RNA–Protein interactions for RNA: YER038C

KRE29, Transcript of Subunit of the SMC5-SMC6 complex, yeast

Gene KRE29, Length 1,395 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
KRE29	YER038C	VPS1	P21576	704 aa	Known RBP	4.56	□□□□□ -1.68
KRE29	YER038C	RFA1	P22336	621 aa	Known RBP	4.56	□□□□□ -1.68
KRE29	YER038C	TVP23	P38962	199 aa		4.56	□□□□□ -1.68
KRE29	YER038C	ERP2	P39704	215 aa		4.56	□□□□□ -1.68
KRE29	YER038C	VAC8	P39968	578 aa		4.56	□□□□□ -1.68
KRE29	YER038C	YEL025C	P39991	1188 aa		4.56	□□□□□ -1.68
KRE29	YER038C	ALD5	P40047	520 aa	Known RBP	4.56	□□□□□ -1.68
KRE29	YER038C	RET3	P53600	189 aa		4.56	□□□□□ -1.68
KRE29	YER038C	BNI5	P53890	448 aa	Known RBP	4.56	□□□□□ -1.68
KRE29	YER038C	AIM33	Q04516	312 aa		4.56	□□□□□ -1.68
KRE29	YER038C	YLR407W	Q06070	228 aa		4.56	□□□□□ -1.68
KRE29	YER038C	YSH1	Q06224	779 aa	Predicted RBP	4.56	□□□□□ -1.68
KRE29	YER038C	CRD1	Q07560	283 aa		4.56	□□□□□ -1.68
KRE29	YER038C	ACF2	Q12168	779 aa		4.56	□□□□□ -1.68
KRE29	YER038C	PGK1	P00560	416 aa	Known RBP	4.55	□□□□□ -1.68
KRE29	YER038C	HSC82	P15108	705 aa	Known RBP	4.55	□□□□□ -1.68
KRE29	YER038C	NPP1	P25353	742 aa		4.55	□□□□□ -1.68
KRE29	YER038C	RAD51	P25454	400 aa		4.55	□□□□□ -1.68
KRE29	YER038C	RME1	P32338	300 aa	Known RBP	4.55	□□□□□ -1.68
KRE29	YER038C	SAS3	P34218	831 aa		4.55	□□□□□ -1.68
KRE29	YER038C	YRO2	P38079	344 aa		4.55	□□□□□ -1.68
KRE29	YER038C	GAA1	P39012	614 aa		4.55	□□□□□ -1.68
KRE29	YER038C	JHD1	P40034	492 aa		4.55	□□□□□ -1.68
KRE29	YER038C	SEC9	P40357	651 aa		4.55	□□□□□ -1.68
KRE29	YER038C	GPD2	P41911	440 aa	Known RBP	4.55	□□□□□ -1.68
KRE29	YER038C	MDR1	P53258	950 aa		4.55	□□□□□ -1.68
KRE29	YER038C	ZPR1	P53303	486 aa	Known RBP	4.55	□□□□□ -1.68
KRE29	YER038C	CNM67	P53865	581 aa	Known RBP	4.55	□□□□□ -1.68
KRE29	YER038C	CSM3	Q04659	317 aa		4.55	□□□□□ -1.68
KRE29	YER038C	PHM6	Q05637	104 aa		4.55	□□□□□ -1.68
KRE29	YER038C	OMS1	Q06668	471 aa		4.55	□□□□□ -1.68
KRE29	YER038C	ILV1	P00927	576 aa	Known RBP	4.54	□□□□□ -1.68
KRE29	YER038C	RNR2	P09938	399 aa	Known RBP	4.54	□□□□□ -1.68
KRE29	YER038C	CBP3	P21560	335 aa		4.54	□□□□□ -1.68
KRE29	YER038C	UBC1	P21734	215 aa	Known RBP	4.54	□□□□□ -1.68
KRE29	YER038C	SPC110	P32380	944 aa		4.54	□□□□□ -1.68
KRE29	YER038C	TOM20	P35180	183 aa		4.54	□□□□□ -1.68
KRE29	YER038C	YBR238C	P38330	731 aa	Known RBP	4.54	□□□□□ -1.68
KRE29	YER038C	OCA5	P38738	679 aa		4.54	□□□□□ -1.68
KRE29	YER038C	YHL017W	P38745	532 aa		4.54	□□□□□ -1.68
KRE29	YER038C	IRR1	P40541	1150 aa		4.54	□□□□□ -1.68
KRE29	YER038C	DJP1	P40564	432 aa		4.54	□□□□□ -1.68
KRE29	YER038C	SAD1	P43589	448 aa		4.54	□□□□□ -1.68
KRE29	YER038C	RSC8	P43609	557 aa	Known RBP	4.54	□□□□□ -1.68
KRE29	YER038C	CTF18	P49956	741 aa		4.54	□□□□□ -1.68
KRE29	YER038C	DIP5	P53388	608 aa		4.54	□□□□□ -1.68
KRE29	YER038C	YMR206W	Q03695	313 aa		4.54	□□□□□ -1.68
KRE29	YER038C	PEX19	Q07418	342 aa		4.54	□□□□□ -1.68
KRE29	YER038C	YDL121C	Q07541	149 aa		4.54	□□□□□ -1.68
