RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeast

Gene PXR1, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXR1	YGR280C	CDC9	P04819	755 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	SBP1	P10080	294 aa	Known RBP	4.6	□□□□□ -1.67
PXR1	YGR280C	MNN4	P36044	1178 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	PGM2	P37012	569 aa	Known RBP	4.6	□□□□□ -1.67
PXR1	YGR280C	ECM13	P38195	257 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	FHL1	P39521	936 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	GEM1	P39722	662 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	ATG3	P40344	310 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	LYS5	P50113	272 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	YGL140C	P53120	1219 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	CUE3	P53137	624 aa	Known RBP	4.6	□□□□□ -1.67
PXR1	YGR280C	SDA1	P53313	767 aa	Known RBP	4.6	□□□□□ -1.67
PXR1	YGR280C	DFG5	Q05031	458 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	FUS2	Q05670	677 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	YPR027C	Q12079	277 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	Q0182	Q9ZZW1	134 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	DYN1	P36022	4092 aa		4.6	□□□□□ -1.67
PXR1	YGR280C	VAS1	P07806	1104 aa	Known RBP	4.59	□□□□□ -1.67
PXR1	YGR280C	CHS1	P08004	1131 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	RED1	P14291	827 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	LRE1	P25579	583 aa	Known RBP	4.59	□□□□□ -1.67
PXR1	YGR280C	CAP1	P28495	268 aa	Known RBP	4.59	□□□□□ -1.67
PXR1	YGR280C	SEF1	P34228	1148 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	BMH2	P34730	273 aa	Known RBP	4.59	□□□□□ -1.67
PXR1	YGR280C	STT3	P39007	718 aa	Known RBP	4.59	□□□□□ -1.67
PXR1	YGR280C	CDC1	P40986	491 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	ROG3	P43602	733 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	IKS1	P47042	667 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	HLJ1	P48353	224 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	HSH155	P49955	971 aa	Known RBP	4.59	□□□□□ -1.67
PXR1	YGR280C	CBK1	P53894	756 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	VID22	Q05934	901 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	DDC1	Q08949	612 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	CEX1	Q12453	761 aa		4.59	□□□□□ -1.67
PXR1	YGR280C	SUC2	P00724	532 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	FBP26	P32604	452 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	YKL151C	P36059	337 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	TAE1	P38340	232 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	EXO1	P39875	702 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	CFD1	P40558	293 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	AAD14	P42884	376 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	ASG7	P46993	209 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	SET2	P46995	733 aa	Known RBP	4.58	□□□□□ -1.68
PXR1	YGR280C	YJR054W	P47114	497 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	YRB30	P53107	440 aa	Predicted RBP	4.58	□□□□□ -1.68
PXR1	YGR280C	PIR3	Q03180	325 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	SIZ1	Q04195	904 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	NDD1	Q08887	554 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	RRP6	Q12149	733 aa	Known RBP	4.58	□□□□□ -1.68
PXR1	YGR280C	YOL098C	Q12496	1037 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	TRS33	Q99394	268 aa		4.58	□□□□□ -1.68
PXR1	YGR280C	PYC1	P11154	1178 aa	Known RBP	4.57	□□□□□ -1.68
PXR1	YGR280C	EFB1	P32471	206 aa	Known RBP	4.57	□□□□□ -1.68
PXR1	YGR280C	NPP2	P39997	493 aa		4.57	□□□□□ -1.68
PXR1	YGR280C	EPL1	P43572	832 aa		4.57	□□□□□ -1.68
PXR1	YGR280C	SMC3	P47037	1230 aa		4.57	□□□□□ -1.68
PXR1	YGR280C	SRP1	Q02821	542 aa	Known RBP	4.57	□□□□□ -1.68
PXR1	YGR280C	TY1A-MR1	Q04215	440 aa		4.57	□□□□□ -1.68
PXR1	YGR280C	RPC11	Q04307	110 aa	Predicted RBP	4.57	□□□□□ -1.68
PXR1	YGR280C	ECM38	Q05902	660 aa	Predicted RBP	4.57	□□□□□ -1.68
PXR1	YGR280C	ESC2	Q06340	456 aa		4.57	□□□□□ -1.68
PXR1	YGR280C	BDS1	Q08347	646 aa		4.57	□□□□□ -1.68
PXR1	YGR280C	SRO7	Q12038	1033 aa		4.57	□□□□□ -1.68
PXR1	YGR280C	RPL7A	P05737	244 aa	Known RBP	4.56	□□□□□ -1.68
PXR1	YGR280C	CYT1	P07143	309 aa		4.56	□□□□□ -1.68
PXR1	YGR280C	LAM1	P38851	1228 aa		4.56	□□□□□ -1.68
PXR1	YGR280C	KAP123	P40069	1113 aa	Known RBP	4.56	□□□□□ -1.68
PXR1	YGR280C	YJR079W	P47126	109 aa		4.56	□□□□□ -1.68
PXR1	YGR280C	YJR098C	P47139	656 aa		4.56	□□□□□ -1.68
PXR1	YGR280C	COG7	P53195	279 aa		4.56	□□□□□ -1.68
PXR1	YGR280C	ARP4	P80428	489 aa		4.56	□□□□□ -1.68
PXR1	YGR280C	NUP116	Q02630	1113 aa		4.56	□□□□□ -1.68
PXR1	YGR280C	BSC6	Q08280	497 aa		4.56	□□□□□ -1.68
PXR1	YGR280C	PER33	Q12144	273 aa		4.56	□□□□□ -1.68
PXR1	YGR280C	RPL7B	Q12213	244 aa	Known RBP	4.56	□□□□□ -1.68
PXR1	YGR280C	MVD1	P32377	396 aa	Known RBP	4.55	□□□□□ -1.68
PXR1	YGR280C	UTR2	P32623	467 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	OSH7	P38755	437 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	ALK1	P43633	760 aa	Known RBP	4.55	□□□□□ -1.68
PXR1	YGR280C	YJR030C	P47101	745 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	PRP24	P49960	444 aa	Known RBP	4.55	□□□□□ -1.68
PXR1	YGR280C	GUP1	P53154	560 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	ISU1	Q03020	165 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	MZM1	Q03429	123 aa	Predicted RBP	4.55	□□□□□ -1.68
PXR1	YGR280C	CEF1	Q03654	590 aa	Predicted RBP	4.55	□□□□□ -1.68
PXR1	YGR280C	TRS23	Q03784	219 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	YMR018W	Q04364	514 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	HRD3	Q05787	833 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	UTP13	Q05946	817 aa	Known RBP	4.55	□□□□□ -1.68
PXR1	YGR280C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
PXR1	YGR280C	TIP41	Q12199	356 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	SVS1	Q12254	260 aa		4.55	□□□□□ -1.68
PXR1	YGR280C	CCP1	P00431	361 aa		4.54	□□□□□ -1.68
PXR1	YGR280C	GAL10	P04397	699 aa		4.54	□□□□□ -1.68
PXR1	YGR280C	NAT1	P12945	854 aa	Known RBP	4.54	□□□□□ -1.68
PXR1	YGR280C	DAT1	P13483	248 aa	Known RBP	4.54	□□□□□ -1.68
PXR1	YGR280C	ATG15	P25641	520 aa		4.54	□□□□□ -1.68
PXR1	YGR280C	CBF2	P32504	956 aa		4.54	□□□□□ -1.68
PXR1	YGR280C	MUD1	P32605	298 aa	Known RBP	4.54	□□□□□ -1.68
PXR1	YGR280C	PEP12	P32854	288 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 91.2 ms