RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W SIZ1Q04195 904 aa4.04□□□□□ -1.76
UBP12YJL197W CTI6Q08923 506 aa4.04□□□□□ -1.76
UBP12YJL197W ATG11Q12527 1178 aa4.04□□□□□ -1.76
UBP12YJL197W URA3P03962 267 aa4.04□□□□□ -1.76
UBP12YJL197W SWI4P25302 1093 aaKnown RBP4.04□□□□□ -1.76
UBP12YJL197W PIL1P53252 339 aaKnown RBP4.04□□□□□ -1.76
UBP12YJL197W ARP2P32381 391 aaKnown RBP4.04□□□□□ -1.76
UBP12YJL197W DPH2P32461 534 aa4.04□□□□□ -1.76
UBP12YJL197W RPD3P32561 433 aa4.04□□□□□ -1.76
UBP12YJL197W IST3P40565 148 aaPredicted RBP4.04□□□□□ -1.76
UBP12YJL197W SSY5P47002 699 aa4.04□□□□□ -1.76
UBP12YJL197W MTR3P48240 250 aaPredicted RBP4.04□□□□□ -1.76
UBP12YJL197W YOR111WQ99210 232 aa4.04□□□□□ -1.76
UBP12YJL197W RPB2P08518 1224 aaKnown RBP4.03□□□□□ -1.76
UBP12YJL197W ATG19P35193 415 aa4.03□□□□□ -1.76
UBP12YJL197W SEC28P40509 296 aaKnown RBP4.03□□□□□ -1.76
UBP12YJL197W CSL4P53859 292 aaPredicted RBP4.03□□□□□ -1.76
UBP12YJL197W YSA1Q01976 231 aa4.03□□□□□ -1.76
UBP12YJL197W YLR345WQ06137 509 aa4.03□□□□□ -1.76
UBP12YJL197W CDA1Q06702 301 aa4.03□□□□□ -1.76
UBP12YJL197W GPR1Q12361 961 aa4.03□□□□□ -1.76
UBP12YJL197W TUF1P02992 437 aaKnown RBP4.03□□□□□ -1.76
UBP12YJL197W ADK2P26364 225 aa4.03□□□□□ -1.76
UBP12YJL197W MRP20P32387 263 aa4.03□□□□□ -1.76
UBP12YJL197W PXA1P41909 870 aa4.03□□□□□ -1.76
UBP12YJL197W GSM1P42950 618 aa4.03□□□□□ -1.76
UBP12YJL197W SQS1P53866 767 aaKnown RBP4.03□□□□□ -1.76
UBP12YJL197W ATG21Q02887 496 aa4.03□□□□□ -1.76
UBP12YJL197W VTI1Q04338 217 aa4.03□□□□□ -1.76
UBP12YJL197W PYC1P11154 1178 aaKnown RBP4.03□□□□□ -1.76
UBP12YJL197W FRS1P15624 595 aaKnown RBP4.03□□□□□ -1.76
UBP12YJL197W PRE8P23639 250 aa4.03□□□□□ -1.76
UBP12YJL197W YPT7P32939 208 aa4.03□□□□□ -1.76
UBP12YJL197W YHR033WP38690 423 aa4.03□□□□□ -1.76
UBP12YJL197W MRX6P48564 524 aa4.03□□□□□ -1.76
UBP12YJL197W VPS4P52917 437 aa4.03□□□□□ -1.76
UBP12YJL197W PEX25Q02969 394 aa4.03□□□□□ -1.76
UBP12YJL197W YLR302CO13544 120 aa4.02□□□□□ -1.77
UBP12YJL197W GPM1P00950 247 aaKnown RBP4.02□□□□□ -1.77
UBP12YJL197W KIN2P13186 1147 aaKnown RBP4.02□□□□□ -1.77
UBP12YJL197W STE50P25344 346 aa4.02□□□□□ -1.77
UBP12YJL197W MTC7P32633 139 aa4.02□□□□□ -1.77
UBP12YJL197W GDI1P39958 451 aaKnown RBP4.02□□□□□ -1.77
UBP12YJL197W BUD8P41698 603 aa4.02□□□□□ -1.77
UBP12YJL197W SAE2P46946 345 aa4.02□□□□□ -1.77
UBP12YJL197W TAH11P47112 604 aa4.02□□□□□ -1.77
UBP12YJL197W PCD1Q12524 340 aa4.02□□□□□ -1.77
UBP12YJL197W RAS1P01119 309 aa4.02□□□□□ -1.77
UBP12YJL197W TUB2P02557 457 aaKnown RBP4.02□□□□□ -1.77
UBP12YJL197W HMG2P12684 1045 aa4.02□□□□□ -1.77
UBP12YJL197W CMP2P14747 604 aa4.02□□□□□ -1.77
UBP12YJL197W YBL029WP38201 376 aa4.02□□□□□ -1.77
UBP12YJL197W RFC5P38251 354 aa4.02□□□□□ -1.77
UBP12YJL197W YHR078WP38799 552 aa4.02□□□□□ -1.77
UBP12YJL197W SDP1P40479 209 aa4.02□□□□□ -1.77
UBP12YJL197W BUD27P43573 796 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
UBP12YJL197W REC102Q02721 264 aa4.02□□□□□ -1.77
UBP12YJL197W MSC2Q03455 724 aa4.02□□□□□ -1.77
UBP12YJL197W MCM21Q06675 368 aa4.02□□□□□ -1.77
UBP12YJL197W GRX6Q12438 231 aa4.02□□□□□ -1.77
UBP12YJL197W CPA2P03965 1118 aaKnown RBP4.02□□□□□ -1.77
UBP12YJL197W SRP101P32916 621 aa4.02□□□□□ -1.77
UBP12YJL197W ECM1P39715 212 aa4.02□□□□□ -1.77
UBP12YJL197W AAD10P47182 288 aa4.02□□□□□ -1.77
UBP12YJL197W PSP2P50109 593 aaKnown RBP4.02□□□□□ -1.77
UBP12YJL197W YBP2P53169 641 aa4.02□□□□□ -1.77
UBP12YJL197W YGR012WP53206 393 aa4.02□□□□□ -1.77
UBP12YJL197W OGG1P53397 376 aaPredicted RBP4.02□□□□□ -1.77
UBP12YJL197W SPO1P53541 631 aa4.02□□□□□ -1.77
UBP12YJL197W HMO1Q03973 246 aaKnown RBP4.02□□□□□ -1.77
UBP12YJL197W VBA4Q04602 768 aaKnown RBP4.02□□□□□ -1.77
UBP12YJL197W ADY4Q05955 493 aa4.02□□□□□ -1.77
UBP12YJL197W COX17Q12287 69 aa4.02□□□□□ -1.77
UBP12YJL197W SKS1Q12505 502 aa4.02□□□□□ -1.77
UBP12YJL197W PAR32Q12515 295 aaKnown RBP4.02□□□□□ -1.77
UBP12YJL197W YCK2P23292 546 aaKnown RBP4.01□□□□□ -1.77
UBP12YJL197W UIP5P36137 443 aa4.01□□□□□ -1.77
UBP12YJL197W CDS1P38221 457 aa4.01□□□□□ -1.77
UBP12YJL197W YNR061CP53747 219 aa4.01□□□□□ -1.77
UBP12YJL197W ACS1Q01574 713 aa4.01□□□□□ -1.77
UBP12YJL197W VPS64Q03944 604 aa4.01□□□□□ -1.77
UBP12YJL197W SSL1Q04673 461 aaPredicted RBP4.01□□□□□ -1.77
UBP12YJL197W ARP9Q05123 467 aa4.01□□□□□ -1.77
UBP12YJL197W VAM6Q07468 1049 aa4.01□□□□□ -1.77
UBP12YJL197W TY1A-NL1Q12391 440 aaKnown RBP4.01□□□□□ -1.77
UBP12YJL197W ARG1P22768 420 aa4.01□□□□□ -1.77
UBP12YJL197W ROK1P45818 564 aaPredicted RBP4.01□□□□□ -1.77
UBP12YJL197W POL31P46957 487 aa4.01□□□□□ -1.77
UBP12YJL197W YVC1Q12324 675 aa4.01□□□□□ -1.77
UBP12YJL197W PDH1Q12428 516 aaKnown RBP4.01□□□□□ -1.77
UBP12YJL197W MNE1P24720 663 aa4.01□□□□□ -1.77
UBP12YJL197W TRK2P28584 889 aa4.01□□□□□ -1.77
UBP12YJL197W LTP1P40347 161 aa4.01□□□□□ -1.77
UBP12YJL197W ARG5,6Q01217 863 aa4.01□□□□□ -1.77
UBP12YJL197W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
UBP12YJL197W RCR2Q03446 210 aaKnown RBP4.01□□□□□ -1.77
UBP12YJL197W ECM22Q05958 814 aaPredicted RBP4.01□□□□□ -1.77
UBP12YJL197W TGL5Q12043 749 aa4.01□□□□□ -1.77
UBP12YJL197W UPC2Q12151 913 aa4.01□□□□□ -1.77
UBP12YJL197W STF1P01098 86 aa4□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms