RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 ALG1LQ6GMV1 187 aa6.93□□□□□ -1.3
PRPF8-211ENST00000574728 NCAPG2Q86XI2 1143 aa6.93□□□□□ -1.3
PRPF8-211ENST00000574728 ELOA3Q8NG57 546 aa6.93□□□□□ -1.3
PRPF8-211ENST00000574728 ACDQ96AP0 544 aa6.93□□□□□ -1.3
PRPF8-211ENST00000574728 SPACA7Q96KW9 195 aa6.93□□□□□ -1.3
PRPF8-211ENST00000574728 NSUN5Q96P11 429 aaKnown RBP6.93□□□□□ -1.3
PRPF8-211ENST00000574728 ADGRL3Q9HAR2 1447 aa6.93□□□□□ -1.3
PRPF8-211ENST00000574728 LOC102724428A0A0B4J2F2 783 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 GHRHP01286 108 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 LDHBP07195 334 aaKnown RBP6.92□□□□□ -1.3
PRPF8-211ENST00000574728 EDN3P14138 238 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 SIK1P57059 783 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 PIP4K2BP78356 416 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 MLLT1Q03111 559 aaPredicted RBP6.92□□□□□ -1.3
PRPF8-211ENST00000574728 USPL1Q5W0Q7 1092 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 TMEM132EQ6IEE7 984 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 FBXO33Q7Z6M2 555 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 FBF1Q8TES7 1133 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 RBSNQ9H1K0 784 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 C19orf44Q9H6X5 657 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 SALL4Q9UJQ4 1053 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 SLC6A14Q9UN76 642 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 PLEKHH1Q9ULM0 1364 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 DCCP43146 1447 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 MST1RQ04912 1400 aa6.92□□□□□ -1.3
PRPF8-211ENST00000574728 ZBTB42B2RXF5 422 aa6.91□□□□□ -1.3
PRPF8-211ENST00000574728 KIF4AO95239 1232 aa6.91□□□□□ -1.3
PRPF8-211ENST00000574728 POLR3DP05423 398 aaPredicted RBP6.91□□□□□ -1.3
PRPF8-211ENST00000574728 BCRP11274 1271 aa6.91□□□□□ -1.3
PRPF8-211ENST00000574728 EPXP11678 715 aa6.91□□□□□ -1.3
PRPF8-211ENST00000574728 LCE2AQ5TA79 106 aaPredicted RBP6.91□□□□□ -1.3
PRPF8-211ENST00000574728 GALNT12Q8IXK2 581 aa6.91□□□□□ -1.3
PRPF8-211ENST00000574728 FOXD4L4Q8WXT5 416 aaPredicted RBP6.91□□□□□ -1.3
PRPF8-211ENST00000574728 CCDC74AQ96AQ1 378 aa6.91□□□□□ -1.3
PRPF8-211ENST00000574728 MDFIQ99750 246 aa6.91□□□□□ -1.3
PRPF8-211ENST00000574728 LRRC4BQ9NT99 713 aa6.91□□□□□ -1.3
PRPF8-211ENST00000574728 MSH6P52701 1360 aa6.91□□□□□ -1.3
PRPF8-211ENST00000574728 YTHDC2Q9H6S0 1430 aaKnown RBP6.91□□□□□ -1.3
PRPF8-211ENST00000574728 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.9□□□□□ -1.3
PRPF8-211ENST00000574728 OIP5O43482 229 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 PRPF40AO75400 957 aaKnown RBP6.9□□□□□ -1.3
PRPF8-211ENST00000574728 COL13A1Q5TAT6 717 aaPredicted RBP6.9□□□□□ -1.3
PRPF8-211ENST00000574728 HFE2Q6ZVN8 426 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 FAM35AQ86V20 835 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 GALNT6Q8NCL4 622 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 GIPC2Q8TF65 315 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 EDARADDQ8WWZ3 215 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 SIN3AQ96ST3 1273 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 BCL11AQ9H165 835 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 NPHS2Q9NP85 383 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 NLRP2Q9NX02 1062 aa6.9□□□□□ -1.3
PRPF8-211ENST00000574728 NALCNQ8IZF0 1738 aa6.9□□□□□ -1.31
PRPF8-211ENST00000574728 J3QW42 95 aa6.89□□□□□ -1.31
PRPF8-211ENST00000574728 CELA2BP08218 269 aaPredicted RBP6.89□□□□□ -1.31
PRPF8-211ENST00000574728 CPB1P15086 417 aa6.89□□□□□ -1.31
PRPF8-211ENST00000574728 EIF2AK2P19525 551 aaKnown RBP6.89□□□□□ -1.31
PRPF8-211ENST00000574728 MAP3K10Q02779 954 aa6.89□□□□□ -1.31
PRPF8-211ENST00000574728 BRINP3Q76B58 766 aa6.89□□□□□ -1.31
PRPF8-211ENST00000574728 WAPLQ7Z5K2 1190 aa6.89□□□□□ -1.31
PRPF8-211ENST00000574728 CEP120Q8N960 986 aa6.89□□□□□ -1.31
PRPF8-211ENST00000574728 WWC3Q9ULE0 1092 aa6.89□□□□□ -1.31
PRPF8-211ENST00000574728 ROBO1Q9Y6N7 1651 aa6.89□□□□□ -1.31
PRPF8-211ENST00000574728 C1orf167Q5SNV9 1468 aa6.88□□□□□ -1.31
PRPF8-211ENST00000574728 RBM47A0AV96 593 aaKnown RBP6.88□□□□□ -1.31
PRPF8-211ENST00000574728 WIPF1O43516 503 aa6.88□□□□□ -1.31
PRPF8-211ENST00000574728 KANK3Q6NY19 840 aa6.88□□□□□ -1.31
PRPF8-211ENST00000574728 ELMSAN1Q6PJG2 1045 aa6.88□□□□□ -1.31
PRPF8-211ENST00000574728 LYPD4Q6UWN0 246 aa6.88□□□□□ -1.31
PRPF8-211ENST00000574728 C1orf229Q6ZS94 237 aaPredicted RBP6.88□□□□□ -1.31
PRPF8-211ENST00000574728 MICALL1Q8N3F8 863 aa6.88□□□□□ -1.31
PRPF8-211ENST00000574728 DCAF11Q8TEB1 546 aa6.88□□□□□ -1.31
PRPF8-211ENST00000574728 FRRS1LQ9P0K9 344 aa6.88□□□□□ -1.31
PRPF8-211ENST00000574728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.88□□□□□ -1.31
PRPF8-211ENST00000574728 KNDC1Q76NI1 1749 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 COL16A1Q07092 1604 aaPredicted RBP6.87□□□□□ -1.31
PRPF8-211ENST00000574728 AHDC1Q5TGY3 1603 aaPredicted RBP6.87□□□□□ -1.31
PRPF8-211ENST00000574728 DLC1Q96QB1 1528 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 GADD45BO75293 160 aaPredicted RBP6.87□□□□□ -1.31
PRPF8-211ENST00000574728 AMPD1P23109 780 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 XPCQ01831 940 aaPredicted RBP6.87□□□□□ -1.31
PRPF8-211ENST00000574728 PERM1Q5SV97 790 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 PSAPL1Q6NUJ1 521 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 EPS8L3Q8TE67 593 aaKnown RBP6.87□□□□□ -1.31
PRPF8-211ENST00000574728 FRMD6Q96NE9 622 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 SETDB2Q96T68 719 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 OSMRQ99650 979 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 DUSP9Q99956 384 aaKnown RBP6.87□□□□□ -1.31
PRPF8-211ENST00000574728 ENAMQ9NRM1 1142 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 STK26Q9P289 416 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 NAGPAQ9UK23 515 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 LAMC1P11047 1609 aa6.87□□□□□ -1.31
PRPF8-211ENST00000574728 CDC42BPGQ6DT37 1551 aa6.86□□□□□ -1.31
PRPF8-211ENST00000574728 A0A1W2PP55 124 aa6.86□□□□□ -1.31
PRPF8-211ENST00000574728 RGS9O75916 674 aaPredicted RBP6.86□□□□□ -1.31
PRPF8-211ENST00000574728 SMNDC1O75940 238 aaKnown RBP eCLIP6.86□□□□□ -1.31
PRPF8-211ENST00000574728 ZNF16P17020 682 aaPredicted RBP6.86□□□□□ -1.31
PRPF8-211ENST00000574728 ATF3P18847 181 aa6.86□□□□□ -1.31
PRPF8-211ENST00000574728 IRS1P35568 1242 aa6.86□□□□□ -1.31
PRPF8-211ENST00000574728 TAGLNQ01995 201 aaKnown RBP6.86□□□□□ -1.31
PRPF8-211ENST00000574728 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms