RNA–Protein interactions for RNA: ENST00000594019.5

ZC3H4-202, Transcript of zinc finger CCCH-type containing 4, humanhuman

TSL 2

Gene ZC3H4, Length 3,259 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-202ENST00000594019 USP28Q96RU2 1077 aa13.19□□□□□ -0.3
ZC3H4-202ENST00000594019 NRBP1Q9UHY1 535 aa13.19□□□□□ -0.3
ZC3H4-202ENST00000594019 ABCC6O95255 1503 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 F8W031 263 aaPredicted RBP13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 NCOA7Q8NI08 942 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 CDC5LQ99459 802 aaKnown RBP13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 MRVI1Q9Y6F6 885 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 MROH5Q6ZUA9 1318 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 BIN1O00499 593 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 ZNF165P49910 485 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 LRMPQ12912 555 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 IFNL3Q8IZI9 196 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 CBX8Q9HC52 389 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 ORC3Q9UBD5 711 aaPredicted RBP13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 PYCARDQ9ULZ3 195 aa13.18□□□□□ -0.3
ZC3H4-202ENST00000594019 IFIT3O14879 490 aaKnown RBP13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 RANBP6O60518 1105 aaKnown RBP13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 MCM5P33992 734 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 GNL2Q13823 731 aaKnown RBP13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 NOLC1Q14978 699 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 PARP10Q53GL7 1025 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 HS1BP3Q53T59 392 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 STRBPQ96SI9 672 aaKnown RBP13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 SPEF2Q9C093 1822 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 ZNF500O60304 480 aaPredicted RBP13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 RPS8P62241 208 aaKnown RBP13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 RESTQ13127 1097 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 TMEM67Q5HYA8 995 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 TRAPPC3LQ5T215 181 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 CCDC186Q7Z3E2 898 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 FSIP1Q8NA03 581 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 LRP6O75581 1613 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 A0A1B0GVL5 298 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 BECN2A8MW95 431 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 RIMBP2O15034 1052 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 NMT2O60551 498 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 FGFR2P21802 821 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 MARCKSP29966 332 aaPredicted RBP13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 EXOSC10Q01780 885 aaKnown RBP13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 DIXDC1Q155Q3 683 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 FAM200AQ8TCP9 573 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 ZSWIM5Q9P217 1185 aa13.17□□□□□ -0.3
ZC3H4-202ENST00000594019 GOLGA6L19H0YKK7 550 aa13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 CYP2D6P10635 497 aa13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 CDC27P30260 824 aa13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 ZRSR1Q15695 479 aaKnown RBP13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 UVSSAQ2YD98 709 aa13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 CAVIN4Q5BKX8 364 aa13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 FILIP1Q7Z7B0 1213 aa13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 ZNF592Q92610 1267 aa13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 CTNNA3Q9UI47 895 aa13.16□□□□□ -0.3
ZC3H4-202ENST00000594019 KINO60870 393 aaKnown RBP13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 FDPSP14324 419 aaKnown RBP13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 STK38Q15208 465 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 GRIK5Q16478 980 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 SPECC1Q5M775 1068 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 TPTE2Q6XPS3 522 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 PAPPAQ13219 1627 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 JCADQ9P266 1359 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 ZFYP08048 801 aaPredicted RBP13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 UQCRFS1P1P0C7P4 283 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 LRRFIP1Q32MZ4 808 aaKnown RBP13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 CFAP45Q9UL16 551 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 TTF1Q15361 905 aaPredicted RBP13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 C8orf76Q96K31 380 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 FUCA2Q9BTY2 467 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 SLC26A6Q9BXS9 759 aa13.15□□□□□ -0.3
ZC3H4-202ENST00000594019 A0A0U1RQG5 324 aaPredicted RBP13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 GSG1L2A8MUP6 293 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 PFKFB2O60825 505 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 METAP2P50579 478 aaKnown RBP eCLIP13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 TERF1P54274 439 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 KCNJ14Q9UNX9 436 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 TCRBV5S4A2TA0A5A2 114 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 MB21D2Q8IYB1 491 aaPredicted RBP13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 CNBD1Q8NA66 436 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 GOLPH3LQ9H4A5 285 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 DDX19AQ9NUU7 478 aaKnown RBP13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 RPS6KA4O75676 772 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 HMGB1P09429 215 aaKnown RBP13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 ARID4AP29374 1257 aaPredicted RBP13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 GUCY1A2P33402 732 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 NAA16Q6N069 864 aaPredicted RBP13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 ZSCAN25Q6NSZ9 544 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 CLSTN2Q9H4D0 955 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 NARFQ9UHQ1 456 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 SAP30BPQ9UHR5 308 aaKnown RBP13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 KIF3AQ9Y496 699 aa13.14□□□□□ -0.31
ZC3H4-202ENST00000594019 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
ZC3H4-202ENST00000594019 SLURP2P0DP57 97 aa13.13□□□□□ -0.31
ZC3H4-202ENST00000594019 TSGA10IPQ3SY00 556 aa13.13□□□□□ -0.31
ZC3H4-202ENST00000594019 C11orf57Q6ZUT1 292 aaPredicted RBP13.13□□□□□ -0.31
ZC3H4-202ENST00000594019 C16orf45Q96MC5 204 aaPredicted RBP13.13□□□□□ -0.31
ZC3H4-202ENST00000594019 HPS5Q9UPZ3 1129 aa13.13□□□□□ -0.31
ZC3H4-202ENST00000594019 MAGEB6P1A0A0J9YX57 407 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms