RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 ARID5AQ03989 594 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 KRT71Q3SY84 523 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 CCDC14Q49A88 953 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 CCDC197Q8NCU1 140 aa15.37■□□□□ 0.05
CHD1-212ENST00000614616 GADD45BO75293 160 aaPredicted RBP15.36■□□□□ 0.05
CHD1-212ENST00000614616 CTNNA1P35221 906 aaKnown RBP15.36■□□□□ 0.05
CHD1-212ENST00000614616 HAUS1Q96CS2 278 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 DTNBP1Q96EV8 351 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 PPP1R2P41236 205 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 VWA3BQ502W6 1294 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 PDCD7Q8N8D1 485 aaKnown RBP15.36■□□□□ 0.05
CHD1-212ENST00000614616 ZC4H2Q9NQZ6 224 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 MORC2Q9Y6X9 1032 aaPredicted RBP15.36■□□□□ 0.05
CHD1-212ENST00000614616 SUN1O94901 812 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 HVCN1Q96D96 273 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 CCDC51Q96ER9 411 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 TXNDC16Q9P2K2 825 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 A0A1B0GVL5 298 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 USP5P45974 858 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 ETF1P62495 437 aaKnown RBP15.36■□□□□ 0.05
CHD1-212ENST00000614616 E2F5Q15329 346 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 TTF1Q15361 905 aaPredicted RBP15.36■□□□□ 0.05
CHD1-212ENST00000614616 TSHZ3Q63HK5 1081 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 HOMER3Q9NSC5 361 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 CXorf56Q9H5V9 222 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 AQRO60306 1485 aaKnown RBP eCLIP15.36■□□□□ 0.053e-7■■■■■ 27.6
CHD1-212ENST00000614616 GUCY2CP25092 1073 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 POLE2P56282 527 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 SLFNL1Q499Z3 407 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 SYCP3Q8IZU3 236 aa15.36■□□□□ 0.05
CHD1-212ENST00000614616 RNF8O76064 485 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 PNMA6AP0CW24 399 aaPredicted RBP15.35■□□□□ 0.05
CHD1-212ENST00000614616 PLEKHM2Q8IWE5 1019 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 USP6NLQ92738 828 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 IRAK4Q9NWZ3 460 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 CTNND2Q9UQB3 1225 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 BICDL1Q6ZP65 573 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 TRIM58Q8NG06 486 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 TMEM110-MUSTN1A8MSY1 372 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 SKIP12755 728 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 MTX1Q13505 466 aa15.35■□□□□ 0.05
CHD1-212ENST00000614616 KRI1Q8N9T8 703 aaKnown RBP15.35■□□□□ 0.05
CHD1-212ENST00000614616 CCDC97Q96F63 343 aaPredicted RBP15.35■□□□□ 0.05
CHD1-212ENST00000614616 PPP2R5EQ16537 467 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 LONRF2Q1L5Z9 754 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 SYCE1Q8N0S2 351 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 ATAD2BQ9ULI0 1458 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 IQCDQ96DY2 449 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 ANKRD20A3Q5VUR7 823 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 KAT6AQ92794 2004 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 TROVE2P10155 538 aaKnown RBP eCLIP15.34■□□□□ 0.05
CHD1-212ENST00000614616 TAF11Q15544 211 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 CCDC82Q8N4S0 544 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 ANKRD44Q8N8A2 993 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 FBXO41Q8TF61 875 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 ZNF692Q9BU19 519 aaPredicted RBP15.34■□□□□ 0.05
CHD1-212ENST00000614616 ZBTB43O43298 467 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 CLCN6P51797 869 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 CFAP70Q5T0N1 1121 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 TMEM132EQ6IEE7 984 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 TMTC2Q8N394 836 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 SPDL1Q96EA4 605 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 XAB2Q9HCS7 855 aaKnown RBP15.34■□□□□ 0.05
CHD1-212ENST00000614616 WWC3Q9ULE0 1092 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 MINDY4BA8MYZ0 360 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 DHX58Q96C10 678 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 MYH11P35749 1972 aa15.34■□□□□ 0.05
CHD1-212ENST00000614616 PPP1R21Q6ZMI0 780 aa15.33■□□□□ 0.05
CHD1-212ENST00000614616 SRGAP1Q7Z6B7 1085 aa15.33■□□□□ 0.05
CHD1-212ENST00000614616 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.33■□□□□ 0.05
CHD1-212ENST00000614616 MGEA5O60502 916 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 FCHSD1Q86WN1 690 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 MLKLQ8NB16 471 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 SCAF11Q99590 1463 aaKnown RBP15.33■□□□□ 0.04
CHD1-212ENST00000614616 ZNF202O95125 648 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 HHATQ5VTY9 493 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 LEO1Q8WVC0 666 aaPredicted RBP15.33■□□□□ 0.04
CHD1-212ENST00000614616 PPP2R2CQ9Y2T4 447 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 RANBP1P43487 201 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 TCP11Q8WWU5 503 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 NOP53Q9NZM5 478 aaKnown RBP15.33■□□□□ 0.04
CHD1-212ENST00000614616 HSPA1LP34931 641 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 MFSD6Q6ZSS7 791 aa15.33■□□□□ 0.04
CHD1-212ENST00000614616 TXLNGQ9NUQ3 528 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 KLF18A0A0U1RQI7 1052 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 NCBP1Q09161 790 aaKnown RBP15.32■□□□□ 0.04
CHD1-212ENST00000614616 LRMPQ12912 555 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 MCMDC2Q4G0Z9 681 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 XPO4Q9C0E2 1151 aaKnown RBP15.32■□□□□ 0.04
CHD1-212ENST00000614616 PSMD7P51665 324 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 CREB3L3Q68CJ9 461 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 CDK19Q9BWU1 502 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 SATB2Q9UPW6 733 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 HGSO14964 777 aaPredicted RBP15.32■□□□□ 0.04
CHD1-212ENST00000614616 LMNAP02545 664 aaKnown RBP15.32■□□□□ 0.04
CHD1-212ENST00000614616 SLC4A8Q2Y0W8 1093 aa15.32■□□□□ 0.04
CHD1-212ENST00000614616 USP37Q86T82 979 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms