RNA–Protein interactions for RNA: YDR443C

SSN2, Transcript of Subunit of the RNA polymerase II mediator complex, yeastyeast

Gene SSN2, Length 4,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN2YDR443C SFI1Q12369 946 aa2.8□□□□□ -1.96
SSN2YDR443C NSI1Q12457 570 aa2.8□□□□□ -1.96
SSN2YDR443C YRF1-2P40105 1681 aa2.8□□□□□ -1.96
SSN2YDR443C GCN4P03069 281 aa2.8□□□□□ -1.96
SSN2YDR443C GAL7P08431 366 aa2.8□□□□□ -1.96
SSN2YDR443C PUT4P15380 627 aa2.8□□□□□ -1.96
SSN2YDR443C EFT1P32324 842 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C ARC19P33204 171 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C YUH1P35127 236 aa2.8□□□□□ -1.96
SSN2YDR443C TEF4P36008 412 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C YKL077WP36081 392 aa2.8□□□□□ -1.96
SSN2YDR443C YBR138CP38277 524 aa2.8□□□□□ -1.96
SSN2YDR443C YTA6P40328 754 aa2.8□□□□□ -1.96
SSN2YDR443C GCV2P49095 1034 aa2.8□□□□□ -1.96
SSN2YDR443C REX2P54964 269 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C PNG1Q02890 363 aa2.8□□□□□ -1.96
SSN2YDR443C SMD2Q06217 110 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C DBP9Q06218 594 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C FMP45Q07651 309 aa2.8□□□□□ -1.96
SSN2YDR443C HFI1Q12060 488 aa2.8□□□□□ -1.96
SSN2YDR443C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SSN2YDR443C PFK27Q12471 397 aaPredicted RBP2.8□□□□□ -1.96
SSN2YDR443C BET2P20133 325 aa2.8□□□□□ -1.96
SSN2YDR443C OLE1P21147 510 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C PRP28P23394 588 aa2.8□□□□□ -1.96
SSN2YDR443C SRO77P38163 1010 aa2.8□□□□□ -1.96
SSN2YDR443C AIM10P39965 576 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C DLD3P39976 496 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C ARB1P40024 610 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C DOT5P40553 215 aa2.8□□□□□ -1.96
SSN2YDR443C LAM5P43560 674 aa2.8□□□□□ -1.96
SSN2YDR443C TOF1P53840 1238 aa2.8□□□□□ -1.96
SSN2YDR443C ERV25P54837 211 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C CSR1Q06705 408 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SSN2YDR443C NGL1Q08213 363 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C YOR296WQ08748 1289 aa2.8□□□□□ -1.96
SSN2YDR443C CIR2Q08822 631 aa2.8□□□□□ -1.96
SSN2YDR443C RUD3Q12234 484 aaKnown RBP2.8□□□□□ -1.96
SSN2YDR443C MTF2P10849 440 aa2.79□□□□□ -1.96
SSN2YDR443C KAR3P17119 729 aa2.79□□□□□ -1.96
SSN2YDR443C NIP1P32497 812 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C GYP6P32806 458 aa2.79□□□□□ -1.96
SSN2YDR443C MRP4P32902 394 aa2.79□□□□□ -1.96
SSN2YDR443C SRP101P32916 621 aa2.79□□□□□ -1.96
SSN2YDR443C SUR1P33300 382 aa2.79□□□□□ -1.96
SSN2YDR443C SDS22P36047 338 aa2.79□□□□□ -1.96
SSN2YDR443C BSC5P53755 489 aa2.79□□□□□ -1.96
SSN2YDR443C JJJ1P53863 590 aa2.79□□□□□ -1.96
SSN2YDR443C EOS1P53938 366 aa2.79□□□□□ -1.96
SSN2YDR443C NOG1Q02892 647 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C YOR111WQ99210 232 aa2.79□□□□□ -1.96
SSN2YDR443C SEC53P07283 254 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C YCL002CP25565 263 aa2.79□□□□□ -1.96
SSN2YDR443C ERV1P27882 189 aa2.79□□□□□ -1.96
SSN2YDR443C SWD1P39706 426 aa2.79□□□□□ -1.96
SSN2YDR443C MPH1P40562 993 aa2.79□□□□□ -1.96
SSN2YDR443C SLS1P42900 643 aa2.79□□□□□ -1.96
SSN2YDR443C FET5P43561 622 aa2.79□□□□□ -1.96
SSN2YDR443C MRX6P48564 524 aa2.79□□□□□ -1.96
SSN2YDR443C LYS4P49367 693 aaPredicted RBP2.79□□□□□ -1.96
SSN2YDR443C TOF2Q02208 771 aa2.79□□□□□ -1.96
SSN2YDR443C FDC1Q03034 503 aa2.79□□□□□ -1.96
SSN2YDR443C YML119WQ03208 357 aa2.79□□□□□ -1.96
SSN2YDR443C NOP6Q07623 225 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C COX17Q12287 69 aa2.79□□□□□ -1.96
SSN2YDR443C PSY3Q12318 242 aa2.79□□□□□ -1.96
SSN2YDR443C EDE1P34216 1381 aa2.79□□□□□ -1.96
SSN2YDR443C CFT1Q06632 1357 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C CLB1P24868 471 aa2.79□□□□□ -1.96
SSN2YDR443C HXT4P32467 576 aa2.79□□□□□ -1.96
SSN2YDR443C AFR1P33304 620 aa2.79□□□□□ -1.96
SSN2YDR443C WHI3P34761 661 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C SKI2P35207 1287 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
SSN2YDR443C ALG3P38179 458 aa2.79□□□□□ -1.96
SSN2YDR443C ATG14P38270 344 aa2.79□□□□□ -1.96
SSN2YDR443C EXO5P38289 585 aa2.79□□□□□ -1.96
SSN2YDR443C YIL165CP40446 119 aa2.79□□□□□ -1.96
SSN2YDR443C PKP1P40530 394 aa2.79□□□□□ -1.96
SSN2YDR443C VID28P40547 921 aa2.79□□□□□ -1.96
SSN2YDR443C BPL1P48445 690 aaPredicted RBP2.79□□□□□ -1.96
SSN2YDR443C NUP84P52891 726 aa2.79□□□□□ -1.96
SSN2YDR443C YBR126W-AQ8TGU7 68 aa2.79□□□□□ -1.96
SSN2YDR443C PRT1P06103 763 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C TY1A-LR4P0C2I8 440 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C TY1A-DR6P0CX70 440 aa2.79□□□□□ -1.96
SSN2YDR443C TY1A-ER1P0CX71 440 aa2.79□□□□□ -1.96
SSN2YDR443C TY1A-LR2P0CX72 440 aa2.79□□□□□ -1.96
SSN2YDR443C TY1A-PLP0CX73 440 aa2.79□□□□□ -1.96
SSN2YDR443C TY1A-JR1P0CX74 440 aa2.79□□□□□ -1.96
SSN2YDR443C TY1A-LR3P0CX75 440 aa2.79□□□□□ -1.96
SSN2YDR443C TY1A-ML2P0CX76 440 aa2.79□□□□□ -1.96
SSN2YDR443C NFS1P25374 497 aa2.79□□□□□ -1.96
SSN2YDR443C RIM11P38615 370 aa2.79□□□□□ -1.96
SSN2YDR443C SHU2P38957 223 aa2.79□□□□□ -1.96
SSN2YDR443C PIK1P39104 1066 aa2.79□□□□□ -1.96
SSN2YDR443C NAS2P40555 220 aa2.79□□□□□ -1.96
SSN2YDR443C DAM1P53267 343 aa2.79□□□□□ -1.96
SSN2YDR443C LSC1P53598 329 aaKnown RBP2.79□□□□□ -1.96
SSN2YDR443C VPS75P53853 264 aa2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 85.7 ms