RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 LIMCH1Q9UPQ0 1083 aa17.39■□□□□ 0.37
COMMD4-221ENST00000567935 DOCK2Q92608 1830 aa17.39■□□□□ 0.37
COMMD4-221ENST00000567935 ZNF804BA4D1E1 1349 aa17.39■□□□□ 0.37
COMMD4-221ENST00000567935 CYP2E1P05181 493 aaPredicted RBP17.38■□□□□ 0.37
COMMD4-221ENST00000567935 ALDH1B1P30837 517 aa17.38■□□□□ 0.37
COMMD4-221ENST00000567935 KIF23Q02241 960 aaPredicted RBP17.38■□□□□ 0.37
COMMD4-221ENST00000567935 MAP3K12Q12852 859 aa17.38■□□□□ 0.37
COMMD4-221ENST00000567935 RAB3GAP1Q15042 981 aa17.38■□□□□ 0.37
COMMD4-221ENST00000567935 WASHC4Q2M389 1173 aa17.38■□□□□ 0.37
COMMD4-221ENST00000567935 CAVIN4Q5BKX8 364 aa17.38■□□□□ 0.37
COMMD4-221ENST00000567935 TMED8Q6PL24 325 aaPredicted RBP17.38■□□□□ 0.37
COMMD4-221ENST00000567935 BLOC1S2Q6QNY1 142 aa17.38■□□□□ 0.37
COMMD4-221ENST00000567935 PDRG1Q9NUG6 133 aa17.38■□□□□ 0.37
COMMD4-221ENST00000567935 PGAP2Q9UHJ9 254 aa17.38■□□□□ 0.37
COMMD4-221ENST00000567935 PDS5AQ29RF7 1337 aaKnown RBP17.38■□□□□ 0.37
COMMD4-221ENST00000567935 PTMSP20962 102 aa17.37■□□□□ 0.37
COMMD4-221ENST00000567935 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-221ENST00000567935 GRAPQ13588 217 aa17.37■□□□□ 0.37
COMMD4-221ENST00000567935 RASGRF1Q13972 1273 aa17.37■□□□□ 0.37
COMMD4-221ENST00000567935 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
COMMD4-221ENST00000567935 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
COMMD4-221ENST00000567935 GBP4Q96PP9 640 aa17.37■□□□□ 0.37
COMMD4-221ENST00000567935 SEC62Q99442 399 aaKnown RBP17.37■□□□□ 0.37
COMMD4-221ENST00000567935 HSPD1P10809 573 aaKnown RBP17.36■□□□□ 0.37
COMMD4-221ENST00000567935 CRY2Q49AN0 593 aa17.36■□□□□ 0.37
COMMD4-221ENST00000567935 CCDC129Q6ZRS4 1044 aa17.36■□□□□ 0.37
COMMD4-221ENST00000567935 OSBP2Q969R2 916 aa17.36■□□□□ 0.37
COMMD4-221ENST00000567935 MKI67P46013 3256 aaKnown RBP17.36■□□□□ 0.37
COMMD4-221ENST00000567935 RPS6KB1P23443 525 aa17.35■□□□□ 0.37
COMMD4-221ENST00000567935 AK2P54819 239 aa17.35■□□□□ 0.37
COMMD4-221ENST00000567935 SLC9C2Q5TAH2 1124 aa17.35■□□□□ 0.37
COMMD4-221ENST00000567935 RGMBQ6NW40 437 aa17.35■□□□□ 0.37
COMMD4-221ENST00000567935 CDC37L1Q7L3B6 337 aa17.35■□□□□ 0.37
COMMD4-221ENST00000567935 TMC4Q7Z404 712 aa17.35■□□□□ 0.37
COMMD4-221ENST00000567935 NIM1KQ8IY84 436 aa17.35■□□□□ 0.37
COMMD4-221ENST00000567935 TRPM4Q8TD43 1214 aa17.35■□□□□ 0.37
COMMD4-221ENST00000567935 PIH1D3Q9NQM4 214 aaKnown RBP17.35■□□□□ 0.37
COMMD4-221ENST00000567935 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
COMMD4-221ENST00000567935 M0R2C6 588 aa17.34■□□□□ 0.37
COMMD4-221ENST00000567935 IDH1O75874 414 aaKnown RBP17.34■□□□□ 0.37
COMMD4-221ENST00000567935 PDIA4P13667 645 aaKnown RBP17.34■□□□□ 0.37
COMMD4-221ENST00000567935 PDE6AP16499 860 aa17.34■□□□□ 0.37
COMMD4-221ENST00000567935 GMPSP49915 693 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-221ENST00000567935 ADCK5Q3MIX3 580 aa17.34■□□□□ 0.37
COMMD4-221ENST00000567935 PI16Q6UXB8 463 aa17.34■□□□□ 0.37
COMMD4-221ENST00000567935 CLEC17AQ6ZS10 378 aa17.34■□□□□ 0.37
COMMD4-221ENST00000567935 RPGRQ92834 1020 aaKnown RBP17.34■□□□□ 0.37
COMMD4-221ENST00000567935 NEK1Q96PY6 1258 aa17.34■□□□□ 0.37
COMMD4-221ENST00000567935 LEMD3Q9Y2U8 911 aa17.34■□□□□ 0.37
COMMD4-221ENST00000567935 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-221ENST00000567935 TAF1P21675 1872 aa17.33■□□□□ 0.37
COMMD4-221ENST00000567935 COL4A1P02462 1669 aa17.33■□□□□ 0.37
COMMD4-221ENST00000567935 ZMYM6O95789 1325 aa17.33■□□□□ 0.36
COMMD4-221ENST00000567935 DDX11L8A8MPP1 907 aa17.33■□□□□ 0.36
COMMD4-221ENST00000567935 GPAA1O43292 621 aa17.33■□□□□ 0.36
COMMD4-221ENST00000567935 CYP21A2P08686 494 aa17.33■□□□□ 0.36
COMMD4-221ENST00000567935 BCAMP50895 628 aa17.33■□□□□ 0.36
COMMD4-221ENST00000567935 CC2D2BQ6DHV5 1058 aa17.33■□□□□ 0.36
COMMD4-221ENST00000567935 FBXO33Q7Z6M2 555 aa17.33■□□□□ 0.36
COMMD4-221ENST00000567935 USP48Q86UV5 1035 aa17.33■□□□□ 0.36
COMMD4-221ENST00000567935 VPS37DQ86XT2 251 aa17.33■□□□□ 0.36
COMMD4-221ENST00000567935 RBM17Q96I25 401 aaKnown RBP17.33■□□□□ 0.36
COMMD4-221ENST00000567935 TCRBV5S4A2TA0A5A2 114 aa17.32■□□□□ 0.36
COMMD4-221ENST00000567935 FRAT2O75474 233 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-221ENST00000567935 GNAT2P19087 354 aa17.32■□□□□ 0.36
COMMD4-221ENST00000567935 HOXA10P31260 410 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-221ENST00000567935 MCM4P33991 863 aa17.32■□□□□ 0.36
COMMD4-221ENST00000567935 CXCL9Q07325 125 aa17.32■□□□□ 0.36
COMMD4-221ENST00000567935 IMMTQ16891 758 aaKnown RBP17.32■□□□□ 0.36
COMMD4-221ENST00000567935 ZC3H15Q8WU90 426 aaKnown RBP17.32■□□□□ 0.36
COMMD4-221ENST00000567935 CHMP4CQ96CF2 233 aa17.32■□□□□ 0.36
COMMD4-221ENST00000567935 CSRNP1Q96S65 589 aa17.32■□□□□ 0.36
COMMD4-221ENST00000567935 FOXD4L1Q9NU39 408 aa17.32■□□□□ 0.36
COMMD4-221ENST00000567935 ZNF532Q9HCE3 1301 aa17.31■□□□□ 0.36
COMMD4-221ENST00000567935 PPIP5K2O43314 1243 aa17.31■□□□□ 0.36
COMMD4-221ENST00000567935 BBOX1O75936 387 aa17.31■□□□□ 0.36
COMMD4-221ENST00000567935 CHGBP05060 677 aa17.31■□□□□ 0.36
COMMD4-221ENST00000567935 ALX1Q15699 326 aa17.31■□□□□ 0.36
COMMD4-221ENST00000567935 AOC3Q16853 763 aa17.31■□□□□ 0.36
COMMD4-221ENST00000567935 C15orf52Q6ZUT6 534 aaKnown RBP17.31■□□□□ 0.36
COMMD4-221ENST00000567935 CRAMP1Q96RY5 1269 aa17.31■□□□□ 0.36
COMMD4-221ENST00000567935 PUS7LQ9H0K6 701 aaKnown RBP17.31■□□□□ 0.36
COMMD4-221ENST00000567935 XDHP47989 1333 aa17.3■□□□□ 0.36
COMMD4-221ENST00000567935 SHTN1A0MZ66 631 aa17.3■□□□□ 0.36
COMMD4-221ENST00000567935 ZNF157P51786 506 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-221ENST00000567935 DHX32Q7L7V1 743 aaKnown RBP17.3■□□□□ 0.36
COMMD4-221ENST00000567935 ZGPATQ8N5A5 531 aaKnown RBP17.3■□□□□ 0.36
COMMD4-221ENST00000567935 TNPO1Q92973 898 aaKnown RBP17.3■□□□□ 0.36
COMMD4-221ENST00000567935 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
COMMD4-221ENST00000567935 FAM84BQ96KN1 310 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-221ENST00000567935 GBA2Q9HCG7 927 aaPredicted RBP17.3■□□□□ 0.36
COMMD4-221ENST00000567935 MYO5AQ9Y4I1 1855 aaKnown RBP17.29■□□□□ 0.36
COMMD4-221ENST00000567935 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
COMMD4-221ENST00000567935 SNAP23O00161 211 aa17.29■□□□□ 0.36
COMMD4-221ENST00000567935 DLL1O00548 723 aa17.29■□□□□ 0.36
COMMD4-221ENST00000567935 HIBADHP31937 336 aaKnown RBP17.29■□□□□ 0.36
COMMD4-221ENST00000567935 PKN2Q16513 984 aaKnown RBP17.29■□□□□ 0.36
COMMD4-221ENST00000567935 FBXL16Q8N461 479 aa17.29■□□□□ 0.36
COMMD4-221ENST00000567935 LRP2BPQ9P2M1 347 aa17.29■□□□□ 0.36
COMMD4-221ENST00000567935 MYH13Q9UKX3 1938 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms