RNA–Protein interactions for RNA: ENST00000584155.1

NUP85-225, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-225ENST00000584155 PPP1R26Q5T8A7 1209 aaPredicted RBP4.73□□□□□ -1.65
NUP85-225ENST00000584155 NBPF10Q6P3W6 841 aaKnown RBP4.73□□□□□ -1.65
NUP85-225ENST00000584155 FOXD4L3Q6VB84 417 aaPredicted RBP4.73□□□□□ -1.65
NUP85-225ENST00000584155 NBPF15Q8N660 670 aa4.73□□□□□ -1.65
NUP85-225ENST00000584155 CCDC136Q96JN2 1154 aa4.73□□□□□ -1.65
NUP85-225ENST00000584155 INSM2Q96T92 566 aaPredicted RBP4.73□□□□□ -1.65
NUP85-225ENST00000584155 BRIP1Q9BX63 1249 aa4.73□□□□□ -1.65
NUP85-225ENST00000584155 TAF1DQ9H5J8 278 aaPredicted RBP4.73□□□□□ -1.65
NUP85-225ENST00000584155 COL15A1P39059 1388 aa4.73□□□□□ -1.65
NUP85-225ENST00000584155 COL5A3P25940 1745 aaPredicted RBP4.72□□□□□ -1.65
NUP85-225ENST00000584155 TJP1Q07157 1748 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 AFDNP55196 1824 aaKnown RBP4.72□□□□□ -1.65
NUP85-225ENST00000584155 SLX4Q8IY92 1834 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 TRAF5O00463 557 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 TCERG1O14776 1098 aaKnown RBP4.72□□□□□ -1.65
NUP85-225ENST00000584155 OIP5O43482 229 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 MARCH6O60337 910 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 NDUFV2P19404 249 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 EPS15P42566 896 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 AGERQ15109 404 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 EAPPQ56P03 285 aaPredicted RBP4.72□□□□□ -1.65
NUP85-225ENST00000584155 CST9Q5W186 159 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 PRPF40BQ6NWY9 871 aaKnown RBP4.72□□□□□ -1.65
NUP85-225ENST00000584155 ZNF790Q6PG37 636 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 VASH1Q7L8A9 365 aaPredicted RBP4.72□□□□□ -1.65
NUP85-225ENST00000584155 SYNE4Q8N205 404 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 NGEFQ8N5V2 710 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 UBXN4Q92575 508 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 PCMTD1Q96MG8 357 aaPredicted RBP4.72□□□□□ -1.65
NUP85-225ENST00000584155 ZIC5Q96T25 663 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 GPCPD1Q9NPB8 672 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 KIF20BQ96Q89 1820 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 ARFGEF1Q9Y6D6 1849 aa4.72□□□□□ -1.65
NUP85-225ENST00000584155 PLEKHG2Q9H7P9 1386 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 SHTN1A0MZ66 631 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 MOXD2PA6NHM9 499 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 GPR25O00155 361 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 IRF6O14896 467 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 AOC2O75106 756 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 HSPA8P11142 646 aaKnown RBP4.71□□□□□ -1.66
NUP85-225ENST00000584155 TCF3P15923 654 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 DEFB115Q30KQ5 88 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 CYP4F22Q6NT55 531 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 MCM10Q7L590 875 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 SH3BP5LQ7L8J4 393 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 CNTROBQ8N137 903 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 SPIRE2Q8WWL2 714 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 AGBL1Q96MI9 1066 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 SETDB2Q96T68 719 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 GOLGA2P5Q9HBQ8 144 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 RNF123Q5XPI4 1314 aa4.71□□□□□ -1.66
NUP85-225ENST00000584155 CNTNAP1P78357 1384 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 KLRG2A4D1S0 409 aaPredicted RBP4.7□□□□□ -1.66
NUP85-225ENST00000584155 TMEM88BA6NKF7 163 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 C1QTNF9BB2RNN3 333 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 CFAP99D6REC4 459 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 FZD9O00144 591 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 U2SURPO15042 1029 aaKnown RBP4.7□□□□□ -1.66
NUP85-225ENST00000584155 TPD52L2O43399 206 aaKnown RBP4.7□□□□□ -1.66
NUP85-225ENST00000584155 DIAPH1O60610 1272 aaKnown RBP4.7□□□□□ -1.66
NUP85-225ENST00000584155 STARD3NLO95772 234 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 EPHX2P34913 555 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 PDE6BP35913 854 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 HIRAP54198 1017 aaPredicted RBP4.7□□□□□ -1.66
NUP85-225ENST00000584155 EIF4G2P78344 907 aaKnown RBP eCLIP4.7□□□□□ -1.66
NUP85-225ENST00000584155 GRM1Q13255 1194 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 STYK1Q6J9G0 422 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 CD163Q86VB7 1156 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 DZIP3Q86Y13 1208 aaKnown RBP4.7□□□□□ -1.66
NUP85-225ENST00000584155 MASTLQ96GX5 879 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 ABHD8Q96I13 439 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 GMCL1Q96IK5 515 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 DNAJC2Q99543 621 aaKnown RBP4.7□□□□□ -1.66
NUP85-225ENST00000584155 TAOK3Q9H2K8 898 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 PGPEP1Q9NXJ5 209 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 MKL2Q9ULH7 1088 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 KNSTRNQ9Y448 316 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 PPME1Q9Y570 386 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 IVNS1ABPQ9Y6Y0 642 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 CACNA1SQ13698 1873 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 ANKRD31Q8N7Z5 1873 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 COL4A5P29400 1685 aa4.7□□□□□ -1.66
NUP85-225ENST00000584155 WDR33Q9C0J8 1336 aaKnown RBP4.7□□□□□ -1.66
NUP85-225ENST00000584155 NRXN2Q9P2S2 1712 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 ANKRD26Q9UPS8 1709 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 HEG1Q9ULI3 1381 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 CCDC85CA6NKD9 419 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 GNAT3A8MTJ3 354 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 SHISA8B8ZZ34 492 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 HOXB4P17483 251 aaPredicted RBP4.69□□□□□ -1.66
NUP85-225ENST00000584155 ERCC3P19447 782 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 MCCP23508 829 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 CLCN1P35523 988 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 IL6STP40189 918 aaPredicted RBP4.69□□□□□ -1.66
NUP85-225ENST00000584155 CTCFP49711 727 aaPredicted RBP4.69□□□□□ -1.66
NUP85-225ENST00000584155 SF3A1Q15459 793 aaKnown RBP4.69□□□□□ -1.66
NUP85-225ENST00000584155 SUSD4Q5VX71 490 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 TTLL7Q6ZT98 887 aa4.69□□□□□ -1.66
NUP85-225ENST00000584155 LDHDQ86WU2 507 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms