -0.39
BDF1YLR399C YJL206CP39529 758 aa12.63□□□□□ -0.39
BDF1YLR399C YJL055WP47044 245 aa12.63□□□□□ -0.39
BDF1YLR399C ATP22P50273 684 aaPredicted RBP12.63□□□□□ -0.39
BDF1YLR399C LSG1P53145 640 aaKnown RBP12.63□□□□□ -0.39
BDF1YLR399C SYF1Q04048 859 aaPredicted RBP12.63□□□□□ -0.39
BDF1YLR399C YDL114WQ07530 308 aa12.63□□□□□ -0.39
BDF1YLR399C SMC5Q08204 1093 aa12.63□□□□□ -0.39
BDF1YLR399C BBP1Q12365 385 aa12.63□□□□□ -0.39
BDF1YLR399C RKM4Q12504 494 aa12.63□□□□□ -0.39
BDF1YLR399C APM4Q99186 491 aa12.63□□□□□ -0.39
BDF1YLR399C URA7P28274 579 aaKnown RBP12.62□□□□□ -0.39
BDF1YLR399C MUM2P38236 366 aa12.62□□□□□ -0.39
BDF1YLR399C AVT6P40074 448 aa12.62□□□□□ -0.39
BDF1YLR399C ALY2P47029 1046 aa12.62□□□□□ -0.39
BDF1YLR399C RPA49Q01080 415 aaPredicted RBP12.62□□□□□ -0.39
BDF1YLR399C YOR342CQ12182 319 aa12.62□□□□□ -0.39
BDF1YLR399C TEF1P02994 458 aaKnown RBP12.61□□□□□ -0.39
BDF1YLR399C PHO8P11491 566 aa12.61□□□□□ -0.39
BDF1YLR399C KRE2P27809 442 aa12.61□□□□□ -0.39
BDF1YLR399C HSP78P33416 811 aa12.61□□□□□ -0.39
BDF1YLR399C GIP1P38229 639 aa12.61□□□□□ -0.39
BDF1YLR399C VPS45P38932 577 aa12.61□□□□□ -0.39
BDF1YLR399C DOT5P40553 215 aa12.61□□□□□ -0.39
BDF1YLR399C TY4A-JP47023 414 aa12.61□□□□□ -0.39
BDF1YLR399C ERB1Q04660 807 aaKnown RBP12.61□□□□□ -0.39
BDF1YLR399C SGO1Q08490 590 aa12.61□□□□□ -0.39
BDF1YLR399C YIG1Q08956 461 aa12.61□□□□□ -0.39
BDF1YLR399C HRT3Q12347 344 aa12.61□□□□□ -0.39
BDF1YLR399C FLO11P08640 1367 aa12.61□□□□□ -0.39
BDF1YLR399C ZIP1P31111 875 aa12.61□□□□□ -0.39
BDF1YLR399C UTP9P38882 575 aaKnown RBP12.61□□□□□ -0.39
BDF1YLR399C POL31P46957 487 aa12.61□□□□□ -0.39
BDF1YLR399C SLU7Q02775 382 aaKnown RBP12.61□□□□□ -0.39
BDF1YLR399C FAR10Q06001 478 aa12.61□□□□□ -0.39
BDF1YLR399C AAD15Q08361 143 aa12.61□□□□□ -0.39
BDF1YLR399C RKM1Q08961 583 aaPredicted RBP12.61□□□□□ -0.39
BDF1YLR399C SAM3Q08986 587 aa12.61□□□□□ -0.39
BDF1YLR399C MCM1P11746 286 aa12.6□□□□□ -0.39
BDF1YLR399C RSR1P13856 272 aa12.6□□□□□ -0.39
BDF1YLR399C HBS1P32769 611 aaKnown RBP12.6□□□□□ -0.39
BDF1YLR399C BDF1P35817 686 aa12.6□□□□□ -0.39
BDF1YLR399C MAE1P36013 669 aaKnown RBP12.6□□□□□ -0.39
BDF1YLR399C KAP104P38217 918 aaKnown RBP12.6□□□□□ -0.39
BDF1YLR399C SSZ1P38788 538 aaKnown RBP12.6□□□□□ -0.39
BDF1YLR399C PEP8P40335 379 aa12.6□□□□□ -0.39
BDF1YLR399C HPM1P40481 377 aa12.6□□□□□ -0.39
BDF1YLR399C ARK1P53974 638 aa12.6□□□□□ -0.39
BDF1YLR399C IVY1Q04934 453 aa12.6□□□□□ -0.39
BDF1YLR399C CCR4P31384 837 aaKnown RBP12.6□□□□□ -0.39
BDF1YLR399C NTR2P36118 322 aaPredicted RBP12.6□□□□□ -0.39
BDF1YLR399C NDT80P38830 627 aa12.6□□□□□ -0.39
BDF1YLR399C PEA2P40091 420 aa12.6□□□□□ -0.39
BDF1YLR399C MRK1P50873 501 aa12.6□□□□□ -0.39
BDF1YLR399C YMR226CQ05016 267 aaKnown RBP12.6□□□□□ -0.39
BDF1YLR399C GYP1Q08484 637 aa12.6□□□□□ -0.39
BDF1YLR399C SNF4P12904 322 aa12.59□□□□□ -0.39
BDF1YLR399C CAF20P12962 161 aaKnown RBP12.59□□□□□ -0.39
BDF1YLR399C CDC20P26309 610 aa12.59□□□□□ -0.39
BDF1YLR399C PMC1P38929 1173 aaPredicted RBP12.59□□□□□ -0.39
BDF1YLR399C PIK1P39104 1066 aa12.59□□□□□ -0.39
BDF1YLR399C IRC5P43610 853 aa12.59□□□□□ -0.39
BDF1YLR399C PSP2P50109 593 aaKnown RBP12.59□□□□□ -0.39
BDF1YLR399C SWP1Q02795 286 aa12.59□□□□□ -0.39
BDF1YLR399C PSR1Q07800 427 aa12.59□□□□□ -0.39
BDF1YLR399C SRM1P21827 482 aa12.58□□□□□ -0.39
BDF1YLR399C PWP2P25635 923 aaKnown RBP12.58□□□□□ -0.39
BDF1YLR399C GDA1P32621 518 aa12.58□□□□□ -0.39
BDF1YLR399C PEX5P35056 612 aa12.58□□□□□ -0.39
BDF1YLR399C YBR285WP38354 144 aa12.58□□□□□ -0.39
BDF1YLR399C PAN5P38787 379 aa12.58□□□□□ -0.39
BDF1YLR399C THI20Q08224 551 aa12.58□□□□□ -0.39
BDF1YLR399C SAM2P19358 384 aaKnown RBP12.58□□□□□ -0.4
BDF1YLR399C PTP2P29461 750 aa12.58□□□□□ -0.4
BDF1YLR399C HEM12P32347 362 aaPredicted RBP12.58□□□□□ -0.4
BDF1YLR399C CTP1P38152 299 aa12.58□□□□□ -0.4
BDF1YLR399C YHR112CP38716 378 aa12.58□□□□□ -0.4
BDF1YLR399C TMN3P40071 706 aa12.58□□□□□ -0.4
BDF1YLR399C TVP15Q03860 143 aa12.58□□□□□ -0.4
BDF1YLR399C WRS1Q12109 432 aaKnown RBP12.58□□□□□ -0.4
BDF1YLR399C RPN13O13563 156 aa12.57□□□□□ -0.4
BDF1YLR399C REP1P03871 373 aa12.57□□□□□ -0.4
BDF1YLR399C PRE8P23639 250 aa12.57□□□□□ -0.4
BDF1YLR399C GBP2P25555 427 aaKnown RBP RIP-Chip data12.57□□□□□ -0.4not detected
BDF1YLR399C ACH1P32316 526 aa12.57□□□□□ -0.4
BDF1YLR399C AFG2P32794 780 aa12.57□□□□□ -0.4
BDF1YLR399C TBS1P38114 1094 aa12.57□□□□□ -0.4
BDF1YLR399C RIM2P38127 377 aa12.57□□□□□ -0.4
BDF1YLR399C SEO1P39709 593 aa12.57□□□□□ -0.4
BDF1YLR399C YJL045WP47052 634 aa12.57□□□□□ -0.4
BDF1YLR399C ORC5P50874 479 aa12.57□□□□□ -0.4
BDF1YLR399C RMR1P53060 241 aa12.57□□□□□ -0.4
BDF1YLR399C CEF1Q03654 590 aaPredicted RBP12.57□□□□□ -0.4
BDF1YLR399C MF(ALPHA)1P01149 165 aa12.57□□□□□ -0.4
BDF1YLR399C YBR139WP38109 508 aa12.57□□□□□ -0.4
BDF1YLR399C APM2P38700 605 aa12.57□□□□□ -0.4
BDF1YLR399C MPT5P39016 859 aaKnown RBP RIP-Chip data12.57□□□□□ -0.4 RIP-Chip
BDF1YLR399C IRC6P43615 237 aa12.57□□□□□ -0.4
BDF1YLR399C YNL058CP53947 316 aa12.57□□□□□ -0.4
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms