RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 ARMCX5Q6P1M9 558 aa16.85■□□□□ 0.29
CLN6-215ENST00000636674 IFNKQ9P0W0 207 aa16.85■□□□□ 0.29
CLN6-215ENST00000636674 HPSEQ9Y251 543 aa16.85■□□□□ 0.29
CLN6-215ENST00000636674 MORC2Q9Y6X9 1032 aaPredicted RBP16.85■□□□□ 0.29
CLN6-215ENST00000636674 COL14A1Q05707 1796 aaKnown RBP16.85■□□□□ 0.29
CLN6-215ENST00000636674 ANKRD36CQ5JPF3 1778 aa16.85■□□□□ 0.29
CLN6-215ENST00000636674 ARAP2Q8WZ64 1704 aa16.85■□□□□ 0.29
CLN6-215ENST00000636674 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.84■□□□□ 0.29
CLN6-215ENST00000636674 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLN6-215ENST00000636674 ANGEL1Q9UNK9 670 aaKnown RBP16.84■□□□□ 0.29
CLN6-215ENST00000636674 COL5A2P05997 1499 aaPredicted RBP16.84■□□□□ 0.29
CLN6-215ENST00000636674 BCL9LQ86UU0 1499 aa16.84■□□□□ 0.29
CLN6-215ENST00000636674 MYO1BO43795 1136 aa16.84■□□□□ 0.29
CLN6-215ENST00000636674 NRDCO43847 1150 aa16.84■□□□□ 0.29
CLN6-215ENST00000636674 CDKL5O76039 1030 aa16.84■□□□□ 0.29
CLN6-215ENST00000636674 SLU7O95391 586 aaKnown RBP16.84■□□□□ 0.29
CLN6-215ENST00000636674 SFPQP23246 707 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLN6-215ENST00000636674 NAA30Q147X3 362 aaPredicted RBP16.84■□□□□ 0.29
CLN6-215ENST00000636674 NBPF3Q9H094 633 aa16.84■□□□□ 0.29
CLN6-215ENST00000636674 USP21Q9UK80 565 aa16.84■□□□□ 0.29
CLN6-215ENST00000636674 CDHR2Q9BYE9 1310 aa16.83■□□□□ 0.28
CLN6-215ENST00000636674 SMC2O95347 1197 aa16.83■□□□□ 0.28
CLN6-215ENST00000636674 ADD2P35612 726 aa16.83■□□□□ 0.28
CLN6-215ENST00000636674 GABPB1Q06547 395 aaPredicted RBP16.83■□□□□ 0.28
CLN6-215ENST00000636674 TMC6Q7Z403 805 aa16.83■□□□□ 0.28
CLN6-215ENST00000636674 JMYQ8N9B5 988 aa16.83■□□□□ 0.28
CLN6-215ENST00000636674 PPP1R13BQ96KQ4 1090 aa16.83■□□□□ 0.28
CLN6-215ENST00000636674 TRMT1Q9NXH9 659 aaKnown RBP16.83■□□□□ 0.28
CLN6-215ENST00000636674 TIAM2Q8IVF5 1701 aa16.83■□□□□ 0.28
CLN6-215ENST00000636674 CHD4Q14839 1912 aa16.83■□□□□ 0.28
CLN6-215ENST00000636674 LRP5O75197 1615 aa16.83■□□□□ 0.28
CLN6-215ENST00000636674 SH2B2O14492 632 aaPredicted RBP16.82■□□□□ 0.28
CLN6-215ENST00000636674 WDHD1O75717 1129 aaPredicted RBP16.82■□□□□ 0.28
CLN6-215ENST00000636674 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
CLN6-215ENST00000636674 MAP3K15Q6ZN16 1313 aa16.82■□□□□ 0.28
CLN6-215ENST00000636674 MYO5AQ9Y4I1 1855 aaKnown RBP16.82■□□□□ 0.28
CLN6-215ENST00000636674 TRDNQ13061 729 aa16.82■□□□□ 0.28
CLN6-215ENST00000636674 PTPAQ15257 358 aa16.82■□□□□ 0.28
CLN6-215ENST00000636674 VPS37DQ86XT2 251 aa16.82■□□□□ 0.28
CLN6-215ENST00000636674 ZBTB38Q8NAP3 1195 aaPredicted RBP16.82■□□□□ 0.28
CLN6-215ENST00000636674 HSD3B7Q9H2F3 369 aa16.82■□□□□ 0.28
CLN6-215ENST00000636674 FAM53CQ9NYF3 392 aa16.82■□□□□ 0.28
CLN6-215ENST00000636674 DOCK2Q92608 1830 aa16.81■□□□□ 0.28
CLN6-215ENST00000636674 CCP110O43303 1012 aa16.81■□□□□ 0.28
CLN6-215ENST00000636674 SYKP43405 635 aa16.81■□□□□ 0.28
CLN6-215ENST00000636674 FANCCQ00597 558 aa16.81■□□□□ 0.28
CLN6-215ENST00000636674 IFIT5Q13325 482 aaKnown RBP16.81■□□□□ 0.28
CLN6-215ENST00000636674 TTF1Q15361 905 aaPredicted RBP16.81■□□□□ 0.28
CLN6-215ENST00000636674 UBE3CQ15386 1083 aa16.81■□□□□ 0.28
CLN6-215ENST00000636674 FBXW7Q969H0 707 aa16.81■□□□□ 0.28
CLN6-215ENST00000636674 ALG1Q9BT22 464 aa16.81■□□□□ 0.28
CLN6-215ENST00000636674 QTRT2Q9H974 415 aaKnown RBP16.81■□□□□ 0.28
CLN6-215ENST00000636674 GJB4Q9NTQ9 266 aa16.81■□□□□ 0.28
CLN6-215ENST00000636674 RIPOR2Q9Y4F9 1068 aa16.81■□□□□ 0.28
CLN6-215ENST00000636674 SOCS7O14512 581 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 MCAMP43121 646 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 METAP2P50579 478 aaKnown RBP eCLIP16.8■□□□□ 0.28
CLN6-215ENST00000636674 KMT5BQ4FZB7 885 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 CPLX2Q6PUV4 134 aaKnown RBP16.8■□□□□ 0.28
CLN6-215ENST00000636674 ELOA2Q8IYF1 753 aaPredicted RBP16.8■□□□□ 0.28
CLN6-215ENST00000636674 TMEM87BQ96K49 555 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.8■□□□□ 0.28
CLN6-215ENST00000636674 TRPC5Q9UL62 973 aaPredicted RBP16.8■□□□□ 0.28
CLN6-215ENST00000636674 NID2Q14112 1375 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 STK36Q9NRP7 1315 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 CBFA2T2O43439 604 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 RXRBP28702 533 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 CCDC93Q567U6 631 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 TAF7LQ5H9L4 462 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 RESP18Q5W5W9 173 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 KRT40Q6A162 431 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 APOA5Q6Q788 366 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 TBC1D10CQ8IV04 446 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
CLN6-215ENST00000636674 BIN1O00499 593 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 MYL5Q02045 173 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 SHC4Q6S5L8 630 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 PI16Q6UXB8 463 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 SGMS1Q86VZ5 419 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 IL2RBP14784 551 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 HSP90AB3PQ58FF7 597 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 CYB5R4Q7L1T6 521 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 VGLL2Q8N8G2 317 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 TEX13AQ9BXU3 409 aaPredicted RBP16.79■□□□□ 0.28
CLN6-215ENST00000636674 TMX1Q9H3N1 280 aa16.79■□□□□ 0.28
CLN6-215ENST00000636674 PHLPP2Q6ZVD8 1323 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 CUTAO60888 179 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 ALX1Q15699 326 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 ELF2Q15723 593 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 NTRK3Q16288 839 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 FBXO38Q6PIJ6 1188 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 KIF6Q6ZMV9 814 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 TOM1L2Q6ZVM7 507 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 FCHSD1Q86WN1 690 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 RAB11FIP4Q86YS3 637 aa16.78■□□□□ 0.28
CLN6-215ENST00000636674 LMOD1P29536 600 aaPredicted RBP16.77■□□□□ 0.28
CLN6-215ENST00000636674 MARCKSP29966 332 aaPredicted RBP16.77■□□□□ 0.28
CLN6-215ENST00000636674 METTL24Q5JXM2 366 aa16.77■□□□□ 0.28
CLN6-215ENST00000636674 KRT222Q8N1A0 295 aa16.77■□□□□ 0.28
CLN6-215ENST00000636674 FAM89AQ96GI7 184 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms