RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W URK1P27515 501 aa2.97□□□□□ -1.93
VPS41YDR080W OSH3P38713 996 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W RTS1P38903 757 aa2.97□□□□□ -1.93
VPS41YDR080W LEE1Q02799 301 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W SLD5Q03406 294 aa2.97□□□□□ -1.93
VPS41YDR080W YDR514CQ04408 483 aa2.97□□□□□ -1.93
VPS41YDR080W OMS1Q06668 471 aa2.97□□□□□ -1.93
VPS41YDR080W IRC13Q08630 104 aa2.97□□□□□ -1.93
VPS41YDR080W CUP1-1P0CX80 61 aa2.97□□□□□ -1.93
VPS41YDR080W CUP1-2P0CX81 61 aa2.97□□□□□ -1.93
VPS41YDR080W KRS1P15180 591 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W RME1P32338 300 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W YKL091CP33324 310 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W PHO88P38264 188 aaPredicted RBP2.97□□□□□ -1.93
VPS41YDR080W ALD5P40047 520 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W BAP3P41815 604 aa2.97□□□□□ -1.93
VPS41YDR080W AZR1P50080 613 aa2.97□□□□□ -1.93
VPS41YDR080W DLT1Q04216 342 aa2.97□□□□□ -1.93
VPS41YDR080W REH1Q06709 432 aa2.97□□□□□ -1.93
VPS41YDR080W TKL1P23254 680 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W ERG6P25087 383 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W LYS9P38999 446 aa2.97□□□□□ -1.93
VPS41YDR080W MMF1P40185 145 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W CAF16P43569 289 aa2.97□□□□□ -1.93
VPS41YDR080W SGM1P47166 707 aa2.97□□□□□ -1.93
VPS41YDR080W ENP2P48234 707 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W TEX1P53851 422 aaKnown RBP2.97□□□□□ -1.93
VPS41YDR080W YMR321CQ04898 105 aa2.97□□□□□ -1.93
VPS41YDR080W SWC3P31376 625 aa2.96□□□□□ -1.94
VPS41YDR080W BUD16P39988 312 aa2.96□□□□□ -1.94
VPS41YDR080W FMP10P40098 244 aa2.96□□□□□ -1.94
VPS41YDR080W IRC8P47046 822 aa2.96□□□□□ -1.94
VPS41YDR080W VPS72Q03388 795 aa2.96□□□□□ -1.94
VPS41YDR080W CSI1Q04368 295 aa2.96□□□□□ -1.94
VPS41YDR080W RPN7Q06103 429 aaKnown RBP2.96□□□□□ -1.94
VPS41YDR080W YDL144CQ07589 356 aa2.96□□□□□ -1.94
VPS41YDR080W IRC10Q08118 586 aa2.96□□□□□ -1.94
VPS41YDR080W RPL40AP0CH08 128 aaKnown RBP2.96□□□□□ -1.94
VPS41YDR080W RPL40BP0CH09 128 aaKnown RBP2.96□□□□□ -1.94
VPS41YDR080W ADE2P21264 571 aaKnown RBP2.96□□□□□ -1.94
VPS41YDR080W MBR1P23493 339 aa2.96□□□□□ -1.94
VPS41YDR080W VBA3P25594 458 aa2.96□□□□□ -1.94
VPS41YDR080W HIR1P32479 840 aa2.96□□□□□ -1.94
VPS41YDR080W MTH1P35198 433 aa2.96□□□□□ -1.94
VPS41YDR080W YKR051WP36142 418 aa2.96□□□□□ -1.94
VPS41YDR080W YHR112CP38716 378 aa2.96□□□□□ -1.94
VPS41YDR080W PZF1P39933 429 aa2.96□□□□□ -1.94
VPS41YDR080W GIS1Q03833 894 aa2.96□□□□□ -1.94
VPS41YDR080W TMA64Q04600 565 aaKnown RBP2.96□□□□□ -1.94
VPS41YDR080W SDS3P40505 327 aa2.95□□□□□ -1.94
VPS41YDR080W OPT1P40897 799 aa2.95□□□□□ -1.94
VPS41YDR080W QRI1P43123 477 aaKnown RBP2.95□□□□□ -1.94
VPS41YDR080W BFA1P47113 574 aa2.95□□□□□ -1.94
VPS41YDR080W PIG1Q06216 648 aa2.95□□□□□ -1.94
VPS41YDR080W MCH5Q08777 521 aa2.95□□□□□ -1.94
VPS41YDR080W NCB2Q92317 146 aa2.95□□□□□ -1.94
VPS41YDR080W SRD1P09007 221 aa2.95□□□□□ -1.94
VPS41YDR080W IMG2P25642 146 aaPredicted RBP2.95□□□□□ -1.94
VPS41YDR080W BCD1P38772 366 aa2.95□□□□□ -1.94
VPS41YDR080W CRR1Q05790 422 aa2.95□□□□□ -1.94
VPS41YDR080W DIF1O13577 133 aa2.94□□□□□ -1.94
VPS41YDR080W LAT1P12695 482 aaKnown RBP2.94□□□□□ -1.94
VPS41YDR080W PCL2P25693 308 aa2.94□□□□□ -1.94
VPS41YDR080W MSH2P25847 964 aa2.94□□□□□ -1.94
VPS41YDR080W SAP190P36123 1033 aa2.94□□□□□ -1.94
VPS41YDR080W SLX1P38324 304 aa2.94□□□□□ -1.94
VPS41YDR080W RIM4P38741 713 aa2.94□□□□□ -1.94
VPS41YDR080W TVP23P38962 199 aa2.94□□□□□ -1.94
VPS41YDR080W YRB30P53107 440 aaPredicted RBP2.94□□□□□ -1.94
VPS41YDR080W GND2P53319 492 aa2.94□□□□□ -1.94
VPS41YDR080W PTA1Q01329 785 aaPredicted RBP2.94□□□□□ -1.94
VPS41YDR080W HMO1Q03973 246 aaKnown RBP2.94□□□□□ -1.94
VPS41YDR080W TAH18Q12181 623 aa2.94□□□□□ -1.94
VPS41YDR080W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
VPS41YDR080W SAM1P10659 382 aaKnown RBP2.94□□□□□ -1.94
VPS41YDR080W MAS2P11914 482 aa2.94□□□□□ -1.94
VPS41YDR080W MIP6P38760 659 aaKnown RBP2.94□□□□□ -1.94
VPS41YDR080W HRB1P38922 454 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
VPS41YDR080W HMF1P40037 129 aaKnown RBP2.94□□□□□ -1.94
VPS41YDR080W ALY2P47029 1046 aa2.94□□□□□ -1.94
VPS41YDR080W BNA2P47125 453 aa2.94□□□□□ -1.94
VPS41YDR080W MLC1P53141 149 aa2.94□□□□□ -1.94
VPS41YDR080W MTL1P53214 551 aa2.94□□□□□ -1.94
VPS41YDR080W YLR001CQ07895 862 aa2.94□□□□□ -1.94
VPS41YDR080W ACF2Q12168 779 aa2.94□□□□□ -1.94
VPS41YDR080W HRP1Q99383 534 aaKnown RBP2.94□□□□□ -1.94
VPS41YDR080W PHO8P11491 566 aa2.94□□□□□ -1.94
VPS41YDR080W CHS3P29465 1165 aa2.94□□□□□ -1.94
VPS41YDR080W REG2P38232 338 aa2.94□□□□□ -1.94
VPS41YDR080W VPS45P38932 577 aa2.94□□□□□ -1.94
VPS41YDR080W GID8P40208 455 aa2.94□□□□□ -1.94
VPS41YDR080W UBC11P52492 156 aa2.94□□□□□ -1.94
VPS41YDR080W SCS3P53012 380 aa2.94□□□□□ -1.94
VPS41YDR080W YGL242CP53066 181 aa2.94□□□□□ -1.94
VPS41YDR080W NRG1Q03125 231 aa2.94□□□□□ -1.94
VPS41YDR080W EMI2Q04409 500 aaKnown RBP2.94□□□□□ -1.94
VPS41YDR080W MRPL7P36519 292 aa2.93□□□□□ -1.94
VPS41YDR080W ARP1P38696 384 aa2.93□□□□□ -1.94
VPS41YDR080W GET2P40056 285 aa2.93□□□□□ -1.94
VPS41YDR080W VID27P40157 782 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 53 ms