KRE29	YER038C	CEX1	Q12453	761 aa		4.54	□□□□□ -1.68
KRE29	YER038C	YDR034W-B	Q6Q5X2	51 aa		4.54	□□□□□ -1.68
KRE29	YER038C	SWI6	P09959	803 aa		4.53	□□□□□ -1.68
KRE29	YER038C	THR4	P16120	514 aa	Known RBP	4.53	□□□□□ -1.68
KRE29	YER038C	GSY1	P23337	708 aa		4.53	□□□□□ -1.68
KRE29	YER038C	FUB1	P25659	250 aa		4.53	□□□□□ -1.68
KRE29	YER038C	MSS51	P32335	436 aa		4.53	□□□□□ -1.68
KRE29	YER038C	STE14	P32584	239 aa		4.53	□□□□□ -1.68
KRE29	YER038C	AFR1	P33304	620 aa		4.53	□□□□□ -1.68
KRE29	YER038C	STE13	P33894	931 aa		4.53	□□□□□ -1.68
KRE29	YER038C	SIT1	P39980	628 aa		4.53	□□□□□ -1.68
KRE29	YER038C	SPF1	P39986	1215 aa	Known RBP	4.53	□□□□□ -1.68
KRE29	YER038C	BUD6	P41697	788 aa		4.53	□□□□□ -1.68
KRE29	YER038C	CCM1	P48237	864 aa	Predicted RBP	4.53	□□□□□ -1.68
KRE29	YER038C	MFM1	Q02783	413 aa		4.53	□□□□□ -1.68
KRE29	YER038C	HEL2	Q05580	639 aa	Known RBP	4.53	□□□□□ -1.68
KRE29	YER038C	ETT1	Q08421	412 aa	Known RBP	4.53	□□□□□ -1.68
KRE29	YER038C	SLK19	Q08581	821 aa	Known RBP	4.53	□□□□□ -1.68
KRE29	YER038C	CLN3	P13365	580 aa		4.53	□□□□□ -1.69
KRE29	YER038C	STE5	P32917	917 aa		4.53	□□□□□ -1.69
KRE29	YER038C	DID4	P36108	232 aa		4.53	□□□□□ -1.69
KRE29	YER038C	STT3	P39007	718 aa	Known RBP	4.53	□□□□□ -1.69
KRE29	YER038C	FIS1	P40515	155 aa		4.53	□□□□□ -1.69
KRE29	YER038C	BUL1	P48524	976 aa		4.53	□□□□□ -1.69
KRE29	YER038C	STB4	P50104	949 aa		4.53	□□□□□ -1.69
KRE29	YER038C	RCF1	Q03713	159 aa		4.53	□□□□□ -1.69
KRE29	YER038C	APL5	Q08951	932 aa	Known RBP	4.53	□□□□□ -1.69
KRE29	YER038C	DCS2	Q12123	353 aa		4.53	□□□□□ -1.69
KRE29	YER038C	GET3	Q12154	354 aa	Known RBP	4.53	□□□□□ -1.69
KRE29	YER038C	SWM1	Q12379	170 aa		4.53	□□□□□ -1.69
KRE29	YER038C	YMR084W	A2P2R3	262 aa		4.52	□□□□□ -1.69
KRE29	YER038C	MET3	P08536	511 aa		4.52	□□□□□ -1.69
KRE29	YER038C	PRP9	P19736	530 aa	Known RBP	4.52	□□□□□ -1.69
KRE29	YER038C	RIX1	P38883	763 aa	Predicted RBP	4.52	□□□□□ -1.69
KRE29	YER038C	YIL108W	P40483	696 aa	Known RBP	4.52	□□□□□ -1.69
KRE29	YER038C	SSL1	Q04673	461 aa	Predicted RBP	4.52	□□□□□ -1.69
KRE29	YER038C	COQ9	Q05779	260 aa		4.52	□□□□□ -1.69
KRE29	YER038C	TDA5	Q06417	326 aa	Known RBP	4.52	□□□□□ -1.69
KRE29	YER038C	TIP41	Q12199	356 aa		4.52	□□□□□ -1.69
KRE29	YER038C	PPR1	P07272	904 aa	Predicted RBP	4.51	□□□□□ -1.69
KRE29	YER038C	ALG7	P07286	448 aa		4.51	□□□□□ -1.69
KRE29	YER038C	SRD1	P09007	221 aa		4.51	□□□□□ -1.69
KRE29	YER038C	RPL19A	P0CX82	189 aa	Known RBP	4.51	□□□□□ -1.69
KRE29	YER038C	RPL19B	P0CX83	189 aa	Predicted RBP	4.51	□□□□□ -1.69
KRE29	YER038C	PRP22	P24384	1145 aa	Known RBP	4.51	□□□□□ -1.69
KRE29	YER038C	DRE2	P36152	348 aa		4.51	□□□□□ -1.69
KRE29	YER038C	YBR184W	P38299	523 aa		4.51	□□□□□ -1.69
KRE29	YER038C	EAF5	P39995	279 aa		4.51	□□□□□ -1.69
KRE29	YER038C	ULP2	P40537	1034 aa	Predicted RBP	4.51	□□□□□ -1.69
KRE29	YER038C	SDA1	P53313	767 aa	Known RBP	4.51	□□□□□ -1.69
KRE29	YER038C	PGA2	P53903	129 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms