RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 ALDH1A1P00352 501 aa31.08■■■□□ 2.57
VEGFA-230ENST00000640482 CDC42EP5Q6NZY7 148 aa31.08■■■□□ 2.57
VEGFA-230ENST00000640482 DZIP1Q86YF9 867 aaKnown RBP31.08■■■□□ 2.57
VEGFA-230ENST00000640482 SLF2Q8IX21 1173 aa31.08■■■□□ 2.57
VEGFA-230ENST00000640482 MAP3K9P80192 1104 aa31.07■■■□□ 2.56
VEGFA-230ENST00000640482 ELP3Q9H9T3 547 aa31.07■■■□□ 2.56
VEGFA-230ENST00000640482 CSADQ9Y600 493 aa31.07■■■□□ 2.56
VEGFA-230ENST00000640482 SURF6O75683 361 aaKnown RBP31.06■■■□□ 2.56
VEGFA-230ENST00000640482 DCAF15Q66K64 600 aa31.06■■■□□ 2.56
VEGFA-230ENST00000640482 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.06■■■□□ 2.56
VEGFA-230ENST00000640482 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.06■■■□□ 2.561e-6■□□□□ 11.1
VEGFA-230ENST00000640482 PANK1Q8TE04 598 aa31.06■■■□□ 2.56
VEGFA-230ENST00000640482 FAM151AQ8WW52 585 aa31.06■■■□□ 2.56
VEGFA-230ENST00000640482 GPR108Q9NPR9 543 aa31.06■■■□□ 2.56
VEGFA-230ENST00000640482 USP40Q9NVE5 1235 aa31.06■■■□□ 2.56
VEGFA-230ENST00000640482 OPTNQ96CV9 577 aa31.05■■■□□ 2.56
VEGFA-230ENST00000640482 CFHR5Q9BXR6 569 aa31.05■■■□□ 2.56
VEGFA-230ENST00000640482 OTOFQ9HC10 1997 aa31.05■■■□□ 2.56
VEGFA-230ENST00000640482 ARID4AP29374 1257 aaPredicted RBP31.04■■■□□ 2.56
VEGFA-230ENST00000640482 GJA5P36382 358 aa31.04■■■□□ 2.56
VEGFA-230ENST00000640482 VGLL4Q14135 290 aa31.04■■■□□ 2.56
VEGFA-230ENST00000640482 NOM1Q5C9Z4 860 aaKnown RBP31.04■■■□□ 2.56
VEGFA-230ENST00000640482 ERICH6Q7L0X2 663 aa31.04■■■□□ 2.56
VEGFA-230ENST00000640482 IFNL1Q8IU54 200 aa31.04■■■□□ 2.56
VEGFA-230ENST00000640482 HMG20BQ9P0W2 317 aa31.04■■■□□ 2.56
VEGFA-230ENST00000640482 GAKO14976 1311 aa31.03■■■□□ 2.56
VEGFA-230ENST00000640482 UQCRFS1P1P0C7P4 283 aa31.03■■■□□ 2.56
VEGFA-230ENST00000640482 SPATA5Q8NB90 893 aa31.03■■■□□ 2.56
VEGFA-230ENST00000640482 NOP58Q9Y2X3 529 aaKnown RBP31.03■■■□□ 2.56
VEGFA-230ENST00000640482 TCP10Q12799 353 aa31.02■■■□□ 2.56
VEGFA-230ENST00000640482 TNNI3KQ59H18 835 aa31.02■■■□□ 2.56
VEGFA-230ENST00000640482 FAM163AQ96GL9 167 aaPredicted RBP31.02■■■□□ 2.56
VEGFA-230ENST00000640482 WRNIP1Q96S55 665 aa31.02■■■□□ 2.56
VEGFA-230ENST00000640482 FPGT-TNNI3KV9GXZ4 949 aa31.02■■■□□ 2.56
VEGFA-230ENST00000640482 GPR25O00155 361 aa31.01■■■□□ 2.55
VEGFA-230ENST00000640482 NFIAQ12857 509 aa31.01■■■□□ 2.55
VEGFA-230ENST00000640482 OTUD7BQ6GQQ9 843 aa31.01■■■□□ 2.55
VEGFA-230ENST00000640482 CTU1Q7Z7A3 348 aaKnown RBP31.01■■■□□ 2.55
VEGFA-230ENST00000640482 ZNF341Q9BYN7 854 aa31.01■■■□□ 2.55
VEGFA-230ENST00000640482 LAMB1P07942 1786 aa31.01■■■□□ 2.55
VEGFA-230ENST00000640482 CEP85Q6P2H3 762 aa31■■■□□ 2.55
VEGFA-230ENST00000640482 ZNF296Q8WUU4 475 aaPredicted RBP31■■■□□ 2.55
VEGFA-230ENST00000640482 CCDC85CA6NKD9 419 aa30.99■■■□□ 2.55
VEGFA-230ENST00000640482 MECOMQ03112 1051 aa30.99■■■□□ 2.55
VEGFA-230ENST00000640482 CCDC158Q5M9N0 1113 aa30.99■■■□□ 2.55
VEGFA-230ENST00000640482 FAM198AQ9UFP1 575 aa30.99■■■□□ 2.55
VEGFA-230ENST00000640482 RCAN3Q9UKA8 241 aa30.99■■■□□ 2.55
VEGFA-230ENST00000640482 MROH7-TTC4A0A0A0MT08 1334 aa30.98■■■□□ 2.55
VEGFA-230ENST00000640482 MYH2Q9UKX2 1941 aa30.98■■■□□ 2.55
VEGFA-230ENST00000640482 TESPA1A2RU30 521 aaPredicted RBP30.98■■■□□ 2.55
VEGFA-230ENST00000640482 IGF2BP3O00425 579 aaKnown RBP eCLIP30.98■■■□□ 2.55
VEGFA-230ENST00000640482 MCAMP43121 646 aa30.98■■■□□ 2.55
VEGFA-230ENST00000640482 TTC39AQ5SRH9 613 aa30.98■■■□□ 2.55
VEGFA-230ENST00000640482 PI16Q6UXB8 463 aa30.98■■■□□ 2.55
VEGFA-230ENST00000640482 IDI2Q9BXS1 227 aa30.98■■■□□ 2.55
VEGFA-230ENST00000640482 GSTO1P78417 241 aa30.97■■■□□ 2.55
VEGFA-230ENST00000640482 MIGA2Q7L4E1 593 aa30.97■■■□□ 2.55
VEGFA-230ENST00000640482 OTUD5Q96G74 571 aa30.97■■■□□ 2.55
VEGFA-230ENST00000640482 SNCAIPQ9Y6H5 919 aa30.97■■■□□ 2.55
VEGFA-230ENST00000640482 SPDYE5A6NIY4 337 aa30.96■■■□□ 2.55
VEGFA-230ENST00000640482 ENTPD3O75355 529 aa30.96■■■□□ 2.55
VEGFA-230ENST00000640482 LDHCP07864 332 aa30.96■■■□□ 2.55
VEGFA-230ENST00000640482 BTDP43251 543 aa30.96■■■□□ 2.55
VEGFA-230ENST00000640482 GTF2A2P52657 109 aa30.96■■■□□ 2.55
VEGFA-230ENST00000640482 CNKSR2Q8WXI2 1034 aa30.96■■■□□ 2.55
VEGFA-230ENST00000640482 DBNDD2Q9BQY9 259 aa30.96■■■□□ 2.55
VEGFA-230ENST00000640482 FKTNO75072 461 aa30.95■■■□□ 2.55
VEGFA-230ENST00000640482 RGS3P49796 1198 aa30.95■■■□□ 2.55
VEGFA-230ENST00000640482 TBC1D9Q6ZT07 1266 aa30.95■■■□□ 2.55
VEGFA-230ENST00000640482 ERO1BQ86YB8 467 aa30.95■■■□□ 2.55
VEGFA-230ENST00000640482 ZKSCAN4Q969J2 545 aaPredicted RBP30.95■■■□□ 2.55
VEGFA-230ENST00000640482 MS4A4AQ96JQ5 239 aa30.95■■■□□ 2.55
VEGFA-230ENST00000640482 R3HDMLQ9H3Y0 253 aa30.95■■■□□ 2.55
VEGFA-230ENST00000640482 RAI14Q9P0K7 980 aa30.95■■■□□ 2.55
VEGFA-230ENST00000640482 DDX19BQ9UMR2 479 aa30.95■■■□□ 2.55
VEGFA-230ENST00000640482 NSUN4Q96CB9 384 aaKnown RBP30.94■■■□□ 2.54
VEGFA-230ENST00000640482 LRP2BPQ9P2M1 347 aa30.94■■■□□ 2.54
VEGFA-230ENST00000640482 GPR75-ASB3A0A0A6YYF3 556 aa30.93■■■□□ 2.54
VEGFA-230ENST00000640482 ERC1Q8IUD2 1116 aa30.93■■■□□ 2.54
VEGFA-230ENST00000640482 PTPN18Q99952 460 aa30.93■■■□□ 2.54
VEGFA-230ENST00000640482 RFX7Q2KHR2 1363 aa30.92■■■□□ 2.54
VEGFA-230ENST00000640482 CCL15-CCL14A0A0B4J2E2 113 aa30.92■■■□□ 2.54
VEGFA-230ENST00000640482 PKN2Q16513 984 aaKnown RBP30.92■■■□□ 2.54
VEGFA-230ENST00000640482 CCL15Q16663 113 aa30.92■■■□□ 2.54
VEGFA-230ENST00000640482 ZFPM1Q8IX07 1006 aa30.92■■■□□ 2.54
VEGFA-230ENST00000640482 ZNF384Q8TF68 577 aa30.92■■■□□ 2.54
VEGFA-230ENST00000640482 ZNF512BQ96KM6 892 aaPredicted RBP30.92■■■□□ 2.54
VEGFA-230ENST00000640482 CHMP4BQ9H444 224 aaKnown RBP30.92■■■□□ 2.54
VEGFA-230ENST00000640482 ZNF112Q9UJU3 913 aa30.92■■■□□ 2.54
VEGFA-230ENST00000640482 COG6Q9Y2V7 657 aa30.92■■■□□ 2.54
VEGFA-230ENST00000640482 WDHD1O75717 1129 aaPredicted RBP30.91■■■□□ 2.54
VEGFA-230ENST00000640482 MAP4K4O95819 1239 aaPredicted RBP30.91■■■□□ 2.54
VEGFA-230ENST00000640482 HSP90AB4PQ58FF6 505 aa30.91■■■□□ 2.54
VEGFA-230ENST00000640482 ZSCAN29Q8IWY8 852 aaPredicted RBP30.91■■■□□ 2.54
VEGFA-230ENST00000640482 SNRKQ9NRH2 765 aa30.91■■■□□ 2.54
VEGFA-230ENST00000640482 INPP5BP32019 993 aa30.9■■■□□ 2.54
VEGFA-230ENST00000640482 PPIL2Q13356 520 aa30.9■■■□□ 2.54
VEGFA-230ENST00000640482 BRI3BPQ8WY22 251 aa30.9■■■□□ 2.54
VEGFA-230ENST00000640482 DBNLQ9UJU6 430 aaKnown RBP30.9■■■□□ 2.54
VEGFA-230ENST00000640482 EXOC6BQ9Y2D4 811 aa30.9■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 259.1 ms