RNA–Protein interactions for RNA: ENST00000590115.1

LDLRAD4-213, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-213ENST00000590115 LNPKQ9C0E8 428 aa7.51□□□□□ -1.21
LDLRAD4-213ENST00000590115 COA1Q9GZY4 146 aa7.51□□□□□ -1.21
LDLRAD4-213ENST00000590115 IL25Q9H293 177 aa7.51□□□□□ -1.21
LDLRAD4-213ENST00000590115 TRIM17Q9Y577 477 aa7.51□□□□□ -1.21
LDLRAD4-213ENST00000590115 MGAMO43451 1857 aa7.51□□□□□ -1.21
LDLRAD4-213ENST00000590115 PRUNE2Q8WUY3 3088 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 MYH13Q9UKX3 1938 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 RFX7Q2KHR2 1363 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 SOX1O00570 391 aaPredicted RBP7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 FOXP2O15409 715 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 PRDX5P30044 214 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 HIBADHP31937 336 aaKnown RBP7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 ZAP70P43403 619 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 FKBP1BP68106 108 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 GTF2IP78347 998 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 CHD1LQ86WJ1 897 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 LRRCC1Q9C099 1032 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 SNRKQ9NRH2 765 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 SCAF8Q9UPN6 1271 aaKnown RBP7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 PTPN22Q9Y2R2 807 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 SSC5DA1L4H1 1573 aa7.5□□□□□ -1.21
LDLRAD4-213ENST00000590115 TCRBV5S4A2TA0A5A2 114 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 UBE2Q2LH0YL09 131 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 HMMRO75330 724 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 SLC5A1P13866 664 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 ATP5JP18859 108 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 PDE1AP54750 535 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 ZNF280AP59817 542 aaPredicted RBP7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 EVX2Q03828 476 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 MKRN3Q13064 507 aaKnown RBP7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 RBM26Q5T8P6 1007 aaKnown RBP7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 ANKRD45Q5TZF3 282 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 RSBN1LQ6PCB5 846 aaPredicted RBP7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 PODNQ7Z5L7 613 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 SULF1Q8IWU6 871 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 ZNF333Q96JL9 665 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 ZC3H12CQ9C0D7 883 aaKnown RBP7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 OSBPL3Q9H4L5 887 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 HDAC5Q9UQL6 1122 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 SIPA1L1O43166 1804 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 CDH23Q9H251 3354 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 CDK5RAP2Q96SN8 1893 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 PDS5AQ29RF7 1337 aaKnown RBP7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 SALL1Q9NSC2 1324 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 DOCK3Q8IZD9 2030 aa7.49□□□□□ -1.21
LDLRAD4-213ENST00000590115 SMIM22K7EJ46 135 aa7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 IFIT1P09914 478 aaKnown RBP7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 SLURP2P0DP57 97 aa7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 RPS12P25398 132 aaKnown RBP7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 DDX60LQ5H9U9 1706 aaKnown RBP7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 STRIP1Q5VSL9 837 aa7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 ANGEL2Q5VTE6 544 aaKnown RBP7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 CDAN1Q8IWY9 1227 aa7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 NEUROD6Q96NK8 337 aa7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 EYA3Q99504 573 aa7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 HAUS7Q99871 368 aa7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 COL25A1Q9BXS0 654 aaPredicted RBP7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 RWDD1Q9H446 243 aaPredicted RBP7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 MAST2Q6P0Q8 1798 aa7.48□□□□□ -1.21
LDLRAD4-213ENST00000590115 LAMA2P24043 3122 aaKnown RBP7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 USP17L3A6NCW0 530 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 USP17L4A6NCW7 530 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 MAP4K4O95819 1239 aaPredicted RBP7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 RHBDL3P58872 404 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 FKBP1AP62942 108 aaKnown RBP7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 DIXDC1Q155Q3 683 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 PRAMEF18Q5VWM3 479 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 ERICH6BQ5W0A0 696 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 TTLL5Q6EMB2 1281 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 APOBEC3HQ6NTF7 200 aaKnown RBP7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 USP17L1Q7RTZ2 530 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 ERC1Q8IUD2 1116 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 SPATA5Q8NB90 893 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 NKX2-3Q8TAU0 364 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 CD99L2Q8TCZ2 262 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 NSUN4Q96CB9 384 aaKnown RBP7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 SHISA4Q96DD7 197 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 LRCH3Q96II8 777 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 BOLA2Q9H3K6 86 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 CHMP4BQ9H444 224 aaKnown RBP7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 PPP4R2Q9NY27 417 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 AKAP2Q9Y2D5 859 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 GAKO14976 1311 aa7.47□□□□□ -1.21
LDLRAD4-213ENST00000590115 IGF2BP3O00425 579 aaKnown RBP eCLIP7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 SREBF2Q12772 1141 aa7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 CHAF1AQ13111 956 aaPredicted RBP7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 OS9Q13438 667 aaPredicted RBP7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 NBPF9Q3BBW0 867 aa7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 HSP90AB4PQ58FF6 505 aa7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 CENPQQ7L2Z9 268 aaPredicted RBP7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 ZNF804AQ7Z570 1209 aa7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 CLASRPQ8N2M8 674 aaKnown RBP7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 PRMT6Q96LA8 375 aaPredicted RBP7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 ECHDC1Q9NTX5 307 aa7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 DAGLAQ9Y4D2 1042 aa7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 TACC3Q9Y6A5 838 aa7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 ATRNL1Q5VV63 1379 aa7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 RPAP1Q9BWH6 1393 aaPredicted RBP7.46□□□□□ -1.22
LDLRAD4-213ENST00000590115 MYH7P12883 1935 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms