RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 RFX5P48382 616 aaPredicted RBP4.82□□□□□ -1.64
NUP85-209ENST00000578987 TNNI2P48788 182 aa4.82□□□□□ -1.64
NUP85-209ENST00000578987 RABL6Q3YEC7 729 aaPredicted RBP4.82□□□□□ -1.64
NUP85-209ENST00000578987 PRPF38BQ5VTL8 546 aaKnown RBP4.82□□□□□ -1.64
NUP85-209ENST00000578987 APOBEC3HQ6NTF7 200 aaKnown RBP4.82□□□□□ -1.64
NUP85-209ENST00000578987 ZFPM1Q8IX07 1006 aa4.82□□□□□ -1.64
NUP85-209ENST00000578987 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.82□□□□□ -1.64
NUP85-209ENST00000578987 SH3TC2Q8TF17 1288 aa4.82□□□□□ -1.64
NUP85-209ENST00000578987 TEKT1Q969V4 418 aa4.82□□□□□ -1.64
NUP85-209ENST00000578987 WRNIP1Q96S55 665 aa4.82□□□□□ -1.64
NUP85-209ENST00000578987 ZFYVE28Q9HCC9 887 aa4.82□□□□□ -1.64
NUP85-209ENST00000578987 PA2G4Q9UQ80 394 aaKnown RBP4.82□□□□□ -1.64
NUP85-209ENST00000578987 CSADQ9Y600 493 aa4.82□□□□□ -1.64
NUP85-209ENST00000578987 PTCH2Q9Y6C5 1203 aa4.82□□□□□ -1.64
NUP85-209ENST00000578987 CENPFP49454 3210 aa4.82□□□□□ -1.64
NUP85-209ENST00000578987 DOCK2Q92608 1830 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 BTBD19C9JJ37 291 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 EYA2O00167 538 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 IFIT1P09914 478 aaKnown RBP4.81□□□□□ -1.64
NUP85-209ENST00000578987 CTGFP29279 349 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 PRDX5P30044 214 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 GTF2A2P52657 109 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 TIMM10P62072 90 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 SLFN5Q08AF3 891 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 TNFAIP1Q13829 316 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 DIXDC1Q155Q3 683 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 SLC4A8Q2Y0W8 1093 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 CDC42EP5Q6NZY7 148 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 ATG9AQ7Z3C6 839 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.81□□□□□ -1.64
NUP85-209ENST00000578987 TBC1D22AQ8WUA7 517 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 ZDHHC15Q96MV8 337 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 TMEM106CQ9BVX2 250 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 USP40Q9NVE5 1235 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 CPA4Q9UI42 421 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 NOB1Q9ULX3 412 aaKnown RBP4.81□□□□□ -1.64
NUP85-209ENST00000578987 SNCAIPQ9Y6H5 919 aa4.81□□□□□ -1.64
NUP85-209ENST00000578987 PTPRCP08575 1304 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 ZNF521Q96K83 1311 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 SPDYE5A6NIY4 337 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 UNCXA6NJT0 531 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 TLR2O60603 784 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 CETPP11597 493 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 SLC5A1P13866 664 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 ADORA1P30542 326 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 PHKA1P46020 1223 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 HDLBPQ00341 1268 aaKnown RBP4.8□□□□□ -1.64
NUP85-209ENST00000578987 NFIAQ12857 509 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 MTFR1Q15390 333 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 PUM3Q15397 648 aaKnown RBP4.8□□□□□ -1.64
NUP85-209ENST00000578987 SLC9C1Q4G0N8 1177 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 DIEXFQ68CQ4 756 aaKnown RBP4.8□□□□□ -1.64
NUP85-209ENST00000578987 INTS3Q68E01 1043 aaKnown RBP4.8□□□□□ -1.64
NUP85-209ENST00000578987 HHIPL2Q6UWX4 724 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 NBPF11Q86T75 865 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 ERO1BQ86YB8 467 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 FAM151AQ8WW52 585 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 LPIN2Q92539 896 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 MRIQ9BWK5 157 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 ZNF341Q9BYN7 854 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 SMC4Q9NTJ3 1288 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 TMOD2Q9NZR1 351 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.8□□□□□ -1.64
NUP85-209ENST00000578987 FAM198AQ9UFP1 575 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 TNNQ9UQP3 1299 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 DAGLAQ9Y4D2 1042 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 LRRFIP2Q9Y608 721 aaKnown RBP4.8□□□□□ -1.64
NUP85-209ENST00000578987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.8□□□□□ -1.64
NUP85-209ENST00000578987 MYH1P12882 1939 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 ALPK3Q96L96 1907 aa4.8□□□□□ -1.64
NUP85-209ENST00000578987 DOCK1Q14185 1865 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 E9PSI1 815 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 PDHXO00330 501 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 FMNL1O95466 1100 aaPredicted RBP4.79□□□□□ -1.64
NUP85-209ENST00000578987 LDHBP07195 334 aaKnown RBP4.79□□□□□ -1.64
NUP85-209ENST00000578987 UBTFL1P0CB47 393 aaPredicted RBP4.79□□□□□ -1.64
NUP85-209ENST00000578987 CYP2C8P10632 490 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 PSMC4P43686 418 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 LACTBP83111 547 aaPredicted RBP4.79□□□□□ -1.64
NUP85-209ENST00000578987 PPIL2Q13356 520 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 SNAPC2Q13487 334 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 MOGSQ13724 837 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 KIF22Q14807 665 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 ATP2B3Q16720 1220 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 HABP4Q5JVS0 413 aaKnown RBP4.79□□□□□ -1.64
NUP85-209ENST00000578987 DCAF15Q66K64 600 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 GADL1Q6ZQY3 521 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 CCDC84Q86UT8 332 aaPredicted RBP4.79□□□□□ -1.64
NUP85-209ENST00000578987 FAM83AQ86UY5 434 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 ZSCAN29Q8IWY8 852 aaPredicted RBP4.79□□□□□ -1.64
NUP85-209ENST00000578987 WDR66Q8TBY9 1149 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 ARMC5Q96C12 935 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 ZNF333Q96JL9 665 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 TRIM47Q96LD4 638 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 MEIS3Q99687 375 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 CEP126Q9P2H0 1117 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 ABCF2Q9UG63 623 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 ZNF112Q9UJU3 913 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 GABRQQ9UN88 632 aa4.79□□□□□ -1.64
NUP85-209ENST00000578987 COLQQ9Y215 455 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms