RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C COX4P04037 155 aa7.09□□□□□ -1.27
TDP1YBR223C POX1P13711 748 aa7.09□□□□□ -1.27
TDP1YBR223C SPS22P25380 463 aa7.09□□□□□ -1.27
TDP1YBR223C HXT3P32466 567 aaKnown RBP7.09□□□□□ -1.27
TDP1YBR223C RRN3P36070 627 aa7.09□□□□□ -1.27
TDP1YBR223C KSP1P38691 1029 aaKnown RBP7.09□□□□□ -1.27
TDP1YBR223C SSP120P39931 234 aaKnown RBP7.09□□□□□ -1.27
TDP1YBR223C SAD1P43589 448 aa7.09□□□□□ -1.27
TDP1YBR223C YGR283CP53336 341 aaPredicted RBP7.09□□□□□ -1.27
TDP1YBR223C ALG11P53954 548 aaKnown RBP7.09□□□□□ -1.27
TDP1YBR223C BET4Q00618 327 aa7.09□□□□□ -1.27
TDP1YBR223C SLT2Q00772 484 aa7.09□□□□□ -1.27
TDP1YBR223C SNU56Q03782 492 aaKnown RBP7.09□□□□□ -1.27
TDP1YBR223C THI20Q08224 551 aa7.09□□□□□ -1.27
TDP1YBR223C CUE5Q08412 411 aaKnown RBP7.09□□□□□ -1.27
TDP1YBR223C VPS54Q12071 889 aa7.09□□□□□ -1.27
TDP1YBR223C TY3A-GQ12173 290 aa7.09□□□□□ -1.27
TDP1YBR223C TY3A-IQ99219 290 aa7.09□□□□□ -1.27
TDP1YBR223C RPL24AP04449 155 aaKnown RBP7.09□□□□□ -1.28
TDP1YBR223C MRPS28P21771 286 aa7.09□□□□□ -1.28
TDP1YBR223C MRM1P25270 412 aa7.09□□□□□ -1.28
TDP1YBR223C SAT4P25333 603 aaKnown RBP7.09□□□□□ -1.28
TDP1YBR223C LRE1P25579 583 aaKnown RBP7.09□□□□□ -1.28
TDP1YBR223C URA10P30402 227 aa7.09□□□□□ -1.28
TDP1YBR223C ABZ1P37254 787 aaPredicted RBP7.09□□□□□ -1.28
TDP1YBR223C AGP2P38090 596 aa7.09□□□□□ -1.28
TDP1YBR223C YHL008CP38750 627 aa7.09□□□□□ -1.28
TDP1YBR223C FRT2P39734 528 aa7.09□□□□□ -1.28
TDP1YBR223C PEP8P40335 379 aa7.09□□□□□ -1.28
TDP1YBR223C MRM2P53123 320 aa7.09□□□□□ -1.28
TDP1YBR223C SLP1Q12232 587 aa7.09□□□□□ -1.28
TDP1YBR223C IZH4Q99393 312 aa7.09□□□□□ -1.28
TDP1YBR223C ADE4P04046 510 aaKnown RBP7.08□□□□□ -1.28
TDP1YBR223C GLN3P18494 730 aa7.08□□□□□ -1.28
TDP1YBR223C YSC84P32793 468 aa7.08□□□□□ -1.28
TDP1YBR223C YME2P32843 850 aa7.08□□□□□ -1.28
TDP1YBR223C HSL7P38274 827 aa7.08□□□□□ -1.28
TDP1YBR223C SIC1P38634 284 aa7.08□□□□□ -1.28
TDP1YBR223C JEM1P40358 645 aa7.08□□□□□ -1.28
TDP1YBR223C YIL089WP40500 205 aa7.08□□□□□ -1.28
TDP1YBR223C MND2P40577 368 aa7.08□□□□□ -1.28
TDP1YBR223C POL31P46957 487 aa7.08□□□□□ -1.28
TDP1YBR223C PFD1P46988 109 aa7.08□□□□□ -1.28
TDP1YBR223C RFX1P48743 811 aa7.08□□□□□ -1.28
TDP1YBR223C COS6P53344 381 aa7.08□□□□□ -1.28
TDP1YBR223C HST2P53686 357 aa7.08□□□□□ -1.28
TDP1YBR223C CUS1Q02554 436 aaPredicted RBP7.08□□□□□ -1.28
TDP1YBR223C ACL4Q03771 387 aa7.08□□□□□ -1.28
TDP1YBR223C YMR160WQ03823 816 aa7.08□□□□□ -1.28
TDP1YBR223C NOT5Q12514 560 aaPredicted RBP7.08□□□□□ -1.28
TDP1YBR223C CTF3Q12748 733 aa7.08□□□□□ -1.28
TDP1YBR223C RIF1P29539 1916 aa7.07□□□□□ -1.28
TDP1YBR223C AMS1P22855 1083 aa7.07□□□□□ -1.28
TDP1YBR223C MSS51P32335 436 aa7.07□□□□□ -1.28
TDP1YBR223C TFC3P34111 1160 aa7.07□□□□□ -1.28
TDP1YBR223C NUP120P35729 1037 aa7.07□□□□□ -1.28
TDP1YBR223C CUE2P36075 443 aaKnown RBP7.07□□□□□ -1.28
TDP1YBR223C RRP14P36080 434 aaKnown RBP7.07□□□□□ -1.28
TDP1YBR223C LAM5P43560 674 aa7.07□□□□□ -1.28
TDP1YBR223C VTC4P47075 721 aa7.07□□□□□ -1.28
TDP1YBR223C ISM1P48526 1002 aa7.07□□□□□ -1.28
TDP1YBR223C RCF2P53721 224 aa7.07□□□□□ -1.28
TDP1YBR223C NOP13P53883 403 aaKnown RBP RIP-Chip data7.07□□□□□ -1.28not detected
TDP1YBR223C SLU7Q02775 382 aaKnown RBP7.07□□□□□ -1.28
TDP1YBR223C SPO19Q03029 223 aa7.07□□□□□ -1.28
TDP1YBR223C MUB1Q03162 620 aa7.07□□□□□ -1.28
TDP1YBR223C MSC2Q03455 724 aa7.07□□□□□ -1.28
TDP1YBR223C YML020WQ03722 664 aa7.07□□□□□ -1.28
TDP1YBR223C SND1Q04007 877 aa7.07□□□□□ -1.28
TDP1YBR223C RUP1Q12242 671 aa7.07□□□□□ -1.28
TDP1YBR223C OCA6Q12454 224 aa7.07□□□□□ -1.28
TDP1YBR223C ATG11Q12527 1178 aa7.07□□□□□ -1.28
TDP1YBR223C AI5_ALPHAQ9ZZX1 630 aa7.07□□□□□ -1.28
TDP1YBR223C TSR4P25040 408 aa7.06□□□□□ -1.28
TDP1YBR223C FRE1P32791 686 aa7.06□□□□□ -1.28
TDP1YBR223C CYM1P32898 989 aa7.06□□□□□ -1.28
TDP1YBR223C PEX5P35056 612 aa7.06□□□□□ -1.28
TDP1YBR223C GPT2P36148 743 aa7.06□□□□□ -1.28
TDP1YBR223C TGL4P36165 910 aa7.06□□□□□ -1.28
TDP1YBR223C AIM18P38884 321 aa7.06□□□□□ -1.28
TDP1YBR223C DSE1P40077 573 aa7.06□□□□□ -1.28
TDP1YBR223C YER186CP40101 306 aa7.06□□□□□ -1.28
TDP1YBR223C GVP36P40531 326 aaKnown RBP7.06□□□□□ -1.28
TDP1YBR223C RLP7P40693 322 aaKnown RBP7.06□□□□□ -1.28
TDP1YBR223C SEC27P41811 889 aaKnown RBP7.06□□□□□ -1.28
TDP1YBR223C YFL012WP43580 148 aa7.06□□□□□ -1.28
TDP1YBR223C SUM1P46676 1062 aa7.06□□□□□ -1.28
TDP1YBR223C MAD3P47074 515 aa7.06□□□□□ -1.28
TDP1YBR223C MCM6P53091 1017 aaKnown RBP7.06□□□□□ -1.28
TDP1YBR223C OSH6Q02201 448 aa7.06□□□□□ -1.28
TDP1YBR223C DOT1Q04089 582 aaKnown RBP7.06□□□□□ -1.28
TDP1YBR223C DIA2Q08496 732 aaPredicted RBP7.06□□□□□ -1.28
TDP1YBR223C TYW1Q08960 810 aaKnown RBP7.06□□□□□ -1.28
TDP1YBR223C KCS1Q12494 1050 aa7.06□□□□□ -1.28
TDP1YBR223C RTP1Q12751 981 aa7.06□□□□□ -1.28
TDP1YBR223C ERR1P0CX10 437 aa7.05□□□□□ -1.28
TDP1YBR223C ERR2P0CX11 437 aa7.05□□□□□ -1.28
TDP1YBR223C AFT1P22149 690 aa7.05□□□□□ -1.28
TDP1YBR223C GID7P25569 745 aa7.05□□□□□ -1.28
TDP1YBR223C RAD14P28519 371 aa7.05□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms