RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 ANGEL1Q9UNK9 670 aaKnown RBP12.19□□□□□ -0.46
SKA2-208ENST00000583927 DAGLAQ9Y4D2 1042 aa12.19□□□□□ -0.46
SKA2-208ENST00000583927 FPGT-TNNI3KV9GXZ4 949 aa12.19□□□□□ -0.46
SKA2-208ENST00000583927 USP2O75604 605 aaPredicted RBP12.18□□□□□ -0.46
SKA2-208ENST00000583927 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
SKA2-208ENST00000583927 INHBEP58166 350 aa12.18□□□□□ -0.46
SKA2-208ENST00000583927 HSP90AB4PQ58FF6 505 aa12.18□□□□□ -0.46
SKA2-208ENST00000583927 ERC1Q8IUD2 1116 aa12.18□□□□□ -0.46
SKA2-208ENST00000583927 ANKRD13AQ8IZ07 590 aa12.18□□□□□ -0.46
SKA2-208ENST00000583927 HMG20BQ9P0W2 317 aa12.18□□□□□ -0.46
SKA2-208ENST00000583927 TCP10L2B9ZVM9 353 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 MCAMP43121 646 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 OS9Q13438 667 aaPredicted RBP12.17□□□□□ -0.46
SKA2-208ENST00000583927 DIXDC1Q155Q3 683 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
SKA2-208ENST00000583927 GORABQ5T7V8 394 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 SPRYD7Q5W111 196 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 SPATA5Q8NB90 893 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 FAM151AQ8WW52 585 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 CFHR5Q9BXR6 569 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 IDI2Q9BXS1 227 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 TMEM39BQ9GZU3 492 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 COG6Q9Y2V7 657 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 MYH7P12883 1935 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 RFX7Q2KHR2 1363 aa12.17□□□□□ -0.46
SKA2-208ENST00000583927 PTPRFP10586 1907 aa12.16□□□□□ -0.46
SKA2-208ENST00000583927 HMMRO75330 724 aa12.16□□□□□ -0.46
SKA2-208ENST00000583927 NPM3O75607 178 aaKnown RBP12.16□□□□□ -0.46
SKA2-208ENST00000583927 SREBF2Q12772 1141 aa12.16□□□□□ -0.46
SKA2-208ENST00000583927 CCDC158Q5M9N0 1113 aa12.16□□□□□ -0.46
SKA2-208ENST00000583927 CDC42EP5Q6NZY7 148 aa12.16□□□□□ -0.46
SKA2-208ENST00000583927 ERICH6Q7L0X2 663 aa12.16□□□□□ -0.46
SKA2-208ENST00000583927 TNS4Q8IZW8 715 aa12.16□□□□□ -0.46
SKA2-208ENST00000583927 RNF186Q9NXI6 227 aa12.16□□□□□ -0.46
SKA2-208ENST00000583927 MROH7-TTC4A0A0A0MT08 1334 aa12.15□□□□□ -0.46
SKA2-208ENST00000583927 GPR75-ASB3A0A0A6YYF3 556 aa12.15□□□□□ -0.46
SKA2-208ENST00000583927 MANSC4A6NHS7 340 aaPredicted RBP12.15□□□□□ -0.46
SKA2-208ENST00000583927 GSTO1P78417 241 aa12.15□□□□□ -0.46
SKA2-208ENST00000583927 PRKG1Q13976 671 aa12.15□□□□□ -0.46
SKA2-208ENST00000583927 DCAF15Q66K64 600 aa12.15□□□□□ -0.46
SKA2-208ENST00000583927 TMED8Q6PL24 325 aaPredicted RBP12.15□□□□□ -0.46
SKA2-208ENST00000583927 DZIP1Q86YF9 867 aaKnown RBP12.15□□□□□ -0.46
SKA2-208ENST00000583927 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.15□□□□□ -0.46
SKA2-208ENST00000583927 NSUN4Q96CB9 384 aaKnown RBP12.15□□□□□ -0.46
SKA2-208ENST00000583927 WNK4Q96J92 1243 aa12.15□□□□□ -0.46
SKA2-208ENST00000583927 ABCF2Q9UG63 623 aa12.15□□□□□ -0.46
SKA2-208ENST00000583927 PHIPQ8WWQ0 1821 aa12.15□□□□□ -0.46
SKA2-208ENST00000583927 MYH1P12882 1939 aa12.15□□□□□ -0.46
SKA2-208ENST00000583927 COL2A1P02458 1487 aaPredicted RBP12.14□□□□□ -0.47
SKA2-208ENST00000583927 ATAD5Q96QE3 1844 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 ENTPD3O75355 529 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 ALDH1A1P00352 501 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 LDHCP07864 332 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 CACNB3P54284 484 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 MECOMQ03112 1051 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 TTC39AQ5SRH9 613 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.14□□□□□ -0.47
SKA2-208ENST00000583927 CDAN1Q8IWY9 1227 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 SIRT2Q8IXJ6 389 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 ZNF384Q8TF68 577 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 EAF2Q96CJ1 260 aaPredicted RBP12.14□□□□□ -0.47
SKA2-208ENST00000583927 CLMNQ96JQ2 1002 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 DBNDD2Q9BQY9 259 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 USP40Q9NVE5 1235 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 FAM198AQ9UFP1 575 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 DBNLQ9UJU6 430 aaKnown RBP12.14□□□□□ -0.47
SKA2-208ENST00000583927 FZD1Q9UP38 647 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 DOCK1Q14185 1865 aa12.14□□□□□ -0.47
SKA2-208ENST00000583927 TESPA1A2RU30 521 aaPredicted RBP12.13□□□□□ -0.47
SKA2-208ENST00000583927 RAB11FIP3O75154 756 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 TRPA1O75762 1119 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 MAP3K9P80192 1104 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 MAP3K10Q02779 954 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 NFIAQ12857 509 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 PI16Q6UXB8 463 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 RHPN1Q8TCX5 695 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 KIF1BPQ96EK5 621 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 ZNF112Q9UJU3 913 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 EXOC6BQ9Y2D4 811 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 CENPFP49454 3210 aa12.13□□□□□ -0.47
SKA2-208ENST00000583927 HTTP42858 3142 aa12.12□□□□□ -0.47
SKA2-208ENST00000583927 SIPA1L1O43166 1804 aa12.12□□□□□ -0.47
SKA2-208ENST00000583927 WDHD1O75717 1129 aaPredicted RBP12.12□□□□□ -0.47
SKA2-208ENST00000583927 CYP2E1P05181 493 aaPredicted RBP12.12□□□□□ -0.47
SKA2-208ENST00000583927 RHBDL3P58872 404 aa12.12□□□□□ -0.47
SKA2-208ENST00000583927 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
SKA2-208ENST00000583927 ZNF341Q9BYN7 854 aa12.12□□□□□ -0.47
SKA2-208ENST00000583927 CSADQ9Y600 493 aa12.12□□□□□ -0.47
SKA2-208ENST00000583927 ATRNL1Q5VV63 1379 aa12.12□□□□□ -0.47
SKA2-208ENST00000583927 GJA5P36382 358 aa12.11□□□□□ -0.47
SKA2-208ENST00000583927 BTDP43251 543 aa12.11□□□□□ -0.47
SKA2-208ENST00000583927 PPP4CP60510 307 aa12.11□□□□□ -0.47
SKA2-208ENST00000583927 VGLL4Q14135 290 aa12.11□□□□□ -0.47
SKA2-208ENST00000583927 TBC1D9Q6ZT07 1266 aa12.11□□□□□ -0.47
SKA2-208ENST00000583927 CLASRPQ8N2M8 674 aaKnown RBP12.11□□□□□ -0.47
SKA2-208ENST00000583927 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.11□□□□□ -0.47
SKA2-208ENST00000583927 OPTNQ96CV9 577 aa12.11□□□□□ -0.47
SKA2-208ENST00000583927 LRP2BPQ9P2M1 347 aa12.11□□□□□ -0.47
SKA2-208ENST00000583927 TSKSQ9UJT2 592 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms