RNA–Protein interactions for RNA: YGR048W

UFD1, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene UFD1, Length 1,086 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UFD1YGR048W AKR1P39010 764 aa8.27□□□□□ -1.09
UFD1YGR048W UTP18P40362 594 aaPredicted RBP8.27□□□□□ -1.09
UFD1YGR048W APS3P47064 194 aa8.27□□□□□ -1.09
UFD1YGR048W RMR1P53060 241 aa8.27□□□□□ -1.09
UFD1YGR048W ZIP2P53061 704 aa8.27□□□□□ -1.09
UFD1YGR048W TPO2P53283 614 aa8.27□□□□□ -1.09
UFD1YGR048W FYV6P53913 173 aa8.27□□□□□ -1.09
UFD1YGR048W PRO2P54885 456 aaKnown RBP8.27□□□□□ -1.09
UFD1YGR048W RPL22BP56628 122 aaKnown RBP8.27□□□□□ -1.09
UFD1YGR048W CEG1Q01159 459 aaPredicted RBP8.27□□□□□ -1.09
UFD1YGR048W UTP6Q02354 440 aaKnown RBP8.27□□□□□ -1.09
UFD1YGR048W NOG1Q02892 647 aaKnown RBP8.27□□□□□ -1.09
UFD1YGR048W TAF12Q03761 539 aa8.27□□□□□ -1.09
UFD1YGR048W BUD22Q04347 519 aaKnown RBP8.27□□□□□ -1.09
UFD1YGR048W EMI2Q04409 500 aaKnown RBP8.27□□□□□ -1.09
UFD1YGR048W RRN11Q04712 507 aa8.27□□□□□ -1.09
UFD1YGR048W GLO2Q05584 274 aa8.27□□□□□ -1.09
UFD1YGR048W PSR2Q07949 397 aa8.27□□□□□ -1.09
UFD1YGR048W AVO1Q08236 1176 aa8.27□□□□□ -1.09
UFD1YGR048W TMA46Q12000 345 aaKnown RBP8.27□□□□□ -1.09
UFD1YGR048W SSF2Q12153 453 aaPredicted RBP8.27□□□□□ -1.09
UFD1YGR048W HIS4P00815 799 aaKnown RBP8.26□□□□□ -1.09
UFD1YGR048W MF(ALPHA)1P01149 165 aa8.26□□□□□ -1.09
UFD1YGR048W GPA2P10823 449 aa8.26□□□□□ -1.09
UFD1YGR048W HMG2P12684 1045 aa8.26□□□□□ -1.09
UFD1YGR048W DBP5P20449 482 aaKnown RBP8.26□□□□□ -1.09
UFD1YGR048W GUT2P32191 649 aa8.26□□□□□ -1.09
UFD1YGR048W BIO2P32451 375 aa8.26□□□□□ -1.09
UFD1YGR048W PRP19P32523 503 aaKnown RBP8.26□□□□□ -1.09
UFD1YGR048W UIP5P36137 443 aa8.26□□□□□ -1.09
UFD1YGR048W YBR225WP38321 900 aa8.26□□□□□ -1.09
UFD1YGR048W SWC5P38326 303 aa8.26□□□□□ -1.09
UFD1YGR048W DIA4P38705 446 aaPredicted RBP8.26□□□□□ -1.09
UFD1YGR048W EMC2P47133 292 aaKnown RBP8.26□□□□□ -1.09
UFD1YGR048W RIM8P53179 542 aa8.26□□□□□ -1.09
UFD1YGR048W RTC4P53850 401 aa8.26□□□□□ -1.09
UFD1YGR048W SED5Q01590 340 aa8.26□□□□□ -1.09
UFD1YGR048W MEH1Q02205 184 aa8.26□□□□□ -1.09
UFD1YGR048W YMR187CQ03236 431 aa8.26□□□□□ -1.09
UFD1YGR048W CLU1Q03690 1277 aaKnown RBP8.26□□□□□ -1.09
UFD1YGR048W EST2Q06163 884 aa8.26□□□□□ -1.09
UFD1YGR048W TOS4Q06266 489 aa8.26□□□□□ -1.09
UFD1YGR048W SPO75Q07798 868 aa8.26□□□□□ -1.09
UFD1YGR048W YOL075CQ08234 1294 aa8.26□□□□□ -1.09
UFD1YGR048W PUS7Q08647 676 aaKnown RBP8.26□□□□□ -1.09
UFD1YGR048W CLP1Q08685 445 aaPredicted RBP8.26□□□□□ -1.09
UFD1YGR048W VPS54Q12071 889 aa8.26□□□□□ -1.09
UFD1YGR048W NBL1Q3E7Y6 73 aa8.26□□□□□ -1.09
UFD1YGR048W TY4B-HP0C2J7 1802 aa8.25□□□□□ -1.09
UFD1YGR048W TY4B-JP47024 1803 aa8.25□□□□□ -1.09
UFD1YGR048W RPS3P05750 240 aaKnown RBP8.25□□□□□ -1.09
UFD1YGR048W HSF1P10961 833 aa8.25□□□□□ -1.09
UFD1YGR048W DAP2P18962 818 aa8.25□□□□□ -1.09
UFD1YGR048W URE2P23202 354 aaKnown RBP8.25□□□□□ -1.09
UFD1YGR048W ZIP1P31111 875 aa8.25□□□□□ -1.09
UFD1YGR048W ACP1P32463 125 aa8.25□□□□□ -1.09
UFD1YGR048W MKS1P34072 584 aa8.25□□□□□ -1.09
UFD1YGR048W CLG1P35190 452 aa8.25□□□□□ -1.09
UFD1YGR048W TSC10P38342 320 aa8.25□□□□□ -1.09
UFD1YGR048W GOS1P38736 223 aa8.25□□□□□ -1.09
UFD1YGR048W YHL008CP38750 627 aa8.25□□□□□ -1.09
UFD1YGR048W MTG2P38860 518 aa8.25□□□□□ -1.09
UFD1YGR048W CRG1P38892 291 aaRIP-Chip data8.25□□□□□ -1.09not detected
UFD1YGR048W SWD1P39706 426 aa8.25□□□□□ -1.09
UFD1YGR048W GDH3P39708 457 aa8.25□□□□□ -1.09
UFD1YGR048W MNN11P46985 422 aaKnown RBP8.25□□□□□ -1.09
UFD1YGR048W LIF1P53150 421 aa8.25□□□□□ -1.09
UFD1YGR048W NMA2P53204 395 aa8.25□□□□□ -1.09
UFD1YGR048W IMP4P53941 290 aaKnown RBP8.25□□□□□ -1.09
UFD1YGR048W ORC3P54790 616 aa8.25□□□□□ -1.09
UFD1YGR048W TDA9Q04545 1251 aa8.25□□□□□ -1.09
UFD1YGR048W SVF1Q05515 481 aa8.25□□□□□ -1.09
UFD1YGR048W VPS36Q06696 566 aa8.25□□□□□ -1.09
UFD1YGR048W SNX3Q08826 162 aaKnown RBP8.25□□□□□ -1.09
UFD1YGR048W RCN2Q12044 265 aa8.25□□□□□ -1.09
UFD1YGR048W YDL109CQ12103 647 aa8.25□□□□□ -1.09
UFD1YGR048W NTO1Q12311 748 aa8.25□□□□□ -1.09
UFD1YGR048W HSP42Q12329 375 aa8.25□□□□□ -1.09
UFD1YGR048W APM4Q99186 491 aa8.25□□□□□ -1.09
UFD1YGR048W SEC18P18759 758 aaKnown RBP8.24□□□□□ -1.09
UFD1YGR048W KIN3P22209 435 aa8.24□□□□□ -1.09
UFD1YGR048W CRM1P30822 1084 aaKnown RBP8.24□□□□□ -1.09
UFD1YGR048W TFC4P33339 1025 aa8.24□□□□□ -1.09
UFD1YGR048W TRM2P33753 639 aa8.24□□□□□ -1.09
UFD1YGR048W SET3P36124 751 aa8.24□□□□□ -1.09
UFD1YGR048W KAP104P38217 918 aaKnown RBP8.24□□□□□ -1.09
UFD1YGR048W YBR138CP38277 524 aa8.24□□□□□ -1.09
UFD1YGR048W MMS21P38632 267 aa8.24□□□□□ -1.09
UFD1YGR048W DYS1P38791 387 aa8.24□□□□□ -1.09
UFD1YGR048W TRM5P38793 499 aa8.24□□□□□ -1.09
UFD1YGR048W SAH1P39954 449 aaKnown RBP8.24□□□□□ -1.09
UFD1YGR048W MAM33P40513 266 aa8.24□□□□□ -1.09
UFD1YGR048W DAK2P43550 591 aa8.24□□□□□ -1.09
UFD1YGR048W ATG36P46983 293 aa8.24□□□□□ -1.09
UFD1YGR048W YGR021WP53212 290 aa8.24□□□□□ -1.09
UFD1YGR048W DFG5Q05031 458 aa8.24□□□□□ -1.09
UFD1YGR048W BCP1Q06338 283 aa8.24□□□□□ -1.09
UFD1YGR048W DXO1Q06349 442 aa8.24□□□□□ -1.09
UFD1YGR048W IPP1P00817 287 aaKnown RBP8.23□□□□□ -1.09
UFD1YGR048W TEF1P02994 458 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 69.6 ms