RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 NFIAQ12857 509 aa14.94□□□□□ -0.02
BRCA1-225ENST00000586385 PUM3Q15397 648 aaKnown RBP14.94□□□□□ -0.02
BRCA1-225ENST00000586385 ATG9AQ7Z3C6 839 aa14.94□□□□□ -0.02
BRCA1-225ENST00000586385 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.94□□□□□ -0.02
BRCA1-225ENST00000586385 SSH1Q8WYL5 1049 aa14.94□□□□□ -0.02
BRCA1-225ENST00000586385 KCNH4Q9UQ05 1017 aa14.94□□□□□ -0.02
BRCA1-225ENST00000586385 DAGLAQ9Y4D2 1042 aa14.94□□□□□ -0.02
BRCA1-225ENST00000586385 EYA2O00167 538 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 ANP32CO43423 234 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 ECM2O94769 699 aaPredicted RBP14.93□□□□□ -0.02
BRCA1-225ENST00000586385 PPATQ06203 517 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 MTFR1Q15390 333 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 DIXDC1Q155Q3 683 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 SLC4A8Q2Y0W8 1093 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 CDC42EP5Q6NZY7 148 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 NBPF11Q86T75 865 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 ZFPM1Q8IX07 1006 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 FAM9BQ8IZU0 186 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 TRIM47Q96LD4 638 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 ZNF341Q9BYN7 854 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 TMOD2Q9NZR1 351 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 FAM198AQ9UFP1 575 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 CPA4Q9UI42 421 aa14.93□□□□□ -0.02
BRCA1-225ENST00000586385 MAST3O60307 1309 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 H0YGN5 161 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 IFIT1P09914 478 aaKnown RBP14.92□□□□□ -0.02
BRCA1-225ENST00000586385 PRDX5P30044 214 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 TCP10Q12799 353 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 ARHGEF6Q15052 776 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 DCAF15Q66K64 600 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 ANKRD23Q86SG2 305 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 FAM151AQ8WW52 585 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 ATRNL1Q5VV63 1379 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 PTPRCP08575 1304 aa14.92□□□□□ -0.02
BRCA1-225ENST00000586385 PDHXO00330 501 aa14.91□□□□□ -0.02
BRCA1-225ENST00000586385 OSBPP22059 807 aa14.91□□□□□ -0.02
BRCA1-225ENST00000586385 GPAT2Q6NUI2 795 aa14.91□□□□□ -0.02
BRCA1-225ENST00000586385 SRRDQ9UH36 339 aa14.91□□□□□ -0.02
BRCA1-225ENST00000586385 GNRH1P01148 92 aa14.9□□□□□ -0.02
BRCA1-225ENST00000586385 SLURP2P0DP57 97 aa14.9□□□□□ -0.02
BRCA1-225ENST00000586385 PSMC4P43686 418 aa14.9□□□□□ -0.02
BRCA1-225ENST00000586385 NOL9Q5SY16 702 aaKnown RBP14.9□□□□□ -0.02
BRCA1-225ENST00000586385 UBE2Q1Q7Z7E8 422 aa14.9□□□□□ -0.02
BRCA1-225ENST00000586385 WDR66Q8TBY9 1149 aa14.9□□□□□ -0.02
BRCA1-225ENST00000586385 LPIN2Q92539 896 aa14.9□□□□□ -0.02
BRCA1-225ENST00000586385 HOOK2Q96ED9 719 aa14.9□□□□□ -0.02
BRCA1-225ENST00000586385 RFX7Q2KHR2 1363 aa14.89□□□□□ -0.03
BRCA1-225ENST00000586385 PHF20L1A8MW92 1017 aa14.89□□□□□ -0.03
BRCA1-225ENST00000586385 BCRP11274 1271 aa14.89□□□□□ -0.03
BRCA1-225ENST00000586385 SLC5A1P13866 664 aa14.89□□□□□ -0.03
BRCA1-225ENST00000586385 PRMT2P55345 433 aa14.89□□□□□ -0.03
BRCA1-225ENST00000586385 KIF22Q14807 665 aa14.89□□□□□ -0.03
BRCA1-225ENST00000586385 CEP290O15078 2479 aa14.88□□□□□ -0.03
BRCA1-225ENST00000586385 TRIOBPQ9H2D6 2365 aa14.88□□□□□ -0.03
BRCA1-225ENST00000586385 PHKA1P46020 1223 aa14.88□□□□□ -0.03
BRCA1-225ENST00000586385 SH3BP5LQ7L8J4 393 aa14.88□□□□□ -0.03
BRCA1-225ENST00000586385 SALL1Q9NSC2 1324 aa14.88□□□□□ -0.03
BRCA1-225ENST00000586385 WDHD1O75717 1129 aaPredicted RBP14.87□□□□□ -0.03
BRCA1-225ENST00000586385 CYP2C8P10632 490 aa14.87□□□□□ -0.03
BRCA1-225ENST00000586385 ATP2B3Q16720 1220 aa14.87□□□□□ -0.03
BRCA1-225ENST00000586385 SIL1Q9H173 461 aa14.87□□□□□ -0.03
BRCA1-225ENST00000586385 USP40Q9NVE5 1235 aa14.87□□□□□ -0.03
BRCA1-225ENST00000586385 CIAO1O76071 339 aa14.86□□□□□ -0.03
BRCA1-225ENST00000586385 ADORA1P30542 326 aa14.86□□□□□ -0.03
BRCA1-225ENST00000586385 GRK4P32298 578 aa14.86□□□□□ -0.03
BRCA1-225ENST00000586385 PRKCZQ05513 592 aa14.86□□□□□ -0.03
BRCA1-225ENST00000586385 SLFN5Q08AF3 891 aa14.86□□□□□ -0.03
BRCA1-225ENST00000586385 GABRQQ9UN88 632 aa14.86□□□□□ -0.03
BRCA1-225ENST00000586385 PA2G4Q9UQ80 394 aaKnown RBP14.86□□□□□ -0.03
BRCA1-225ENST00000586385 GAKO14976 1311 aa14.86□□□□□ -0.03
BRCA1-225ENST00000586385 MYPNQ86TC9 1320 aa14.86□□□□□ -0.03
BRCA1-225ENST00000586385 E9PSI1 815 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 CXCL11O14625 94 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 ZBTB22O15209 634 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 FMNL1O95466 1100 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-225ENST00000586385 LDHBP07195 334 aaKnown RBP14.85□□□□□ -0.03
BRCA1-225ENST00000586385 CCL5P13501 91 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 GJA8P48165 433 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 RGS3P49796 1198 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 MAP3K10Q02779 954 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 CDCA7LQ96GN5 454 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 IDI2Q9BXS1 227 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 PRO3102Q9H379 93 aa14.85□□□□□ -0.03
BRCA1-225ENST00000586385 DDX4Q9NQI0 724 aaKnown RBP14.85□□□□□ -0.03
BRCA1-225ENST00000586385 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.85□□□□□ -0.03
BRCA1-225ENST00000586385 A0A0G2JLL6 359 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-225ENST00000586385 DDTLA6NHG4 134 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-225ENST00000586385 GJB1P08034 283 aa14.84□□□□□ -0.03
BRCA1-225ENST00000586385 PTPRAP18433 802 aa14.84□□□□□ -0.03
BRCA1-225ENST00000586385 CHRDL2Q6WN34 429 aa14.84□□□□□ -0.03
BRCA1-225ENST00000586385 PRRT2Q7Z6L0 340 aaPredicted RBP14.84□□□□□ -0.03
BRCA1-225ENST00000586385 SCYL3Q8IZE3 742 aa14.84□□□□□ -0.03
BRCA1-225ENST00000586385 RAET1EQ8TD07 263 aa14.84□□□□□ -0.03
BRCA1-225ENST00000586385 ZNF384Q8TF68 577 aa14.84□□□□□ -0.03
BRCA1-225ENST00000586385 PARK7Q99497 189 aaKnown RBP14.84□□□□□ -0.03
BRCA1-225ENST00000586385 RBM27Q9P2N5 1060 aaKnown RBP14.84□□□□□ -0.03
BRCA1-225ENST00000586385 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
BRCA1-225ENST00000586385 AFG3L2Q9Y4W6 797 aa14.84□□□□□ -0.03
BRCA1-225ENST00000586385 ZHX2Q9Y6X8 837 aa14.84□□□□□ -0.03
BRCA1-225ENST00000586385 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms