RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	NSUN4	Q96CB9	384 aa	Known RBP	21.25	■□□□□ 0.99
MBD1-221	ENST00000589867	FOXN1	O15353	648 aa		21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	RAB11FIP3	O75154	756 aa		21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	USP2	O75604	605 aa	Predicted RBP	21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	MAP2K2	P36507	400 aa		21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	ZNF157	P51786	506 aa	Predicted RBP	21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	TNFAIP1	Q13829	316 aa		21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	ERICH6	Q7L0X2	663 aa		21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	FAM198A	Q9UFP1	575 aa		21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	NDUFB9	Q9Y6M9	179 aa		21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	OTOF	Q9HC10	1997 aa		21.24	■□□□□ 0.99
MBD1-221	ENST00000589867	NF2	P35240	595 aa		21.23	■□□□□ 0.99
MBD1-221	ENST00000589867	SPTY2D1	Q68D10	685 aa	Predicted RBP	21.23	■□□□□ 0.99
MBD1-221	ENST00000589867	FAM83A	Q86UY5	434 aa		21.23	■□□□□ 0.99
MBD1-221	ENST00000589867	PIH1D3	Q9NQM4	214 aa	Known RBP	21.23	■□□□□ 0.99
MBD1-221	ENST00000589867	ANGEL1	Q9UNK9	670 aa	Known RBP	21.23	■□□□□ 0.99
MBD1-221	ENST00000589867	RHBDL3	P58872	404 aa		21.22	■□□□□ 0.99
MBD1-221	ENST00000589867	DZIP1	Q86YF9	867 aa	Known RBP	21.22	■□□□□ 0.99
MBD1-221	ENST00000589867	ZFPM1	Q8IX07	1006 aa		21.22	■□□□□ 0.99
MBD1-221	ENST00000589867	CCDC102A	Q96A19	550 aa		21.22	■□□□□ 0.99
MBD1-221	ENST00000589867	DCTPP1	Q9H773	170 aa		21.22	■□□□□ 0.99
MBD1-221	ENST00000589867	MROH7-TTC4	A0A0A0MT08	1334 aa		21.22	■□□□□ 0.99
MBD1-221	ENST00000589867	DOCK2	Q92608	1830 aa		21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	GPR75-ASB3	A0A0A6YYF3	556 aa		21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	SMARCA5	O60264	1052 aa	Predicted RBP	21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	NOG	Q13253	232 aa		21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	TTLL12	Q14166	644 aa	Predicted RBP	21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	SUPT20HL1	Q3ZLR7	823 aa		21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	ARMC9	Q7Z3E5	817 aa		21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	CLMN	Q96JQ2	1002 aa		21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	ANTXR1	Q9H6X2	564 aa		21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	USP40	Q9NVE5	1235 aa		21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	RPAP1	Q9BWH6	1393 aa	Predicted RBP	21.21	■□□□□ 0.99
MBD1-221	ENST00000589867	MAST2	Q6P0Q8	1798 aa		21.2	■□□□□ 0.99
MBD1-221	ENST00000589867	WDHD1	O75717	1129 aa	Predicted RBP	21.2	■□□□□ 0.98
MBD1-221	ENST00000589867	KIF23	Q02241	960 aa	Predicted RBP	21.2	■□□□□ 0.98
MBD1-221	ENST00000589867	ADGRA1	Q86SQ6	560 aa		21.2	■□□□□ 0.98
MBD1-221	ENST00000589867	CLASRP	Q8N2M8	674 aa	Known RBP	21.2	■□□□□ 0.98
MBD1-221	ENST00000589867	BTD	P43251	543 aa		21.19	■□□□□ 0.98
MBD1-221	ENST00000589867	TNNI2	P48788	182 aa		21.19	■□□□□ 0.98
MBD1-221	ENST00000589867	MAP2K1	Q02750	393 aa	Predicted RBP	21.19	■□□□□ 0.98
MBD1-221	ENST00000589867	SH3BP5L	Q7L8J4	393 aa		21.19	■□□□□ 0.98
MBD1-221	ENST00000589867	FAM151A	Q8WW52	585 aa		21.19	■□□□□ 0.98
MBD1-221	ENST00000589867	IDI2	Q9BXS1	227 aa		21.19	■□□□□ 0.98
MBD1-221	ENST00000589867	DDX4	Q9NQI0	724 aa	Known RBP	21.19	■□□□□ 0.98
MBD1-221	ENST00000589867	RAI14	Q9P0K7	980 aa		21.19	■□□□□ 0.98
MBD1-221	ENST00000589867	TCP10	Q12799	353 aa		21.18	■□□□□ 0.98
MBD1-221	ENST00000589867	CSRNP1	Q96S65	589 aa		21.18	■□□□□ 0.98
MBD1-221	ENST00000589867	TMOD2	Q9NZR1	351 aa		21.18	■□□□□ 0.98
MBD1-221	ENST00000589867	LRP2BP	Q9P2M1	347 aa		21.18	■□□□□ 0.98
MBD1-221	ENST00000589867	ATRNL1	Q5VV63	1379 aa		21.18	■□□□□ 0.98
MBD1-221	ENST00000589867	PPP1R12B	O60237	982 aa	Predicted RBP	21.17	■□□□□ 0.98
MBD1-221	ENST00000589867	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	21.17	■□□□□ 0.98
MBD1-221	ENST00000589867	CDK5RAP2	Q96SN8	1893 aa		21.17	■□□□□ 0.98
MBD1-221	ENST00000589867	AK9	Q5TCS8	1911 aa		21.16	■□□□□ 0.98
MBD1-221	ENST00000589867	LAMB1	P07942	1786 aa		21.16	■□□□□ 0.98
MBD1-221	ENST00000589867	HSPA8	P11142	646 aa	Known RBP	21.16	■□□□□ 0.98
MBD1-221	ENST00000589867	GJA5	P36382	358 aa		21.16	■□□□□ 0.98
MBD1-221	ENST00000589867	RGS3	P49796	1198 aa		21.16	■□□□□ 0.98
MBD1-221	ENST00000589867	SLF2	Q8IX21	1173 aa		21.16	■□□□□ 0.98
MBD1-221	ENST00000589867	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	21.16	■□□□□ 0.98
MBD1-221	ENST00000589867	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	21.16	■□□□□ 0.98
MBD1-221	ENST00000589867	LRRCC1	Q9C099	1032 aa		21.16	■□□□□ 0.98
MBD1-221	ENST00000589867	IFIT2	P09913	472 aa	Known RBP	21.15	■□□□□ 0.98
MBD1-221	ENST00000589867	SLURP2	P0DP57	97 aa		21.15	■□□□□ 0.98
MBD1-221	ENST00000589867	SPRYD7	Q5W111	196 aa		21.15	■□□□□ 0.98
MBD1-221	ENST00000589867	LDHC	P07864	332 aa		21.14	■□□□□ 0.97
MBD1-221	ENST00000589867	GSTO1	P78417	241 aa		21.14	■□□□□ 0.97
MBD1-221	ENST00000589867	COL13A1	Q5TAT6	717 aa	Predicted RBP	21.14	■□□□□ 0.97
MBD1-221	ENST00000589867	NAA16	Q6N069	864 aa	Predicted RBP	21.14	■□□□□ 0.97
MBD1-221	ENST00000589867	EDC3	Q96F86	508 aa	Known RBP	21.14	■□□□□ 0.97
MBD1-221	ENST00000589867	SUPT16H	Q9Y5B9	1047 aa	Known RBP	21.14	■□□□□ 0.97
MBD1-221	ENST00000589867	DDTL	A6NHG4	134 aa	Predicted RBP	21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	UNCX	A6NJT0	531 aa		21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	ENTPD3	O75355	529 aa		21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	IREB2	P48200	963 aa	Known RBP	21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	PPP4C	P60510	307 aa		21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	MKRN3	Q13064	507 aa	Known RBP	21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	MIGA2	Q7L4E1	593 aa		21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	CNKSR2	Q8WXI2	1034 aa		21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	BCL11A	Q9H165	835 aa		21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	TSKS	Q9UJT2	592 aa		21.13	■□□□□ 0.97
MBD1-221	ENST00000589867	NPM3	O75607	178 aa	Known RBP	21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	ATP5J	P18859	108 aa		21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	CTCF	P49711	727 aa	Predicted RBP	21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	LBX1	P52954	281 aa		21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	VGLL4	Q14135	290 aa		21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	ANKRD13A	Q8IZ07	590 aa		21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	EXOC6	Q8TAG9	804 aa		21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	SLC10A4	Q96EP9	437 aa		21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	WNK4	Q96J92	1243 aa		21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	FOCAD	Q5VW36	1801 aa		21.12	■□□□□ 0.97
MBD1-221	ENST00000589867	IGSF3	O75054	1194 aa		21.11	■□□□□ 0.97
MBD1-221	ENST00000589867	IDH1	O75874	414 aa	Known RBP	21.11	■□□□□ 0.97
MBD1-221	ENST00000589867	MAP3K9	P80192	1104 aa		21.11	■□□□□ 0.97
MBD1-221	ENST00000589867	MAP3K10	Q02779	954 aa		21.11	■□□□□ 0.97
MBD1-221	ENST00000589867	AIDA	Q96BJ3	306 aa		21.11	■□□□□ 0.97
MBD1-221	ENST00000589867	BOLA2	Q9H3K6	86 aa		21.11	■□□□□ 0.97
MBD1-221	ENST00000589867	AATF	Q9NY61	560 aa	Known RBP eCLIP	21.11	■□□□□ 0.97

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