RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 DCAF5Q96JK2 942 aa6.88□□□□□ -1.31
SRSF4-207ENST00000622143 PIM2Q9P1W9 311 aa6.88□□□□□ -1.31
SRSF4-207ENST00000622143 SRP68Q9UHB9 627 aaKnown RBP6.88□□□□□ -1.31
SRSF4-207ENST00000622143 MAP2P11137 1827 aaKnown RBP6.87□□□□□ -1.31
SRSF4-207ENST00000622143 A0A1W2PP64 1363 aa6.87□□□□□ -1.31
SRSF4-207ENST00000622143 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
SRSF4-207ENST00000622143 TMEM88BA6NKF7 163 aa6.87□□□□□ -1.31
SRSF4-207ENST00000622143 THBS1P07996 1170 aa6.87□□□□□ -1.31
SRSF4-207ENST00000622143 SLURP2P0DP57 97 aa6.87□□□□□ -1.31
SRSF4-207ENST00000622143 VEGFAP15692 232 aaPredicted RBP6.87□□□□□ -1.31
SRSF4-207ENST00000622143 CTCFP49711 727 aaPredicted RBP6.87□□□□□ -1.31
SRSF4-207ENST00000622143 TRIM26Q12899 539 aaPredicted RBP6.87□□□□□ -1.31
SRSF4-207ENST00000622143 TRAPPC3LQ5T215 181 aa6.87□□□□□ -1.31
SRSF4-207ENST00000622143 TAS1R3Q7RTX0 852 aa6.87□□□□□ -1.31
SRSF4-207ENST00000622143 USTQ9Y2C2 406 aa6.87□□□□□ -1.31
SRSF4-207ENST00000622143 EDC4Q6P2E9 1401 aaKnown RBP6.86□□□□□ -1.31
SRSF4-207ENST00000622143 SBF1O95248 1867 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 GLTPD2A6NH11 291 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 GYS1P13807 737 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 DDR1Q08345 913 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 C4orf17Q53FE4 359 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 ZNF295-AS1Q8N0V1 137 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 GMCL1Q96IK5 515 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 TIMMDC1Q9NPL8 285 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 PRDM10Q9NQV6 1147 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 TMOD3Q9NYL9 352 aa6.86□□□□□ -1.31
SRSF4-207ENST00000622143 RTCBQ9Y3I0 505 aaKnown RBP6.86□□□□□ -1.31
SRSF4-207ENST00000622143 ROCK2O75116 1388 aaKnown RBP6.85□□□□□ -1.31
SRSF4-207ENST00000622143 CNTNAP1P78357 1384 aa6.85□□□□□ -1.31
SRSF4-207ENST00000622143 M0R2N6 131 aa6.85□□□□□ -1.31
SRSF4-207ENST00000622143 BACH1O14867 736 aa6.85□□□□□ -1.31
SRSF4-207ENST00000622143 HSPA8P11142 646 aaKnown RBP6.85□□□□□ -1.31
SRSF4-207ENST00000622143 RFC4P35249 363 aa6.85□□□□□ -1.31
SRSF4-207ENST00000622143 GRM1Q13255 1194 aa6.85□□□□□ -1.31
SRSF4-207ENST00000622143 NPM2Q86SE8 214 aaKnown RBP6.85□□□□□ -1.31
SRSF4-207ENST00000622143 NLGN1Q8N2Q7 840 aa6.85□□□□□ -1.31
SRSF4-207ENST00000622143 COG3Q96JB2 828 aa6.85□□□□□ -1.31
SRSF4-207ENST00000622143 HINFPQ9BQA5 517 aa6.85□□□□□ -1.31
SRSF4-207ENST00000622143 SMG6Q86US8 1419 aaKnown RBP6.84□□□□□ -1.31
SRSF4-207ENST00000622143 F11P03951 625 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 SMTNP53814 917 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 EPHA4P54764 986 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 SWI5Q1ZZU3 235 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 HSP90AB2PQ58FF8 381 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 ZNF385CQ66K41 422 aaPredicted RBP6.84□□□□□ -1.31
SRSF4-207ENST00000622143 TMEM151AQ8N4L1 468 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 SLC4A9Q96Q91 983 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 GGNBP2Q9H3C7 697 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 GPAMQ9HCL2 828 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 ATG3Q9NT62 314 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 USP3Q9Y6I4 520 aa6.84□□□□□ -1.31
SRSF4-207ENST00000622143 A6NJY4 79 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 GPR25O00155 361 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 PRMT3O60678 531 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 GDF11O95390 407 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 LMNB1P20700 586 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 PLA2G4AP47712 749 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 UBAP2LQ14157 1087 aaKnown RBP6.83□□□□□ -1.32
SRSF4-207ENST00000622143 TBCELQ5QJ74 424 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 GAS2L2Q8NHY3 880 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 RHBDD1Q8TEB9 315 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 WHAMMQ8TF30 809 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 L3MBTL2Q969R5 705 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 TSPAN10Q9H1Z9 355 aaPredicted RBP6.83□□□□□ -1.32
SRSF4-207ENST00000622143 IQSEC3Q9UPP2 1182 aaPredicted RBP6.83□□□□□ -1.32
SRSF4-207ENST00000622143 CCDC88AQ3V6T2 1871 aa6.83□□□□□ -1.32
SRSF4-207ENST00000622143 CGNL1Q0VF96 1302 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 A0A1B0GTH6 734 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 NFKBIEO00221 500 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 DDNO94850 711 aaPredicted RBP6.82□□□□□ -1.32
SRSF4-207ENST00000622143 SRSF11Q05519 484 aaKnown RBP6.82□□□□□ -1.32
SRSF4-207ENST00000622143 MTFR1Q15390 333 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 SLC9A9Q8IVB4 645 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 PGBD3Q8N328 593 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 CLP1Q92989 425 aaKnown RBP6.82□□□□□ -1.32
SRSF4-207ENST00000622143 GTPBP3Q969Y2 492 aaKnown RBP6.82□□□□□ -1.32
SRSF4-207ENST00000622143 PRIMPOLQ96LW4 560 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 KRTAP4-12Q9BQ66 201 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 TERF2IPQ9NYB0 399 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 SCHIP1Q9P0W5 487 aaPredicted RBP6.82□□□□□ -1.32
SRSF4-207ENST00000622143 KDM6AO15550 1401 aaPredicted RBP6.82□□□□□ -1.32
SRSF4-207ENST00000622143 KDRP35968 1356 aa6.82□□□□□ -1.32
SRSF4-207ENST00000622143 H7C1W4 665 aa6.81□□□□□ -1.32
SRSF4-207ENST00000622143 PPM1GO15355 546 aaPredicted RBP6.81□□□□□ -1.32
SRSF4-207ENST00000622143 ARHGEF15O94989 841 aa6.81□□□□□ -1.32
SRSF4-207ENST00000622143 HMGB2P26583 209 aaKnown RBP6.81□□□□□ -1.32
SRSF4-207ENST00000622143 FOXK2Q01167 660 aa6.81□□□□□ -1.32
SRSF4-207ENST00000622143 EAPPQ56P03 285 aaPredicted RBP6.81□□□□□ -1.32
SRSF4-207ENST00000622143 FOXR1Q6PIV2 292 aa6.81□□□□□ -1.32
SRSF4-207ENST00000622143 NIFKQ9BYG3 293 aaKnown RBP6.81□□□□□ -1.32
SRSF4-207ENST00000622143 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
SRSF4-207ENST00000622143 COL5A3P25940 1745 aaPredicted RBP6.81□□□□□ -1.32
SRSF4-207ENST00000622143 RTL1A6NKG5 1358 aa6.81□□□□□ -1.32
SRSF4-207ENST00000622143 CARMIL3Q8ND23 1372 aa6.81□□□□□ -1.32
SRSF4-207ENST00000622143 VIRMAQ69YN4 1812 aaKnown RBP6.8□□□□□ -1.32
SRSF4-207ENST00000622143 POLRMTO00411 1230 aaKnown RBP6.8□□□□□ -1.32
SRSF4-207ENST00000622143 PTCD1O75127 700 aaKnown RBP6.8□□□□□ -1.32
SRSF4-207ENST00000622143 RPS6KA4O75676 772 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 ATP2B4P23634 1241 aa6.8□□□□□ -1.32
SRSF4-207ENST00000622143 MSX1P28360 303 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms