RNA–Protein interactions for RNA: YLR193C

UPS1, Transcript of Phosphatidic acid transfer protein, yeastyeast

Gene UPS1, Length 528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS1YLR193C AI5_ALPHAQ9ZZX1 630 aa2.29□□□□□ -2.04
UPS1YLR193C CPA2P03965 1118 aaKnown RBP2.28□□□□□ -2.04
UPS1YLR193C RPL7AP05737 244 aaKnown RBP2.28□□□□□ -2.04
UPS1YLR193C HEM1P09950 548 aaPredicted RBP2.28□□□□□ -2.04
UPS1YLR193C RPS21AP0C0V8 87 aaKnown RBP2.28□□□□□ -2.04
UPS1YLR193C WHI2P12611 486 aa2.28□□□□□ -2.04
UPS1YLR193C CDC26P14724 124 aa2.28□□□□□ -2.04
UPS1YLR193C TUP1P16649 713 aa2.28□□□□□ -2.04
UPS1YLR193C HOP1P20050 605 aa2.28□□□□□ -2.04
UPS1YLR193C MRPL9P31334 269 aa2.28□□□□□ -2.04
UPS1YLR193C DGR2P32330 852 aa2.28□□□□□ -2.04
UPS1YLR193C MTC7P32633 139 aa2.28□□□□□ -2.04
UPS1YLR193C RPC34P32910 317 aa2.28□□□□□ -2.04
UPS1YLR193C LOT5P34234 306 aa2.28□□□□□ -2.04
UPS1YLR193C FAT1P38225 669 aa2.28□□□□□ -2.04
UPS1YLR193C YHR033WP38690 423 aa2.28□□□□□ -2.04
UPS1YLR193C LRO1P40345 661 aa2.28□□□□□ -2.04
UPS1YLR193C VID28P40547 921 aa2.28□□□□□ -2.04
UPS1YLR193C GPP1P41277 250 aaKnown RBP2.28□□□□□ -2.04
UPS1YLR193C SNO3P43544 222 aa2.28□□□□□ -2.04
UPS1YLR193C YJR142WP47173 342 aa2.28□□□□□ -2.04
UPS1YLR193C BPL1P48445 690 aaPredicted RBP2.28□□□□□ -2.04
UPS1YLR193C GPG1P53130 126 aa2.28□□□□□ -2.04
UPS1YLR193C YGL081WP53156 320 aa2.28□□□□□ -2.04
UPS1YLR193C COQ6P53318 479 aa2.28□□□□□ -2.04
UPS1YLR193C ATP23P53722 227 aa2.28□□□□□ -2.04
UPS1YLR193C BUD17P53727 317 aa2.28□□□□□ -2.04
UPS1YLR193C YNL018CP53976 612 aa2.28□□□□□ -2.04
UPS1YLR193C TRS23Q03784 219 aa2.28□□□□□ -2.04
UPS1YLR193C ENT2Q05785 613 aa2.28□□□□□ -2.04
UPS1YLR193C ARR3Q06598 404 aa2.28□□□□□ -2.04
UPS1YLR193C YCG1Q06680 1035 aa2.28□□□□□ -2.04
UPS1YLR193C RPL7BQ12213 244 aaKnown RBP2.28□□□□□ -2.04
UPS1YLR193C HMG2P12684 1045 aa2.27□□□□□ -2.05
UPS1YLR193C BEM3P32873 1128 aa2.27□□□□□ -2.05
UPS1YLR193C CCL1P37366 393 aa2.27□□□□□ -2.05
UPS1YLR193C OPT1P40897 799 aa2.27□□□□□ -2.05
UPS1YLR193C DUG1P43616 481 aaKnown RBP2.27□□□□□ -2.05
UPS1YLR193C YGR237CP50089 785 aa2.27□□□□□ -2.05
UPS1YLR193C PIP2P52960 996 aa2.27□□□□□ -2.05
UPS1YLR193C DOS2P54858 310 aa2.27□□□□□ -2.05
UPS1YLR193C RPS15Q01855 142 aaKnown RBP2.27□□□□□ -2.05
UPS1YLR193C TIM50Q02776 476 aa2.27□□□□□ -2.05
UPS1YLR193C USA1Q03714 838 aa2.27□□□□□ -2.05
UPS1YLR193C FAP7Q12055 197 aaPredicted RBP2.27□□□□□ -2.05
UPS1YLR193C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
UPS1YLR193C VPS33P20795 691 aa2.26□□□□□ -2.05
UPS1YLR193C AEP2P22136 580 aa2.26□□□□□ -2.05
UPS1YLR193C BRN1P38170 754 aa2.26□□□□□ -2.05
UPS1YLR193C SRP68P38687 599 aaKnown RBP2.26□□□□□ -2.05
UPS1YLR193C YJL193WP39542 402 aa2.26□□□□□ -2.05
UPS1YLR193C MNT3P40549 630 aa2.26□□□□□ -2.05
UPS1YLR193C NMD5P46970 1048 aa2.26□□□□□ -2.05
UPS1YLR193C YDL183CP48569 320 aa2.26□□□□□ -2.05
UPS1YLR193C RNR4P49723 345 aaKnown RBP2.26□□□□□ -2.05
UPS1YLR193C PEF1P53238 335 aa2.26□□□□□ -2.05
UPS1YLR193C RGT1P32862 1170 aa2.25□□□□□ -2.05
UPS1YLR193C YPT10P38146 199 aa2.25□□□□□ -2.05
UPS1YLR193C EHT1P38295 451 aa2.25□□□□□ -2.05
UPS1YLR193C JHD1P40034 492 aa2.25□□□□□ -2.05
UPS1YLR193C GPP2P40106 250 aaKnown RBP2.25□□□□□ -2.05
UPS1YLR193C PCI8P40512 444 aa2.25□□□□□ -2.05
UPS1YLR193C IRC8P47046 822 aa2.25□□□□□ -2.05
UPS1YLR193C SAP4P53036 818 aa2.25□□□□□ -2.05
UPS1YLR193C SQS1P53866 767 aaKnown RBP2.25□□□□□ -2.05
UPS1YLR193C SKY1Q03656 742 aa2.25□□□□□ -2.05
UPS1YLR193C NGL1Q08213 363 aaKnown RBP2.25□□□□□ -2.05
UPS1YLR193C AAC1P04710 309 aa2.24□□□□□ -2.05
UPS1YLR193C SEC12P11655 471 aa2.24□□□□□ -2.05
UPS1YLR193C CWH43P25618 953 aa2.24□□□□□ -2.05
UPS1YLR193C GSY2P27472 705 aa2.24□□□□□ -2.05
UPS1YLR193C HXT4P32467 576 aa2.24□□□□□ -2.05
UPS1YLR193C RMA1P36001 430 aaKnown RBP2.24□□□□□ -2.05
UPS1YLR193C EXO1P39875 702 aa2.24□□□□□ -2.05
UPS1YLR193C MEP2P41948 499 aa2.24□□□□□ -2.05
UPS1YLR193C TDA10P42938 290 aa2.24□□□□□ -2.05
UPS1YLR193C YFL015CP43578 164 aa2.24□□□□□ -2.05
UPS1YLR193C YNL058CP53947 316 aa2.24□□□□□ -2.05
UPS1YLR193C MRPL1Q04599 285 aa2.24□□□□□ -2.05
UPS1YLR193C GEP3Q08622 556 aa2.24□□□□□ -2.05
UPS1YLR193C CIR2Q08822 631 aa2.24□□□□□ -2.05
UPS1YLR193C RMP1Q12530 201 aa2.24□□□□□ -2.05
UPS1YLR193C VPS5Q92331 675 aa2.24□□□□□ -2.05
UPS1YLR193C AQY1P0CD91 305 aa2.23□□□□□ -2.05
UPS1YLR193C RNR3P21672 869 aaKnown RBP2.23□□□□□ -2.05
UPS1YLR193C YIL092WP40497 633 aa2.23□□□□□ -2.05
UPS1YLR193C IRC5P43610 853 aa2.23□□□□□ -2.05
UPS1YLR193C SCW4P53334 386 aaKnown RBP2.23□□□□□ -2.05
UPS1YLR193C IDP3P53982 420 aaKnown RBP2.23□□□□□ -2.05
UPS1YLR193C TDA9Q04545 1251 aa2.23□□□□□ -2.05
UPS1YLR193C SPN1Q06505 410 aaPredicted RBP2.23□□□□□ -2.05
UPS1YLR193C NEW1Q08972 1196 aaKnown RBP2.23□□□□□ -2.05
UPS1YLR193C YPR027CQ12079 277 aa2.23□□□□□ -2.05
UPS1YLR193C YEL076C-AP0CX16 216 aa2.22□□□□□ -2.05
UPS1YLR193C YLR464WP0CX17 216 aa2.22□□□□□ -2.05
UPS1YLR193C BET2P20133 325 aa2.22□□□□□ -2.05
UPS1YLR193C CBP3P21560 335 aa2.22□□□□□ -2.05
UPS1YLR193C ATP12P22135 325 aa2.22□□□□□ -2.05
UPS1YLR193C URE2P23202 354 aaKnown RBP2.22□□□□□ -2.05
UPS1YLR193C DSS4P32601 143 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms