RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 EXOC6BQ9Y2D4 811 aa13.69□□□□□ -0.22
LPCAT4-202ENST00000562404 DOCK2Q92608 1830 aa13.69□□□□□ -0.22
LPCAT4-202ENST00000562404 GAKO14976 1311 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 CAPN15O75808 1086 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 FAM83AQ86UY5 434 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 SPATA5Q8NB90 893 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 CNKSR2Q8WXI2 1034 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 EAF2Q96CJ1 260 aaPredicted RBP13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 SLC10A4Q96EP9 437 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 WNK4Q96J92 1243 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 GPR108Q9NPR9 543 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 ZBTB40Q9NUA8 1239 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 FAM198AQ9UFP1 575 aa13.68□□□□□ -0.22
LPCAT4-202ENST00000562404 TM4SF4P48230 202 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 TNNI2P48788 182 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 MECOMQ03112 1051 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 TCP10Q12799 353 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 OS9Q13438 667 aaPredicted RBP13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 FKBP1CQ5VVH2 108 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 CCDC8Q9H0W5 538 aaPredicted RBP13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 R3HDMLQ9H3Y0 253 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 SNRKQ9NRH2 765 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 USP40Q9NVE5 1235 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 SAGE1Q9NXZ1 904 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 DBNLQ9UJU6 430 aaKnown RBP13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 MAST2Q6P0Q8 1798 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 RFX7Q2KHR2 1363 aa13.67□□□□□ -0.22
LPCAT4-202ENST00000562404 TBC1D8O95759 1140 aa13.66□□□□□ -0.22
LPCAT4-202ENST00000562404 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
LPCAT4-202ENST00000562404 IREB2P48200 963 aaKnown RBP13.66□□□□□ -0.22
LPCAT4-202ENST00000562404 GORABQ5T7V8 394 aa13.66□□□□□ -0.22
LPCAT4-202ENST00000562404 ANKRD13AQ8IZ07 590 aa13.66□□□□□ -0.22
LPCAT4-202ENST00000562404 FAM151AQ8WW52 585 aa13.66□□□□□ -0.22
LPCAT4-202ENST00000562404 ELP3Q9H9T3 547 aa13.66□□□□□ -0.22
LPCAT4-202ENST00000562404 TMOD2Q9NZR1 351 aa13.66□□□□□ -0.22
LPCAT4-202ENST00000562404 RPAP1Q9BWH6 1393 aaPredicted RBP13.66□□□□□ -0.22
LPCAT4-202ENST00000562404 MS4A1P11836 297 aa13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 VGLL4Q14135 290 aa13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 MIGA2Q7L4E1 593 aa13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 SH3BP5LQ7L8J4 393 aa13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 DZIP1Q86YF9 867 aaKnown RBP13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 ZGPATQ8N5A5 531 aaKnown RBP13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 NSUN4Q96CB9 384 aaKnown RBP13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 FAM163AQ96GL9 167 aaPredicted RBP13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 DDX4Q9NQI0 724 aaKnown RBP13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 DDX19BQ9UMR2 479 aa13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 NDUFB9Q9Y6M9 179 aa13.65□□□□□ -0.22
LPCAT4-202ENST00000562404 MROH7-TTC4A0A0A0MT08 1334 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 SIPA1L1O43166 1804 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 FOCADQ5VW36 1801 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 ATRNL1Q5VV63 1379 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 UNCXA6NJT0 531 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 IGF2BP3O00425 579 aaKnown RBP eCLIP13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 WDHD1O75717 1129 aaPredicted RBP13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 CYP2E1P05181 493 aaPredicted RBP13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 ZBTB48P10074 688 aaPredicted RBP13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 BTDP43251 543 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 RGS3P49796 1198 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 RHBDL3P58872 404 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 MAP3K9P80192 1104 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 TTC39AQ5SRH9 613 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 REM2Q8IYK8 340 aaPredicted RBP13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 ZKSCAN4Q969J2 545 aaPredicted RBP13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 OPTNQ96CV9 577 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 PTPN18Q99952 460 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 SNCAIPQ9Y6H5 919 aa13.64□□□□□ -0.23
LPCAT4-202ENST00000562404 GPR75-ASB3A0A0A6YYF3 556 aa13.63□□□□□ -0.23
LPCAT4-202ENST00000562404 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
LPCAT4-202ENST00000562404 INPP5BP32019 993 aa13.63□□□□□ -0.23
LPCAT4-202ENST00000562404 ZAP70P43403 619 aa13.63□□□□□ -0.23
LPCAT4-202ENST00000562404 SPTY2D1Q68D10 685 aaPredicted RBP13.63□□□□□ -0.23
LPCAT4-202ENST00000562404 IDI2Q9BXS1 227 aa13.63□□□□□ -0.23
LPCAT4-202ENST00000562404 IL1RAPL2Q9NP60 686 aa13.63□□□□□ -0.23
LPCAT4-202ENST00000562404 PHIPQ8WWQ0 1821 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 DDTLA6NHG4 134 aaPredicted RBP13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 MANSC4A6NHS7 340 aaPredicted RBP13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 APBB1O00213 710 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 SREBF2Q12772 1141 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 PDE3AQ14432 1141 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 CCDC158Q5M9N0 1113 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 ADGRA1Q86SQ6 560 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 IFNL1Q8IU54 200 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 RPAP2Q8IXW5 612 aaPredicted RBP13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 RHPN1Q8TCX5 695 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 ABHD8Q96I13 439 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 MS4A4AQ96JQ5 239 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 ZNF512BQ96KM6 892 aaPredicted RBP13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 WRNIP1Q96S55 665 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 MCOLN1Q9GZU1 580 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 PIH1D3Q9NQM4 214 aaKnown RBP13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 RAI14Q9P0K7 980 aa13.62□□□□□ -0.23
LPCAT4-202ENST00000562404 PTPRFP10586 1907 aa13.61□□□□□ -0.23
LPCAT4-202ENST00000562404 PICALMQ13492 652 aa13.61□□□□□ -0.23
LPCAT4-202ENST00000562404 AACSQ86V21 672 aa13.61□□□□□ -0.23
LPCAT4-202ENST00000562404 ZNF296Q8WUU4 475 aaPredicted RBP13.61□□□□□ -0.23
LPCAT4-202ENST00000562404 ANTXR1Q9H6X2 564 aa13.61□□□□□ -0.23
LPCAT4-202ENST00000562404 ZNF112Q9UJU3 913 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms