RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 NAIF1Q69YI7 327 aaPredicted RBP14.32□□□□□ -0.12
LITAF-221ENST00000622633 AGXT2Q9BYV1 514 aa14.32□□□□□ -0.12
LITAF-221ENST00000622633 ARFGEF2Q9Y6D5 1785 aa14.32□□□□□ -0.12
LITAF-221ENST00000622633 A0A087WWV3 80 aa14.32□□□□□ -0.12
LITAF-221ENST00000622633 C11orf57Q6ZUT1 292 aaPredicted RBP14.32□□□□□ -0.12
LITAF-221ENST00000622633 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
LITAF-221ENST00000622633 AK7Q96M32 723 aa14.32□□□□□ -0.12
LITAF-221ENST00000622633 TMEM94Q12767 1356 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 FOXR1Q6PIV2 292 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 EXOC4Q96A65 974 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 COL18A1P39060 1754 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 IVLP07476 585 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 IQCB1Q15051 598 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 ZSCAN25Q6NSZ9 544 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 ZCRB1Q8TBF4 217 aaKnown RBP14.31□□□□□ -0.12
LITAF-221ENST00000622633 MIEF2Q96C03 454 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
LITAF-221ENST00000622633 CCDC85AQ96PX6 553 aaPredicted RBP14.31□□□□□ -0.12
LITAF-221ENST00000622633 CEP126Q9P2H0 1117 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 CLIP2Q9UDT6 1046 aa14.31□□□□□ -0.12
LITAF-221ENST00000622633 C21orf2O43822 256 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 ADORA1P30542 326 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 ME1P48163 572 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 LMAN1P49257 510 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 HAND2P61296 217 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 SNW1Q13573 536 aaKnown RBP14.3□□□□□ -0.12
LITAF-221ENST00000622633 ILDR1Q86SU0 546 aaPredicted RBP14.3□□□□□ -0.12
LITAF-221ENST00000622633 NBPF3Q9H094 633 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 GOLGA6L19H0YKK7 550 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 SMC2O95347 1197 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 CCDC144BQ3MJ40 725 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 OTUD7BQ6GQQ9 843 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 CCDC73Q6ZRK6 1079 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.3□□□□□ -0.12
LITAF-221ENST00000622633 CCDC144CPQ8IYA2 1237 aa14.3□□□□□ -0.12
LITAF-221ENST00000622633 ZNF274Q96GC6 653 aaPredicted RBP14.3□□□□□ -0.12
LITAF-221ENST00000622633 SALL1Q9NSC2 1324 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 FDPSP14324 419 aaKnown RBP14.29□□□□□ -0.12
LITAF-221ENST00000622633 WASHC4Q2M389 1173 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 GORABQ5T7V8 394 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 FSIP1Q8NA03 581 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 CACTINQ8WUQ7 758 aaKnown RBP14.29□□□□□ -0.12
LITAF-221ENST00000622633 ERCC4Q92889 916 aaPredicted RBP14.29□□□□□ -0.12
LITAF-221ENST00000622633 ADAM21Q9UKJ8 722 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 ZNF330Q9Y3S2 320 aaPredicted RBP14.29□□□□□ -0.12
LITAF-221ENST00000622633 CTAGE5O15320 804 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 CIAO1O76071 339 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 NYAP1Q6ZVC0 841 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 TOM1L2Q6ZVM7 507 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 TATDN2Q93075 761 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 FAM210AQ96ND0 272 aa14.29□□□□□ -0.12
LITAF-221ENST00000622633 SPATA31A3Q5VYP0 1347 aa14.28□□□□□ -0.12
LITAF-221ENST00000622633 ANKRD65E5RJM6 399 aa14.28□□□□□ -0.12
LITAF-221ENST00000622633 KINO60870 393 aaKnown RBP14.28□□□□□ -0.12
LITAF-221ENST00000622633 CAVIN2O95810 425 aa14.28□□□□□ -0.12
LITAF-221ENST00000622633 TPM1P09493 284 aa14.28□□□□□ -0.12
LITAF-221ENST00000622633 STX1AQ16623 288 aa14.28□□□□□ -0.12
LITAF-221ENST00000622633 TTC39AQ5SRH9 613 aa14.28□□□□□ -0.12
LITAF-221ENST00000622633 ENGASEQ8NFI3 743 aa14.28□□□□□ -0.12
LITAF-221ENST00000622633 FBXW7Q969H0 707 aa14.28□□□□□ -0.12
LITAF-221ENST00000622633 SRRTQ9BXP5 876 aaKnown RBP14.28□□□□□ -0.12
LITAF-221ENST00000622633 GLI3P10071 1580 aa14.27□□□□□ -0.12
LITAF-221ENST00000622633 CCDC57Q2TAC2 916 aa14.27□□□□□ -0.12
LITAF-221ENST00000622633 TNS3Q68CZ2 1445 aa14.27□□□□□ -0.12
LITAF-221ENST00000622633 RAB11FIP4Q86YS3 637 aa14.27□□□□□ -0.12
LITAF-221ENST00000622633 XAGE2Q96GT9 111 aa14.27□□□□□ -0.12
LITAF-221ENST00000622633 CARMIL3Q8ND23 1372 aa14.27□□□□□ -0.12
LITAF-221ENST00000622633 ERVV-2B6SEH9 535 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 FOXP2O15409 715 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 MNAT1P51948 309 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 FAM160A1Q05DH4 1040 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 SCARF1Q14162 830 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 ARID5BQ14865 1188 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 CCDC158Q5M9N0 1113 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 ATL3Q6DD88 541 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 TMCO3Q6UWJ1 677 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 PCDH11XQ9BZA7 1347 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 PCDH11YQ9BZA8 1340 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 LAMA4Q16363 1823 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 ADAMTSL3P82987 1691 aa14.27□□□□□ -0.13
LITAF-221ENST00000622633 USP27XA6NNY8 438 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 KIF2AO00139 706 aaPredicted RBP14.26□□□□□ -0.13
LITAF-221ENST00000622633 SASH3O75995 380 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 FGAP02671 866 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 LRRN4CLQ8ND94 238 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 SLC24A3Q9HC58 644 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 PCDHA7Q9UN72 937 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 ABCC6O95255 1503 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 BECN2A8MW95 431 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 RPS6KA5O75582 802 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 POLR3DP05423 398 aaPredicted RBP14.26□□□□□ -0.13
LITAF-221ENST00000622633 IRX1P78414 480 aaPredicted RBP14.26□□□□□ -0.13
LITAF-221ENST00000622633 SMC1AQ14683 1233 aaKnown RBP14.26□□□□□ -0.13
LITAF-221ENST00000622633 LEKR1Q6ZMV7 388 aa14.26□□□□□ -0.13
LITAF-221ENST00000622633 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.26□□□□□ -0.13
LITAF-221ENST00000622633 ATP8B1O43520 1251 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 PRC1O43663 620 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 NEBLO76041 1014 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 CDC25BP30305 580 aa14.25□□□□□ -0.13
LITAF-221ENST00000622633 ZAP70P43403 619 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms