RNA–Protein interactions for RNA: ENST00000565922.1

CMTM3-211, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CMTM3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-211ENST00000565922 LDLRAD1Q5T700 205 aa24.35■■□□□ 1.49
CMTM3-211ENST00000565922 KIF1BPQ96EK5 621 aa24.35■■□□□ 1.49
CMTM3-211ENST00000565922 PRDM10Q9NQV6 1147 aa24.35■■□□□ 1.49
CMTM3-211ENST00000565922 GAKO14976 1311 aa24.35■■□□□ 1.49
CMTM3-211ENST00000565922 IGSF3O75054 1194 aa24.34■■□□□ 1.49
CMTM3-211ENST00000565922 GSTO1P78417 241 aa24.34■■□□□ 1.49
CMTM3-211ENST00000565922 KIF23Q02241 960 aaPredicted RBP24.34■■□□□ 1.49
CMTM3-211ENST00000565922 TEPSINQ96N21 525 aa24.34■■□□□ 1.49
CMTM3-211ENST00000565922 TMEM39BQ9GZU3 492 aa24.34■■□□□ 1.49
CMTM3-211ENST00000565922 DBNLQ9UJU6 430 aaKnown RBP24.34■■□□□ 1.49
CMTM3-211ENST00000565922 MYO5AQ9Y4I1 1855 aaKnown RBP24.34■■□□□ 1.49
CMTM3-211ENST00000565922 RAB11FIP3O75154 756 aa24.33■■□□□ 1.49
CMTM3-211ENST00000565922 CACNB3P54284 484 aa24.33■■□□□ 1.49
CMTM3-211ENST00000565922 RHPN1Q8TCX5 695 aa24.33■■□□□ 1.49
CMTM3-211ENST00000565922 EAF2Q96CJ1 260 aaPredicted RBP24.33■■□□□ 1.49
CMTM3-211ENST00000565922 FAM163AQ96GL9 167 aaPredicted RBP24.33■■□□□ 1.49
CMTM3-211ENST00000565922 DOCK2Q92608 1830 aa24.33■■□□□ 1.48
CMTM3-211ENST00000565922 LDHCP07864 332 aa24.32■■□□□ 1.48
CMTM3-211ENST00000565922 CDC42EP5Q6NZY7 148 aa24.32■■□□□ 1.48
CMTM3-211ENST00000565922 PI16Q6UXB8 463 aa24.32■■□□□ 1.48
CMTM3-211ENST00000565922 ANKRD13AQ8IZ07 590 aa24.32■■□□□ 1.48
CMTM3-211ENST00000565922 CLASRPQ8N2M8 674 aaKnown RBP24.32■■□□□ 1.48
CMTM3-211ENST00000565922 CCDC8Q9H0W5 538 aaPredicted RBP24.32■■□□□ 1.48
CMTM3-211ENST00000565922 MROH7-TTC4A0A0A0MT08 1334 aa24.32■■□□□ 1.48
CMTM3-211ENST00000565922 HSPA8P11142 646 aaKnown RBP24.31■■□□□ 1.48
CMTM3-211ENST00000565922 RRP1P56182 461 aaKnown RBP24.31■■□□□ 1.48
CMTM3-211ENST00000565922 MECOMQ03112 1051 aa24.31■■□□□ 1.48
CMTM3-211ENST00000565922 AACSQ86V21 672 aa24.31■■□□□ 1.48
CMTM3-211ENST00000565922 SIRT2Q8IXJ6 389 aa24.31■■□□□ 1.48
CMTM3-211ENST00000565922 FAM151AQ8WW52 585 aa24.31■■□□□ 1.48
CMTM3-211ENST00000565922 SLC10A4Q96EP9 437 aa24.31■■□□□ 1.48
CMTM3-211ENST00000565922 ZIC5Q96T25 663 aa24.31■■□□□ 1.48
CMTM3-211ENST00000565922 USP40Q9NVE5 1235 aa24.31■■□□□ 1.48
CMTM3-211ENST00000565922 RAI14Q9P0K7 980 aa24.31■■□□□ 1.48
CMTM3-211ENST00000565922 LRP2BPQ9P2M1 347 aa24.31■■□□□ 1.48
CMTM3-211ENST00000565922 USP2O75604 605 aaPredicted RBP24.3■■□□□ 1.48
CMTM3-211ENST00000565922 SAGE1Q9NXZ1 904 aa24.3■■□□□ 1.48
CMTM3-211ENST00000565922 FZD1Q9UP38 647 aa24.3■■□□□ 1.48
CMTM3-211ENST00000565922 LBX1P52954 281 aa24.29■■□□□ 1.48
CMTM3-211ENST00000565922 DCAF15Q66K64 600 aa24.29■■□□□ 1.48
CMTM3-211ENST00000565922 NSUN4Q96CB9 384 aaKnown RBP24.29■■□□□ 1.48
CMTM3-211ENST00000565922 TLR7Q9NYK1 1049 aaKnown RBP24.29■■□□□ 1.48
CMTM3-211ENST00000565922 MAP4K4O95819 1239 aaPredicted RBP24.28■■□□□ 1.48
CMTM3-211ENST00000565922 ZBTB48P10074 688 aaPredicted RBP24.28■■□□□ 1.48
CMTM3-211ENST00000565922 SREBF2Q12772 1141 aa24.28■■□□□ 1.48
CMTM3-211ENST00000565922 COL13A1Q5TAT6 717 aaPredicted RBP24.28■■□□□ 1.48
CMTM3-211ENST00000565922 TBC1D9Q6ZT07 1266 aa24.28■■□□□ 1.48
CMTM3-211ENST00000565922 CSRNP1Q96S65 589 aa24.28■■□□□ 1.48
CMTM3-211ENST00000565922 IL1RAPL2Q9NP60 686 aa24.28■■□□□ 1.48
CMTM3-211ENST00000565922 BTDP43251 543 aa24.27■■□□□ 1.48
CMTM3-211ENST00000565922 NOL10Q9BSC4 688 aaKnown RBP24.27■■□□□ 1.48
CMTM3-211ENST00000565922 IDI2Q9BXS1 227 aa24.27■■□□□ 1.48
CMTM3-211ENST00000565922 SNRKQ9NRH2 765 aa24.27■■□□□ 1.48
CMTM3-211ENST00000565922 GPR75-ASB3A0A0A6YYF3 556 aa24.26■■□□□ 1.47
CMTM3-211ENST00000565922 APBB1O00213 710 aa24.26■■□□□ 1.47
CMTM3-211ENST00000565922 ENTPD3O75355 529 aa24.26■■□□□ 1.47
CMTM3-211ENST00000565922 IFIT2P09913 472 aaKnown RBP24.26■■□□□ 1.47
CMTM3-211ENST00000565922 TCP10Q12799 353 aa24.26■■□□□ 1.47
CMTM3-211ENST00000565922 SPRYD7Q5W111 196 aa24.26■■□□□ 1.47
CMTM3-211ENST00000565922 CDAN1Q8IWY9 1227 aa24.26■■□□□ 1.47
CMTM3-211ENST00000565922 CSADQ9Y600 493 aa24.26■■□□□ 1.47
CMTM3-211ENST00000565922 CYP2E1P05181 493 aaPredicted RBP24.25■■□□□ 1.47
CMTM3-211ENST00000565922 NFIAQ12857 509 aa24.25■■□□□ 1.47
CMTM3-211ENST00000565922 NAA16Q6N069 864 aaPredicted RBP24.25■■□□□ 1.47
CMTM3-211ENST00000565922 RFX7Q2KHR2 1363 aa24.25■■□□□ 1.47
CMTM3-211ENST00000565922 FOCADQ5VW36 1801 aa24.24■■□□□ 1.47
CMTM3-211ENST00000565922 CDK5RAP2Q96SN8 1893 aa24.24■■□□□ 1.47
CMTM3-211ENST00000565922 MANSC4A6NHS7 340 aaPredicted RBP24.24■■□□□ 1.47
CMTM3-211ENST00000565922 ZAP70P43403 619 aa24.24■■□□□ 1.47
CMTM3-211ENST00000565922 MAP3K9P80192 1104 aa24.24■■□□□ 1.47
CMTM3-211ENST00000565922 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.24■■□□□ 1.47
CMTM3-211ENST00000565922 WNK4Q96J92 1243 aa24.24■■□□□ 1.47
CMTM3-211ENST00000565922 CLMNQ96JQ2 1002 aa24.24■■□□□ 1.47
CMTM3-211ENST00000565922 FAM198AQ9UFP1 575 aa24.24■■□□□ 1.47
CMTM3-211ENST00000565922 CASP8AP2Q9UKL3 1982 aa24.23■■□□□ 1.47
CMTM3-211ENST00000565922 BAG3O95817 575 aa24.23■■□□□ 1.47
CMTM3-211ENST00000565922 TM4SF4P48230 202 aa24.23■■□□□ 1.47
CMTM3-211ENST00000565922 RGS3P49796 1198 aa24.23■■□□□ 1.47
CMTM3-211ENST00000565922 INHBEP58166 350 aa24.23■■□□□ 1.47
CMTM3-211ENST00000565922 MKRN3Q13064 507 aaKnown RBP24.23■■□□□ 1.47
CMTM3-211ENST00000565922 TMED8Q6PL24 325 aaPredicted RBP24.23■■□□□ 1.47
CMTM3-211ENST00000565922 ZNF384Q8TF68 577 aa24.23■■□□□ 1.47
CMTM3-211ENST00000565922 ZNF341Q9BYN7 854 aa24.23■■□□□ 1.47
CMTM3-211ENST00000565922 LRRCC1Q9C099 1032 aa24.23■■□□□ 1.47
CMTM3-211ENST00000565922 NPM3O75607 178 aaKnown RBP24.22■■□□□ 1.47
CMTM3-211ENST00000565922 PLCG2P16885 1265 aa24.22■■□□□ 1.47
CMTM3-211ENST00000565922 TNS4Q8IZW8 715 aa24.22■■□□□ 1.47
CMTM3-211ENST00000565922 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.22■■□□□ 1.47
CMTM3-211ENST00000565922 RNF186Q9NXI6 227 aa24.22■■□□□ 1.47
CMTM3-211ENST00000565922 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.22■■□□□ 1.47
CMTM3-211ENST00000565922 TSKSQ9UJT2 592 aa24.22■■□□□ 1.47
CMTM3-211ENST00000565922 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.21■■□□□ 1.47
CMTM3-211ENST00000565922 WRNIP1Q96S55 665 aa24.21■■□□□ 1.47
CMTM3-211ENST00000565922 WDHD1O75717 1129 aaPredicted RBP24.2■■□□□ 1.46
CMTM3-211ENST00000565922 TRPA1O75762 1119 aa24.2■■□□□ 1.46
CMTM3-211ENST00000565922 RHBDL3P58872 404 aa24.2■■□□□ 1.46
CMTM3-211ENST00000565922 VGLL4Q14135 290 aa24.2■■□□□ 1.46
CMTM3-211ENST00000565922 TTF1Q15361 905 aaPredicted RBP24.2■■□□□ 1.46
CMTM3-211ENST00000565922 CERS3Q8IU89 383 aa24.2■■□□□ 1.46
CMTM3-211ENST00000565922 ZSCAN29Q8IWY8 852 aaPredicted RBP24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms