RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ANKRD23Q86SG2 305 aa16.1■□□□□ 0.17
RNF40-208ENST00000565995 SHISA4Q96DD7 197 aa16.1■□□□□ 0.17
RNF40-208ENST00000565995 SRRDQ9UH36 339 aa16.1■□□□□ 0.17
RNF40-208ENST00000565995 KCNH4Q9UQ05 1017 aa16.1■□□□□ 0.17
RNF40-208ENST00000565995 MAST3O60307 1309 aa16.1■□□□□ 0.17
RNF40-208ENST00000565995 COL6A3P12111 3177 aa16.09■□□□□ 0.17
RNF40-208ENST00000565995 NBPF7P0C2Y1 421 aaPredicted RBP16.09■□□□□ 0.17
RNF40-208ENST00000565995 CACNB3P54284 484 aa16.09■□□□□ 0.17
RNF40-208ENST00000565995 DCAF15Q66K64 600 aa16.09■□□□□ 0.17
RNF40-208ENST00000565995 VPS37DQ86XT2 251 aa16.09■□□□□ 0.17
RNF40-208ENST00000565995 ZNF341Q9BYN7 854 aa16.09■□□□□ 0.17
RNF40-208ENST00000565995 TMOD2Q9NZR1 351 aa16.09■□□□□ 0.17
RNF40-208ENST00000565995 DOCK1Q14185 1865 aa16.08■□□□□ 0.17
RNF40-208ENST00000565995 FGFR2P21802 821 aa16.08■□□□□ 0.16
RNF40-208ENST00000565995 MOGSQ13724 837 aa16.08■□□□□ 0.16
RNF40-208ENST00000565995 LRRC24Q50LG9 513 aa16.08■□□□□ 0.16
RNF40-208ENST00000565995 NKX2-3Q8TAU0 364 aa16.08■□□□□ 0.16
RNF40-208ENST00000565995 TRIM47Q96LD4 638 aa16.08■□□□□ 0.16
RNF40-208ENST00000565995 PRO3102Q9H379 93 aa16.08■□□□□ 0.16
RNF40-208ENST00000565995 SPINK5Q9NQ38 1064 aaPredicted RBP16.08■□□□□ 0.16
RNF40-208ENST00000565995 IQSEC3Q9UPP2 1182 aaPredicted RBP16.08■□□□□ 0.16
RNF40-208ENST00000565995 HOXD10P28358 340 aa16.07■□□□□ 0.16
RNF40-208ENST00000565995 PSMC4P43686 418 aa16.07■□□□□ 0.16
RNF40-208ENST00000565995 GJA8P48165 433 aa16.07■□□□□ 0.16
RNF40-208ENST00000565995 MTFR1Q15390 333 aa16.07■□□□□ 0.16
RNF40-208ENST00000565995 ANKRD44Q8N8A2 993 aa16.07■□□□□ 0.16
RNF40-208ENST00000565995 FAM151AQ8WW52 585 aa16.07■□□□□ 0.16
RNF40-208ENST00000565995 BICC1Q9H694 974 aaKnown RBP16.07■□□□□ 0.16
RNF40-208ENST00000565995 ATAD5Q96QE3 1844 aa16.07■□□□□ 0.16
RNF40-208ENST00000565995 GJB1P08034 283 aa16.06■□□□□ 0.16
RNF40-208ENST00000565995 CAPN2P17655 700 aa16.06■□□□□ 0.16
RNF40-208ENST00000565995 OSBPP22059 807 aa16.06■□□□□ 0.16
RNF40-208ENST00000565995 GRK4P32298 578 aa16.06■□□□□ 0.16
RNF40-208ENST00000565995 BCAMP50895 628 aa16.06■□□□□ 0.16
RNF40-208ENST00000565995 CHAF1AQ13111 956 aaPredicted RBP16.06■□□□□ 0.16
RNF40-208ENST00000565995 NOL9Q5SY16 702 aaKnown RBP16.06■□□□□ 0.16
RNF40-208ENST00000565995 SLC4A10Q6U841 1118 aa16.06■□□□□ 0.16
RNF40-208ENST00000565995 PDHXO00330 501 aa16.05■□□□□ 0.16
RNF40-208ENST00000565995 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
RNF40-208ENST00000565995 MYCP01106 439 aaPredicted RBP16.05■□□□□ 0.16
RNF40-208ENST00000565995 INPP5BP32019 993 aa16.05■□□□□ 0.16
RNF40-208ENST00000565995 METTL24Q5JXM2 366 aa16.05■□□□□ 0.16
RNF40-208ENST00000565995 MIGA2Q7L4E1 593 aa16.05■□□□□ 0.16
RNF40-208ENST00000565995 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.05■□□□□ 0.16
RNF40-208ENST00000565995 RBM27Q9P2N5 1060 aaKnown RBP16.05■□□□□ 0.16
RNF40-208ENST00000565995 CPA4Q9UI42 421 aa16.05■□□□□ 0.16
RNF40-208ENST00000565995 ZBTB22O15209 634 aa16.04■□□□□ 0.16
RNF40-208ENST00000565995 BCRP11274 1271 aa16.04■□□□□ 0.16
RNF40-208ENST00000565995 CHRDL2Q6WN34 429 aa16.04■□□□□ 0.16
RNF40-208ENST00000565995 WDR66Q8TBY9 1149 aa16.04■□□□□ 0.16
RNF40-208ENST00000565995 LAMA3Q16787 3333 aa16.04■□□□□ 0.16
RNF40-208ENST00000565995 MYPNQ86TC9 1320 aa16.03■□□□□ 0.16
RNF40-208ENST00000565995 CXCL11O14625 94 aa16.03■□□□□ 0.16
RNF40-208ENST00000565995 CCL5P13501 91 aa16.03■□□□□ 0.16
RNF40-208ENST00000565995 PUM3Q15397 648 aaKnown RBP16.03■□□□□ 0.16
RNF40-208ENST00000565995 GPAT2Q6NUI2 795 aa16.03■□□□□ 0.16
RNF40-208ENST00000565995 RAET1EQ8TD07 263 aa16.03■□□□□ 0.16
RNF40-208ENST00000565995 DPF3Q92784 378 aa16.03■□□□□ 0.16
RNF40-208ENST00000565995 HTATIP2Q9BUP3 242 aa16.03■□□□□ 0.16
RNF40-208ENST00000565995 A0A0C4DFX4 3053 aa16.02■□□□□ 0.16
RNF40-208ENST00000565995 FMNL1O95466 1100 aaPredicted RBP16.02■□□□□ 0.16
RNF40-208ENST00000565995 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.16
RNF40-208ENST00000565995 MAP3K10Q02779 954 aa16.02■□□□□ 0.16
RNF40-208ENST00000565995 CDC42EP5Q6NZY7 148 aa16.02■□□□□ 0.16
RNF40-208ENST00000565995 DAGLAQ9Y4D2 1042 aa16.02■□□□□ 0.16
RNF40-208ENST00000565995 LOC285556D6RIA3 1793 aa16.02■□□□□ 0.15
RNF40-208ENST00000565995 PLXNB2O15031 1838 aa16.01■□□□□ 0.15
RNF40-208ENST00000565995 SLAIN1Q8ND83 568 aa16.01■□□□□ 0.15
RNF40-208ENST00000565995 USP44Q9H0E7 712 aa16.01■□□□□ 0.15
RNF40-208ENST00000565995 FAM198AQ9UFP1 575 aa16.01■□□□□ 0.15
RNF40-208ENST00000565995 SLC45A1Q9Y2W3 748 aa16.01■□□□□ 0.15
RNF40-208ENST00000565995 ATRNL1Q5VV63 1379 aa16■□□□□ 0.15
RNF40-208ENST00000565995 SALL1Q9NSC2 1324 aa16■□□□□ 0.15
RNF40-208ENST00000565995 A0A1W2PPC1 479 aa16■□□□□ 0.15
RNF40-208ENST00000565995 PHF20L1A8MW92 1017 aa16■□□□□ 0.15
RNF40-208ENST00000565995 SGPL1O95470 568 aa16■□□□□ 0.15
RNF40-208ENST00000565995 RFX5P48382 616 aaPredicted RBP16■□□□□ 0.15
RNF40-208ENST00000565995 UBXN2AP68543 259 aa16■□□□□ 0.15
RNF40-208ENST00000565995 KLHDC4Q8TBB5 520 aa16■□□□□ 0.15
RNF40-208ENST00000565995 LPIN2Q92539 896 aa16■□□□□ 0.15
RNF40-208ENST00000565995 PARK7Q99497 189 aaKnown RBP16■□□□□ 0.15
RNF40-208ENST00000565995 RNF208Q9H0X6 261 aa16■□□□□ 0.15
RNF40-208ENST00000565995 MRS2Q9HD23 443 aa16■□□□□ 0.15
RNF40-208ENST00000565995 SALL2Q9Y467 1007 aaPredicted RBP16■□□□□ 0.15
RNF40-208ENST00000565995 CDK5RAP2Q96SN8 1893 aa15.99■□□□□ 0.15
RNF40-208ENST00000565995 PTPRCP08575 1304 aa15.99■□□□□ 0.15
RNF40-208ENST00000565995 A0A0G2JLL6 359 aaPredicted RBP15.99■□□□□ 0.15
RNF40-208ENST00000565995 EYA2O00167 538 aa15.99■□□□□ 0.15
RNF40-208ENST00000565995 ZBTB7BO15156 539 aaPredicted RBP15.99■□□□□ 0.15
RNF40-208ENST00000565995 FCGRTP55899 365 aa15.99■□□□□ 0.15
RNF40-208ENST00000565995 PRKCZQ05513 592 aa15.99■□□□□ 0.15
RNF40-208ENST00000565995 NFIAQ12857 509 aa15.99■□□□□ 0.15
RNF40-208ENST00000565995 PRRT2Q7Z6L0 340 aaPredicted RBP15.99■□□□□ 0.15
RNF40-208ENST00000565995 MRPL50Q8N5N7 158 aaKnown RBP15.99■□□□□ 0.15
RNF40-208ENST00000565995 PXYLP1Q8TE99 480 aa15.99■□□□□ 0.15
RNF40-208ENST00000565995 U2AF1L4Q8WU68 220 aaKnown RBP15.99■□□□□ 0.15
RNF40-208ENST00000565995 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
RNF40-208ENST00000565995 NR2E3Q9Y5X4 410 aa15.99■□□□□ 0.15
RNF40-208ENST00000565995 SLC5A1P13866 664 aa15.98■□□□□ 0.15
RNF40-208ENST00000565995 TCP10Q12799 353 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms