RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 BCL11AQ9H165 835 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 IL1RAPL2Q9NP60 686 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 PRDM10Q9NQV6 1147 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 RNF186Q9NXI6 227 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 FAM198AQ9UFP1 575 aa15.5■□□□□ 0.07
CBX1-206ENST00000581003 RFX7Q2KHR2 1363 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 GAKO14976 1311 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 PDS5AQ29RF7 1337 aaKnown RBP15.49■□□□□ 0.07
CBX1-206ENST00000581003 CAPN15O75808 1086 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 SUPT20HL1Q3ZLR7 823 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 SPRYD7Q5W111 196 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 DZIP1Q86YF9 867 aaKnown RBP15.49■□□□□ 0.07
CBX1-206ENST00000581003 MRIQ9BWK5 157 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 ELP3Q9H9T3 547 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 GPR108Q9NPR9 543 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 USP40Q9NVE5 1235 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 DDX19BQ9UMR2 479 aa15.49■□□□□ 0.07
CBX1-206ENST00000581003 ZBTB22O15209 634 aa15.48■□□□□ 0.07
CBX1-206ENST00000581003 PPP1R12BO60237 982 aaPredicted RBP15.48■□□□□ 0.07
CBX1-206ENST00000581003 TNNI2P48788 182 aa15.48■□□□□ 0.07
CBX1-206ENST00000581003 TTC39AQ5SRH9 613 aa15.48■□□□□ 0.07
CBX1-206ENST00000581003 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.48■□□□□ 0.07
CBX1-206ENST00000581003 MROH7-TTC4A0A0A0MT08 1334 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 MS4A1P11836 297 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 BTDP43251 543 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 ZAP70P43403 619 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 VGLL4Q14135 290 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 MIGA2Q7L4E1 593 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 WNK4Q96J92 1243 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 R3HDMLQ9H3Y0 253 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 DDX4Q9NQI0 724 aaKnown RBP15.47■□□□□ 0.07
CBX1-206ENST00000581003 PIH1D3Q9NQM4 214 aaKnown RBP15.47■□□□□ 0.07
CBX1-206ENST00000581003 TMOD2Q9NZR1 351 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 AKAP11Q9UKA4 1901 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 MYH2Q9UKX2 1941 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 MAST2Q6P0Q8 1798 aa15.47■□□□□ 0.07
CBX1-206ENST00000581003 CYP2E1P05181 493 aaPredicted RBP15.46■□□□□ 0.07
CBX1-206ENST00000581003 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.07
CBX1-206ENST00000581003 ERICH6Q7L0X2 663 aa15.46■□□□□ 0.07
CBX1-206ENST00000581003 SH3BP5LQ7L8J4 393 aa15.46■□□□□ 0.07
CBX1-206ENST00000581003 ADGRA1Q86SQ6 560 aa15.46■□□□□ 0.07
CBX1-206ENST00000581003 FAM83AQ86UY5 434 aa15.46■□□□□ 0.07
CBX1-206ENST00000581003 AACSQ86V21 672 aa15.46■□□□□ 0.07
CBX1-206ENST00000581003 ZGPATQ8N5A5 531 aaKnown RBP15.46■□□□□ 0.07
CBX1-206ENST00000581003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.46■□□□□ 0.07
CBX1-206ENST00000581003 RHPN1Q8TCX5 695 aa15.46■□□□□ 0.07
CBX1-206ENST00000581003 ZKSCAN4Q969J2 545 aaPredicted RBP15.46■□□□□ 0.07
CBX1-206ENST00000581003 NSUN4Q96CB9 384 aaKnown RBP15.46■□□□□ 0.07
CBX1-206ENST00000581003 SLC10A4Q96EP9 437 aa15.46■□□□□ 0.07
CBX1-206ENST00000581003 RAI14Q9P0K7 980 aa15.46■□□□□ 0.07
CBX1-206ENST00000581003 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.07
CBX1-206ENST00000581003 WDHD1O75717 1129 aaPredicted RBP15.45■□□□□ 0.06
CBX1-206ENST00000581003 TBC1D8O95759 1140 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 UQCRFS1P1P0C7P4 283 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 RGS3P49796 1198 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 RHBDL3P58872 404 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 PICALMQ13492 652 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 PDE3AQ14432 1141 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 FKBP1CQ5VVH2 108 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 FAM151AQ8WW52 585 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 OPTNQ96CV9 577 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 ANTXR1Q9H6X2 564 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 SNCAIPQ9Y6H5 919 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 ATRNL1Q5VV63 1379 aa15.45■□□□□ 0.06
CBX1-206ENST00000581003 MYO5AQ9Y4I1 1855 aaKnown RBP15.44■□□□□ 0.06
CBX1-206ENST00000581003 IGF2BP3O00425 579 aaKnown RBP eCLIP15.44■□□□□ 0.06
CBX1-206ENST00000581003 CA12O43570 354 aa15.44■□□□□ 0.06
CBX1-206ENST00000581003 ANKRD13AQ8IZ07 590 aa15.44■□□□□ 0.06
CBX1-206ENST00000581003 WRNIP1Q96S55 665 aa15.44■□□□□ 0.06
CBX1-206ENST00000581003 GPR75-ASB3A0A0A6YYF3 556 aa15.43■□□□□ 0.06
CBX1-206ENST00000581003 INPP5BP32019 993 aa15.43■□□□□ 0.06
CBX1-206ENST00000581003 RRP1P56182 461 aaKnown RBP15.43■□□□□ 0.06
CBX1-206ENST00000581003 CCDC158Q5M9N0 1113 aa15.43■□□□□ 0.06
CBX1-206ENST00000581003 SPTY2D1Q68D10 685 aaPredicted RBP15.43■□□□□ 0.06
CBX1-206ENST00000581003 RPAP2Q8IXW5 612 aaPredicted RBP15.43■□□□□ 0.06
CBX1-206ENST00000581003 OTUD5Q96G74 571 aa15.43■□□□□ 0.06
CBX1-206ENST00000581003 SAGE1Q9NXZ1 904 aa15.43■□□□□ 0.06
CBX1-206ENST00000581003 LRP2BPQ9P2M1 347 aa15.43■□□□□ 0.06
CBX1-206ENST00000581003 LAMB1P07942 1786 aa15.43■□□□□ 0.06
CBX1-206ENST00000581003 DOCK2Q92608 1830 aa15.43■□□□□ 0.06
CBX1-206ENST00000581003 DDTLA6NHG4 134 aaPredicted RBP15.42■□□□□ 0.06
CBX1-206ENST00000581003 FAM196BA6NMK8 535 aa15.42■□□□□ 0.06
CBX1-206ENST00000581003 SMARCA5O60264 1052 aaPredicted RBP15.42■□□□□ 0.06
CBX1-206ENST00000581003 TM4SF4P48230 202 aa15.42■□□□□ 0.06
CBX1-206ENST00000581003 MAP3K9P80192 1104 aa15.42■□□□□ 0.06
CBX1-206ENST00000581003 SH3RF3Q8TEJ3 882 aaPredicted RBP15.42■□□□□ 0.06
CBX1-206ENST00000581003 FAM163AQ96GL9 167 aaPredicted RBP15.42■□□□□ 0.06
CBX1-206ENST00000581003 PTPN18Q99952 460 aa15.42■□□□□ 0.06
CBX1-206ENST00000581003 CASP8AP2Q9UKL3 1982 aa15.42■□□□□ 0.06
CBX1-206ENST00000581003 ZBTB48P10074 688 aaPredicted RBP15.41■□□□□ 0.06
CBX1-206ENST00000581003 ERC1Q8IUD2 1116 aa15.41■□□□□ 0.06
CBX1-206ENST00000581003 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.41■□□□□ 0.06
CBX1-206ENST00000581003 EDC3Q96F86 508 aaKnown RBP15.41■□□□□ 0.06
CBX1-206ENST00000581003 ZNF512BQ96KM6 892 aaPredicted RBP15.41■□□□□ 0.06
CBX1-206ENST00000581003 IDI2Q9BXS1 227 aa15.41■□□□□ 0.06
CBX1-206ENST00000581003 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.41■□□□□ 0.06
CBX1-206ENST00000581003 DYNLL1P63167 89 aaKnown RBP15.4■□□□□ 0.06
CBX1-206ENST00000581003 SREBF2Q12772 1141 aa15.4■□□□□ 0.06
CBX1-206ENST00000581003 IFNL1Q8IU54 200 aa15.4■□□□□ 0.06
CBX1-206ENST00000581003 AATFQ9NY61 560 aaKnown RBP eCLIP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms